Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_C23
(698 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 29 0.19
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 26 1.3
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 26 1.3
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 25 3.0
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 24 4.0
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 24 5.3
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 24 5.3
AJ618920-1|CAF01999.1| 204|Anopheles gambiae putative odorant-b... 23 7.0
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 9.2
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 28.7 bits (61), Expect = 0.19
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Frame = +2
Query: 251 LRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQ------QLDNLRAQSFNMEQANYA 412
++K +D + K + GP K VLK ++M Q QL +R QS + + + A
Sbjct: 168 IQKAEDLIQKDKVGPRVLESAAKFCEVLKGREMQRQFRLEQEQLQQMRKQSVDTQTLSQA 227
Query: 413 TQTLKDTHTTISAMKDGVTQMKKEFKKINI 502
LK + + K+E K+ I
Sbjct: 228 NHWLKSHGDRLLEDRQRFDNYKRELKETMI 257
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 25.8 bits (54), Expect = 1.3
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -1
Query: 533 LTHHLHHQWNQY*SS*ILFSFXLHHPSLQILWYECPSMSALHN 405
L HH HH + + +HHP+ L Y+ + +A+H+
Sbjct: 116 LNHHQHHHQHPHLPHVQQHHPSVHHPAHHPLHYQPAAAAAMHH 158
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 25.8 bits (54), Expect = 1.3
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Frame = +2
Query: 227 KVQKLDTELRKYK-DQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQA 403
K+ + E ++ K DQ+SK +E K++A VLK+KK ++ R + ++
Sbjct: 237 KLYHNEKEAKRLKEDQISKQQELNIIEKRKEEADEVLKEKKKEVGKM--TREMAKKEQEI 294
Query: 404 NYATQTLKDTHTTISAMKDGV--TQMKKEFKKINIDSIDDVND-ELADMMEQADEVQE 568
+ H K+ V TQ K + ++ ++ AD+ + DE+QE
Sbjct: 295 REVEAEMSKRHPMFIKAKEKVAHTQKKLDGALKTLEQARRADEAHQADIKKLVDELQE 352
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 24.6 bits (51), Expect = 3.0
Identities = 25/126 (19%), Positives = 55/126 (43%)
Frame = +2
Query: 191 KNVDGRADXIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDN 370
KNV+ E+ +++ ++L+K + SK E A V KA QL+
Sbjct: 10 KNVEDEEH--ERLIEEFISKLKKSYKKASKAEENEAPRKVSHKA------------QLER 55
Query: 371 LRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDELADMMEQ 550
+ + N+E + + + +M ++++KK+ K+ + I+ + +++ E
Sbjct: 56 FKNYANNLEIEDLRDGMIAQMIEFMESMIKEMSELKKQLKQKSTQEIEVQTAQPSELAED 115
Query: 551 ADEVQE 568
A V +
Sbjct: 116 APFVPQ 121
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 24.2 bits (50), Expect = 4.0
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 17/115 (14%)
Frame = +2
Query: 191 KNVDGRADXIEQ----KVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMR--VLKQKKMY 352
KNVD + I + KV+ L T++ Q+ K+ +K +V+ K V K K
Sbjct: 878 KNVDRYTEQINEITNSKVKVLQTKINGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKI 937
Query: 353 EQQLDNLRAQSFNM-----------EQANYATQTLKDTHTTISAMKDGVTQMKKE 484
D + A + E+AN + L++ I +G + +KKE
Sbjct: 938 NSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHEGSSSIKKE 992
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.8 bits (49), Expect = 5.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 557 HQLVPSYQLTHHLHHQ 510
HQ +QL HH HHQ
Sbjct: 95 HQHPHHHQLPHHPHHQ 110
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.8 bits (49), Expect = 5.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 557 HQLVPSYQLTHHLHHQ 510
HQ +QL HH HHQ
Sbjct: 95 HQHPHHHQLPHHPHHQ 110
>AJ618920-1|CAF01999.1| 204|Anopheles gambiae putative
odorant-binding protein OBPjj4 protein.
Length = 204
Score = 23.4 bits (48), Expect = 7.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 437 TTISAMKDGVTQMKKEFKK 493
T + KDG TQ+K + KK
Sbjct: 168 TNVWTQKDGCTQLKDKIKK 186
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 23.0 bits (47), Expect = 9.2
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 251 LRKYKDQMSKMREGPAK--NSVKQKAMRVLKQKKMYEQQLDNL 373
L Y Q + ++ A + KQK + KQ K + QLD L
Sbjct: 379 LPSYTQQQQQQQQSAAAPPSYWKQKKLPTKKQHKQLQAQLDKL 421
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,161
Number of Sequences: 2352
Number of extensions: 11394
Number of successful extensions: 33
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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