Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_C16
         (772 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51199| Best HMM Match : No HMM Matches (HMM E-Value=.)              73   2e-13
SB_14795| Best HMM Match : No HMM Matches (HMM E-Value=.)              52   7e-07
SB_44242| Best HMM Match : SATase_N (HMM E-Value=0.27)                 29   3.1  
SB_42841| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_32181| Best HMM Match : CUB (HMM E-Value=0)                         29   5.5  
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)                  28   9.6  

>SB_51199| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 202

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 30/56 (53%), Positives = 42/56 (75%)
 Frame = +2

Query: 485 PVRVMKLLGVKILIATNAAGGLNPNYKIGDLMIVRDHINMMGFAGNNPLHGPNDER 652
           P+RVM  LG+K L+ TNAAGGL  ++ +GD+M+++DHIN+ G  G +PL G ND R
Sbjct: 147 PLRVMVHLGIKHLVVTNAAGGLRQDWNVGDIMVIKDHINLAGLTGLSPLRGCNDSR 202


>SB_14795| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 62

 Score = 51.6 bits (118), Expect = 7e-07
 Identities = 22/56 (39%), Positives = 34/56 (60%)
 Frame = +2

Query: 203 YSYETLVEXANFLLSRISEKPNIGIICGSGMGSLAESIADGVRIPYEDIPNFPIST 370
           + Y+ +      + ++ S +P IG+ICGSG+ SL + + +   IPYE IP FP ST
Sbjct: 6   HKYDEVDAICQNIRNQTSYQPTIGVICGSGLSSLGDLVTEKTVIPYEKIPQFPRST 61


>SB_44242| Best HMM Match : SATase_N (HMM E-Value=0.27)
          Length = 426

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -1

Query: 730 FLRNLFSNFXKFIIIGFVHRGEXRSKPLVIGSMQRIVASKTHHVD-VISYNHQITNFV 560
           FLR LFS   K I+ G  +     SK +V  SM  +  S  HH D ++ ++  +  +V
Sbjct: 120 FLRPLFSERAKTILRGLFNATVSSSKNMVTKSMDDL--SDYHHTDPMVRWDRDLAGYV 175


>SB_42841| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1651

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 350  PNFPISTVEGHHGQLVFGHIEGVSVVAMQGRFHYYEGYPLW 472
            PN  IS VE  +G++VF +  G  +V ++  F+YY    +W
Sbjct: 1321 PNEFIS-VELVNGKIVFKYDTGAGLVRVESNFNYYSAGGVW 1360


>SB_32181| Best HMM Match : CUB (HMM E-Value=0)
          Length = 588

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 269 IGIICGSGMGSLAESIADGVRIPYEDIPNFPISTVEGHHGQLVF 400
           IG  CG   G L  S  D VR+ YE       + ++ H+  L+F
Sbjct: 116 IGRYCGYQKGELIYSKTDEVRLEYESTSGLANAGLQIHYTSLLF 159


>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
          Length = 1080

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 407 CDRKQADHDDPPLCLWESLEY 345
           C+R   +HDD P C+ +S E+
Sbjct: 394 CERDSTEHDDSPRCVRDSKEH 414


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,498,253
Number of Sequences: 59808
Number of extensions: 457968
Number of successful extensions: 949
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)