Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_C22
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 448 e-126
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 447 e-126
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 447 e-126
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 447 e-126
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 447 e-126
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 447 e-126
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 447 e-126
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 446 e-126
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 432 e-121
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 418 e-117
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 370 e-103
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 273 1e-73
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 239 1e-63
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 176 1e-44
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 170 8e-43
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 170 8e-43
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 170 8e-43
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 165 4e-41
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 119 2e-27
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 69 3e-12
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.48
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.64
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.64
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 4.5
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 448 bits (1103), Expect = e-126
Identities = 211/222 (95%), Positives = 215/222 (96%)
Frame = +1
Query: 67 LCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
+C VAALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 426
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 427 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 606
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 607 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 447 bits (1102), Expect = e-126
Identities = 210/222 (94%), Positives = 215/222 (96%)
Frame = +1
Query: 67 LCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
+C VAALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 426
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 427 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 606
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 607 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 447 bits (1102), Expect = e-126
Identities = 210/222 (94%), Positives = 215/222 (96%)
Frame = +1
Query: 67 LCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
+C VAALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 426
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 427 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 606
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 607 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 447 bits (1102), Expect = e-126
Identities = 210/222 (94%), Positives = 215/222 (96%)
Frame = +1
Query: 67 LCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
+C VAALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 426
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 427 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 606
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 607 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 447 bits (1102), Expect = e-126
Identities = 210/222 (94%), Positives = 215/222 (96%)
Frame = +1
Query: 67 LCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
+C VAALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 426
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 427 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 606
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 607 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 447 bits (1102), Expect = e-126
Identities = 210/222 (94%), Positives = 215/222 (96%)
Frame = +1
Query: 67 LCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
+C VAALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 426
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 427 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 606
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 607 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 447 bits (1102), Expect = e-126
Identities = 210/222 (94%), Positives = 215/222 (96%)
Frame = +1
Query: 67 LCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
+C VAALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 426
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 427 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 606
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 607 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 446 bits (1099), Expect = e-126
Identities = 209/222 (94%), Positives = 215/222 (96%)
Frame = +1
Query: 67 LCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
+C VAAL++ NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 426
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 427 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 606
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 607 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 432 bits (1064), Expect = e-121
Identities = 201/216 (93%), Positives = 210/216 (97%)
Frame = +1
Query: 82 VAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 261
+AALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 5 IAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 64
Query: 262 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 441
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMF
Sbjct: 65 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMF 124
Query: 442 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 621
ETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRD
Sbjct: 125 ETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRD 184
Query: 622 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVA 729
LTDY+MKILTERGY+FTTTAEREIVRDIKEKL YVA
Sbjct: 185 LTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVA 220
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 418 bits (1030), Expect = e-117
Identities = 196/204 (96%), Positives = 201/204 (98%)
Frame = +1
Query: 121 KAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 300
+AGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 301 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 480
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 481 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 660
AVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 184
Query: 661 YSFTTTAEREIVRDIKEKLXYVAL 732
YSFTTTAEREIVRDIKEKL YVAL
Sbjct: 185 YSFTTTAEREIVRDIKEKLCYVAL 208
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 370 bits (910), Expect = e-103
Identities = 173/178 (97%), Positives = 177/178 (99%)
Frame = +1
Query: 199 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 378
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 379 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 558
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 559 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 121 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 178
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 273 bits (669), Expect = 1e-73
Identities = 122/215 (56%), Positives = 164/215 (76%), Gaps = 1/215 (0%)
Frame = +1
Query: 91 LVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 270
+V+ NGSG+ KAGFAG P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 271 KYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 447
+YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 448 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 627
FN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVT 190
Query: 628 DYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 732
+YL +L GY F + E EIVR++KE Y+AL
Sbjct: 191 EYLRVLLRREGYEFHRSNEFEIVREMKENACYLAL 225
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 239 bits (586), Expect = 1e-63
Identities = 114/216 (52%), Positives = 154/216 (71%), Gaps = 3/216 (1%)
Frame = +1
Query: 91 LVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 264
+VV NG+G K G+AG P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 265 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 441
+ YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 442 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 621
E + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRD 188
Query: 622 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVA 729
+T YL+K+L +RGY+F +A+ E VR +KEKL Y+A
Sbjct: 189 ITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIA 224
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 176 bits (429), Expect = 1e-44
Identities = 94/234 (40%), Positives = 133/234 (56%), Gaps = 21/234 (8%)
Frame = +1
Query: 88 ALVVXNGSGMCKAGFAGAXAPRAVFPSI------VGRPRHQG------VMVGMGQKDSYV 231
A V+ NG+G K G+AG P+ + PS V Q V G+ D ++
Sbjct: 8 ACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFI 67
Query: 232 GDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 408
GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 68 GDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTP 127
Query: 409 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI 564
NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+
Sbjct: 128 ENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPV 187
Query: 565 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYV 726
+GY + I + +AGRD+T ++ +L +R ++ E+ + IKEK YV
Sbjct: 188 ADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYV 241
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 170 bits (414), Expect = 8e-43
Identities = 78/86 (90%), Positives = 80/86 (93%)
Frame = +1
Query: 67 LCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
+C VAALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKRGILTLKYPIEHGIITNWDDMEKI 324
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 170 bits (414), Expect = 8e-43
Identities = 78/86 (90%), Positives = 80/86 (93%)
Frame = +1
Query: 67 LCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
+C VAALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKRGILTLKYPIEHGIITNWDDMEKI 324
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 170 bits (414), Expect = 8e-43
Identities = 78/86 (90%), Positives = 80/86 (93%)
Frame = +1
Query: 67 LCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
+C VAALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKRGILTLKYPIEHGIITNWDDMEKI 324
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 165 bits (400), Expect = 4e-41
Identities = 75/83 (90%), Positives = 77/83 (92%)
Frame = +1
Query: 67 LCXSSVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
+C VAALVV NGSGMCKAGFAG APRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKRGILTLKYPIEHGIITNWDDM 315
SKRGILTLKYPIEHGI+TNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 119 bits (287), Expect = 2e-27
Identities = 72/209 (34%), Positives = 113/209 (54%), Gaps = 17/209 (8%)
Frame = +1
Query: 82 VAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QSKR 255
V+ LV GS + GFAG P+ PS + Q+ GD + Q+KR
Sbjct: 11 VSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQTKR 70
Query: 256 ------GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 390
G + P ++ G+I +W+ EKI H++ N L P EHPVL +E
Sbjct: 71 EKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSE 130
Query: 391 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE 570
+ N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG + VP+++
Sbjct: 131 SSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFD 190
Query: 571 GYALPHAILRLDLAGRDLTDYLMKILTER 657
GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 191 GYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 68.9 bits (161), Expect = 3e-12
Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 4/221 (1%)
Frame = +1
Query: 79 SVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 258
S+ ++ NG K G + +PR V SIV + +H+ V + + +E K
Sbjct: 2 SLTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFS 56
Query: 259 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 438
+ ++ PIE G + NWD ++IW TF + V + LT+ A + ++I+
Sbjct: 57 LFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEIL 114
Query: 439 FETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLD 606
F+ F ++ + L S + +V+DSG + G + +++R+D
Sbjct: 115 FDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRID 174
Query: 607 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVA 729
+ G+ LT+ L ++ R + E ++ + KE L +V+
Sbjct: 175 VGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVS 213
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 68.9 bits (161), Expect = 3e-12
Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 4/221 (1%)
Frame = +1
Query: 79 SVAALVVXNGSGMCKAGFAGAXAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 258
S+ ++ NG K G + +PR V SIV + +H+ V + + +E K
Sbjct: 2 SLTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFS 56
Query: 259 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 438
+ ++ PIE G + NWD ++IW TF + V + LT+ A + ++I+
Sbjct: 57 LFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEIL 114
Query: 439 FETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLD 606
F+ F ++ + L S + +V+DSG + G + +++R+D
Sbjct: 115 FDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRID 174
Query: 607 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVA 729
+ G+ LT+ L ++ R + E ++ + KE L +V+
Sbjct: 175 VGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVS 213
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 60.1 bits (139), Expect = 2e-09
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 5/217 (2%)
Frame = +1
Query: 91 LVVXNGSGMCKAGFAGAXA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 264
L++ GS +AG P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 265 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 444
+E I D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 445 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 624
+ + Q L LYA TTG+V+D G+ V + VP+ +GY + AI + + +
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQM 357
Query: 625 TDYLMKILTERG---YSFTTTAEREIVRDIKEKLXYV 726
D L L+ Y+F + E+ I+R E+ YV
Sbjct: 358 GDSLRASLSAHNKGLYAFQSPVEKLILRFALEQTTYV 394
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 545 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 450
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.64
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 232 GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 411
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 412 NREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 564
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 690 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 556
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 212 PIPTITPWWRGRPTMDGKTARGAXAPAKPALHMPEPL 102
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,784,417
Number of Sequences: 27780
Number of extensions: 296382
Number of successful extensions: 1350
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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