BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_C20
(749 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 116 8e-28
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 116 8e-28
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 116 1e-27
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 115 1e-27
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 29 0.15
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 24 4.4
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 24 4.4
DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor prot... 24 5.8
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 116 bits (279), Expect = 8e-28
Identities = 54/111 (48%), Positives = 75/111 (67%)
Frame = +3
Query: 129 QFSLCWNNFHANMSAGFHGLLSRGXLVXVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNP 308
Q+ L WNN +N++ LL L VTLA E +++AH+ +LS CSPYF+++F N
Sbjct: 52 QYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACEKGMVKAHQAILSACSPYFEQIFVENK 111
Query: 309 TQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLT 461
HPI++L+DV + +R LL FMYQGEVNV Q L +F+ TAE L+V+GLT
Sbjct: 112 HPHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHNLQNFLKTAESLKVRGLT 162
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 116 bits (279), Expect = 8e-28
Identities = 54/111 (48%), Positives = 75/111 (67%)
Frame = +3
Query: 129 QFSLCWNNFHANMSAGFHGLLSRGXLVXVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNP 308
Q+ L WNN +N++ LL L VTLA E +++AH+ +LS CSPYF+++F N
Sbjct: 52 QYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACEKGMVKAHQAILSACSPYFEQIFVENK 111
Query: 309 TQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLT 461
HPI++L+DV + +R LL FMYQGEVNV Q L +F+ TAE L+V+GLT
Sbjct: 112 HPHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHNLQNFLKTAESLKVRGLT 162
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 116 bits (278), Expect = 1e-27
Identities = 54/111 (48%), Positives = 75/111 (67%)
Frame = +3
Query: 129 QFSLCWNNFHANMSAGFHGLLSRGXLVXVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNP 308
Q+ L WNN +N++ LL L VTLA E +++AH+ +LS CSPYF+++F N
Sbjct: 52 QYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACEKGMVKAHQAILSACSPYFEQIFVENK 111
Query: 309 TQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLT 461
HPI++L+DV + +R LL FMYQGEVNV Q L +F+ TAE L+V+GLT
Sbjct: 112 HLHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHNLQNFLKTAESLKVRGLT 162
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 115 bits (277), Expect = 1e-27
Identities = 54/111 (48%), Positives = 74/111 (66%)
Frame = +3
Query: 129 QFSLCWNNFHANMSAGFHGLLSRGXLVXVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNP 308
Q+ L WNN N++ LL L VTLA E +++AH+ +LS CSPYF+++F N
Sbjct: 4 QYCLRWNNHQPNLTTVLTTLLQDEKLCDVTLACEKGMVKAHQAILSACSPYFEQIFVENK 63
Query: 309 TQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLT 461
HPI++L+DV + +R LL FMYQGEVNV Q L +F+ TAE L+V+GLT
Sbjct: 64 HPHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHNLQNFLKTAESLKVRGLT 114
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 29.1 bits (62), Expect = 0.15
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 274 EHTDRTNLCACNNLPSAANVTXTRXPRD 191
+ DR L A N LPS +N+T T P D
Sbjct: 16 DSVDRLELAANNVLPSTSNITNTTAPLD 43
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 24.2 bits (50), Expect = 4.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 127 HNFHYAGTISTQICQQAF 180
H Y GT+S +C++A+
Sbjct: 46 HGLKYIGTVSLTLCERAY 63
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 24.2 bits (50), Expect = 4.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 127 HNFHYAGTISTQICQQAF 180
H Y GT+S +C++A+
Sbjct: 46 HGLKYIGTVSLTLCERAY 63
>DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor
protein.
Length = 344
Score = 23.8 bits (49), Expect = 5.8
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 96 RRVVAIM-ASXAQFSLCWNNFHANMSAGFHGL 188
RRV+ ++ A F +CW FHA +G+
Sbjct: 264 RRVLKMLVAVVVAFFICWAPFHAQRLVYIYGV 295
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,470
Number of Sequences: 2352
Number of extensions: 11835
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -