Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_D05
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    27   0.41 
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            27   0.55 
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   2.9  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   8.9  

>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 27.5 bits (58), Expect = 0.41
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 628 PFRSPSSRTGSCEWIRSCQYWR 563
           P ++PS   G+CE +++C Y R
Sbjct: 30  PCQTPSGTAGTCEPVKNCSYVR 51


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 27.1 bits (57), Expect = 0.55
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -2

Query: 500 YSSSTQAPIRPVAVSFFITSKGNRPSKSCFAAFGFKYLSANSLDN 366
           Y + TQ  +R ++V  F  S   R SK C ++     L  N++DN
Sbjct: 180 YLNLTQNRLRDLSVFHFSASLSTRLSKKCGSSIVTLDLPQNTIDN 224


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 344 SVS*LVKLLHWDANAFTQDDESKLLSLID 258
           S++ L+   H+   A+T DD  +LLS ID
Sbjct: 302 SIATLMSNEHFHDIAYTADDREELLSAID 330


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 534 RRRGGAVPGLRQYW 575
           RR+GG  P  R YW
Sbjct: 260 RRKGGPYPRRRAYW 273


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,704
Number of Sequences: 2352
Number of extensions: 11670
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)