Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_C22
(734 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 448 e-126
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 444 e-125
SB_56| Best HMM Match : Actin (HMM E-Value=0) 444 e-125
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 442 e-124
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 340 8e-94
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 237 5e-63
SB_54| Best HMM Match : Actin (HMM E-Value=0) 208 3e-54
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 203 1e-52
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 193 1e-49
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 171 4e-43
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 105 3e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 74 1e-13
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 67 2e-11
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 54 1e-07
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 50 1e-06
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.003
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 32 0.42
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 1.3
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 2.2
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 3.9
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 5.2
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 29 5.2
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 28 9.0
SB_11465| Best HMM Match : EGF (HMM E-Value=0.13) 28 9.0
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 448 bits (1103), Expect = e-126
Identities = 211/222 (95%), Positives = 215/222 (96%)
Frame = +1
Query: 67 LCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
+C VAALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 426
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 427 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 606
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 607 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 444 bits (1095), Expect = e-125
Identities = 210/217 (96%), Positives = 213/217 (98%)
Frame = +1
Query: 82 VAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 261
VAALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 5 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 64
Query: 262 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 441
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 65 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 442 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 621
ETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 125 ETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 184
Query: 622 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
LTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 185 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVAL 221
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 444 bits (1093), Expect = e-125
Identities = 210/217 (96%), Positives = 213/217 (98%)
Frame = +1
Query: 82 VAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 261
VAALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 5 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 64
Query: 262 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 441
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 65 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 442 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 621
ETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 125 ETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 184
Query: 622 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
LTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 185 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 221
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 442 bits (1090), Expect = e-124
Identities = 208/217 (95%), Positives = 213/217 (98%)
Frame = +1
Query: 82 VAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 261
+AALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 6 IAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 262 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 441
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 442 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 621
ETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRD
Sbjct: 126 ETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRD 185
Query: 622 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
LTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 340 bits (835), Expect = 8e-94
Identities = 173/222 (77%), Positives = 180/222 (81%)
Frame = +1
Query: 67 LCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
+ +AALV+ NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 426
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 427 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 606
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DS G + H +
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS------------GDGVSHTV---- 164
Query: 607 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
I ERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 165 -----------PIYEERGYSFTTTAEREIVRDIKEKLCYVAL 195
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 237 bits (581), Expect = 5e-63
Identities = 111/217 (51%), Positives = 152/217 (70%), Gaps = 3/217 (1%)
Frame = +1
Query: 85 AALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 258
+ +V NG+G K G+AG+ P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 259 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 435
+L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 436 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 615
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AG
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAG 186
Query: 616 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYV 726
RD+T YL+K++ RGY+F TA+ E VR +KEKL YV
Sbjct: 187 RDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYV 223
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 208 bits (509), Expect = 3e-54
Identities = 94/138 (68%), Positives = 116/138 (84%)
Frame = +1
Query: 319 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 498
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 499 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 678
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 679 AEREIVRDIKEKLXYVAL 732
AE++I+RD+KE L Y A+
Sbjct: 2249 AEQQIIRDLKETLCYCAM 2266
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/59 (47%), Positives = 37/59 (62%)
Frame = +1
Query: 16 AVSSIPASPTQTHTKFNLCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQ 192
AV+ AS T+ F +V +V+ NGSG CKAG + +PR VFP+IVGRPRH+
Sbjct: 2074 AVAMNIASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 203 bits (496), Expect = 1e-52
Identities = 98/107 (91%), Positives = 103/107 (96%)
Frame = +1
Query: 412 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 591
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 592 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 184
Score = 169 bits (412), Expect = 2e-42
Identities = 78/86 (90%), Positives = 80/86 (93%)
Frame = +1
Query: 82 VAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 261
VAALV+ NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 5 VAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 64
Query: 262 LTLKYPIEHGIITNWDDMEKIWHHTF 339
LTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 65 LTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 193 bits (471), Expect = 1e-49
Identities = 92/100 (92%), Positives = 96/100 (96%)
Frame = +1
Query: 433 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 612
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 613 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVAL 100
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 171 bits (417), Expect = 4e-43
Identities = 74/116 (63%), Positives = 101/116 (87%)
Frame = +1
Query: 367 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 546
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 547 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 714
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 105 bits (253), Expect = 3e-23
Identities = 48/126 (38%), Positives = 80/126 (63%)
Frame = +1
Query: 277 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 456
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 457 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 636
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 637 MKILTE 654
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 74.1 bits (174), Expect = 1e-13
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 478 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 654
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 655 RGYSFTTTAEREIVRDIKEKLXYVA 729
RG++FT+++ +IV DIKEK+ Y++
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLS 851
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Frame = +1
Query: 13 AAVSSIPASPTQTHTKFNLCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQ 192
A + IP + + ++ F L A+V+ NG G+ K GFAG PR + P++VG P+
Sbjct: 678 AFATVIPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRF 736
Query: 193 GVMVG--MGQKD-SYVGDEAQSKRGILTL 270
+++G + KD GD A +K G++ L
Sbjct: 737 SMLIGDNVNVKDYKKYGDAAVAKSGVMHL 765
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 66.9 bits (156), Expect = 2e-11
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 8/93 (8%)
Frame = +1
Query: 472 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 627
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 628 DYLMKILTERGYSFTTTAEREIVRDIKEKLXYV 726
++ ++L ER E + IKE+ Y+
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIKERWGYI 132
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +1
Query: 205 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 384
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.42
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 514 TGIVLDSGDGVSHTVPI 564
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 54.0 bits (124), Expect = 1e-07
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Frame = +1
Query: 82 VAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 261
+A LV+ G+ K GFA APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 262 LTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 435
L Y P + G + NWD ++IW +TF E + M +I
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEI 324
Query: 436 MFETFNSPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 597
+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 325 LFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVR 384
Query: 598 R 600
R
Sbjct: 385 R 385
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = +1
Query: 91 LVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQ 192
LV+ GS M K GFAG AP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 322 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 501
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 502 SGRTTGIV 525
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 32.3 bits (70), Expect = 0.42
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -3
Query: 690 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGV----GDTISGVEH 523
F +SG + D H++ + +TS V+ + G + D + T S E
Sbjct: 134 FGISGTANTEEQIDVDKHQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEA 193
Query: 522 DTGGTTGGVQ 493
+T GTTGG Q
Sbjct: 194 NTAGTTGGTQ 203
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.97
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 268 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 420
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 409 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 525
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 654 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEHDTGG 511
L E + +V Q + GV S G+G G TISG D+GG
Sbjct: 1474 LQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -3
Query: 429 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 250
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 249 AL 244
++
Sbjct: 214 SV 215
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -1
Query: 614 PAKSRRRMAWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNM 435
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 434 IWVIFSLLALGLR 396
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 194 PWWRGRPTMDGKTARGAXAPAKPALHMPEPLXTTSAA 84
P W + G T R PAKP+L++P P T ++
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSPPSKTPSS 566
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.1 bits (62), Expect = 3.9
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -1
Query: 554 VWE--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLALG 402
VWE T P + T+P + + Y S +W+ L N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 401 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMIPCSMGYFRVRIPLLLWAS 237
L A + T C T +L ++ ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 597 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 499
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 412 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 561
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 188 WRGRPTMDGKTARGAXAPAKPALHMPEPLXTTSAA 84
W + G T R PAKPAL++P P T ++
Sbjct: 72 WLQQVKDGGNTNRRTRIPAKPALNLPSPPSKTPSS 106
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 164 GKTARGAXAPAKPALHMPEPLXTTSAA 84
G T R PAKPAL++P P T ++
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKTPSS 106
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 397 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 525
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -1
Query: 155 ARGAXAPAKPALHMPEPLXTTSAATEEXHRLNFVCVCVGDAGIDXTAAR 9
ARG A P+ ++P+ L S + + + C CVG G + +R
Sbjct: 1763 ARGLTGVAPPSAYIPQCLDDGSYESVQCLQATQYCWCVGSNGFEIPGSR 1811
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -1
Query: 563 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLALGLRGAS 387
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 386 VSSTGCSSGATRSSL*KVW 330
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
>SB_11465| Best HMM Match : EGF (HMM E-Value=0.13)
Length = 695
Score = 27.9 bits (59), Expect = 9.0
Identities = 28/116 (24%), Positives = 41/116 (35%)
Frame = +1
Query: 25 SIPASPTQTHTKFNLCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMV 204
S +S T T + S V + + +G + G A A S +G H V+
Sbjct: 453 SSQSSDVGTSTNLTIAVSVVMFHISPDAAGHSRGGLTAAFY--ATVTSHMGASNHTKVVN 510
Query: 205 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 372
G + D KR L + I G+I+ W+ I E R E H
Sbjct: 511 G-----DVLADLMSEKREALNKQLNISIGVISTWNSTRDIRKENIDPESRKKDEVH 561
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,000,296
Number of Sequences: 59808
Number of extensions: 428037
Number of successful extensions: 1483
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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