Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_C18
         (582 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          68   3e-13
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          68   3e-13
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          68   3e-13
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           67   3e-13
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    26   0.77 
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   1.8  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   9.5  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    23   9.5  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   9.5  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 67.7 bits (158), Expect = 3e-13
 Identities = 46/155 (29%), Positives = 73/155 (47%)
 Frame = +1

Query: 118 DEIGALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSKA 297
           +E+ ALV D G    + G+A +D P+A  P++VG       P  +  +    + Q  S  
Sbjct: 4   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR------PRHQGVMV--GMGQKDSYV 55

Query: 298 GSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSEHHPVLF 477
           G E +    +  L  P         ++ G V NWD  EK+  + +   +R   E HPVL 
Sbjct: 56  GDEAQSKRGILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106

Query: 478 TEAVWATRPVREKLXELIFEKYQAPAFFLVKNAXL 582
           TEA    +  REK+ +++FE +  PA ++   A L
Sbjct: 107 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 141


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 67.7 bits (158), Expect = 3e-13
 Identities = 46/155 (29%), Positives = 73/155 (47%)
 Frame = +1

Query: 118 DEIGALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSKA 297
           +E+ ALV D G    + G+A +D P+A  P++VG       P  +  +    + Q  S  
Sbjct: 4   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR------PRHQGVMV--GMGQKDSYV 55

Query: 298 GSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSEHHPVLF 477
           G E +    +  L  P         ++ G V NWD  EK+  + +   +R   E HPVL 
Sbjct: 56  GDEAQSKRGILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106

Query: 478 TEAVWATRPVREKLXELIFEKYQAPAFFLVKNAXL 582
           TEA    +  REK+ +++FE +  PA ++   A L
Sbjct: 107 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 141


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 67.7 bits (158), Expect = 3e-13
 Identities = 46/155 (29%), Positives = 73/155 (47%)
 Frame = +1

Query: 118 DEIGALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSKA 297
           +E+ ALV D G    + G+A +D P+A  P++VG       P  +  +    + Q  S  
Sbjct: 4   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR------PRHQGVMV--GMGQKDSYV 55

Query: 298 GSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSEHHPVLF 477
           G E +    +  L  P         ++ G V NWD  EK+  + +   +R   E HPVL 
Sbjct: 56  GDEAQSKRGILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106

Query: 478 TEAVWATRPVREKLXELIFEKYQAPAFFLVKNAXL 582
           TEA    +  REK+ +++FE +  PA ++   A L
Sbjct: 107 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 141


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 67.3 bits (157), Expect = 3e-13
 Identities = 47/155 (30%), Positives = 76/155 (49%)
 Frame = +1

Query: 118 DEIGALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSKA 297
           D+ GALV D G    + G+A +D P+A  P++VG       P  +     G +   G+K 
Sbjct: 4   DDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR------PRHQ-----GVMVGMGNKD 52

Query: 298 GSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSEHHPVLF 477
                 Y+   E    R  + ++  ++ G + NWD  EK+  + +   +R   E HPVL 
Sbjct: 53  A-----YVG-DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 106

Query: 478 TEAVWATRPVREKLXELIFEKYQAPAFFLVKNAXL 582
           TEA    +  REK+ +++FE + APA ++   A L
Sbjct: 107 TEAPLNPKSNREKMTQIMFETFAAPAVYVAIQAVL 141


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 225 PDAHNRWYISFWGI 184
           PD H  WYI FWG+
Sbjct: 147 PDVHY-WYIEFWGL 159


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +2

Query: 158 RCELVMRKRIPQKLIYQRLWASGQLHTSQIPKKRFL-MAISLK 283
           R ++  RK  P  +IY R+W    LH +++   +F   A  LK
Sbjct: 80  RLQVAGRKGFPH-VIYARIWRWPDLHKNELKHVKFCQFAFDLK 121


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 128 PISS-PPYSMPFGPLIIYSFIMLL*KCYFHLIKNN 27
           PI S  P++   GP  I+SFI  +    F ++++N
Sbjct: 178 PIKSWYPWNAMSGPAYIFSFIYQIYFLLFSMVQSN 212


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 128 PISS-PPYSMPFGPLIIYSFIMLL*KCYFHLIKNN 27
           PI S  P++   GP  I+SFI  +    F ++++N
Sbjct: 31  PIKSWYPWNAMSGPAYIFSFIYQIYFLLFSMVQSN 65


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 128 PISS-PPYSMPFGPLIIYSFIMLL*KCYFHLIKNN 27
           PI S  P++   GP  I+SFI  +    F ++++N
Sbjct: 178 PIKSWYPWNAMSGPAYIFSFIYQIYFLLFSMVQSN 212


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.137    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,760
Number of Sequences: 2352
Number of extensions: 14137
Number of successful extensions: 32
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)