Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_C15
         (570 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    57   1e-08
AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    55   3e-08
AF106584-6|AAC78220.1|  424|Caenorhabditis elegans Hypothetical ...    31   0.77 
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    29   2.4  
U53153-9|AAC69041.1|  511|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AL032644-4|CAA21665.1|  490|Caenorhabditis elegans Hypothetical ...    27   9.5  

>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 27/69 (39%), Positives = 39/69 (56%)
 Frame = +3

Query: 96  MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 275
           M+Y         GG  +P+A DV K L + G++ D E    V+  L GK + ++IA G+ 
Sbjct: 1   MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60

Query: 276 KLSSMPVGG 302
           KLSS+P GG
Sbjct: 61  KLSSVPSGG 69


>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 37/112 (33%), Positives = 45/112 (40%)
 Frame = +3

Query: 96  MRYXXXXXXXXXGGKXTPAAADVEKXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 275
           MRY         GG   P   D++  LS+VG++AD E  K V++ L GK VE+LIA G  
Sbjct: 1   MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60

Query: 276 KLSSMPVGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 431
            L S  V GG                                   MGFGLFD
Sbjct: 61  GLVS--VSGGAAPAAAAAPAAGGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110


>AF106584-6|AAC78220.1|  424|Caenorhabditis elegans Hypothetical
           protein F54A5.1 protein.
          Length = 424

 Score = 30.7 bits (66), Expect = 0.77
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -3

Query: 304 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRXFSTSAAAGVXLP 134
           P P       SRP+AI  +TS   S +    +  PS S P+ L  F+ +   GV LP
Sbjct: 340 PSPAVSTFEVSRPSAIISATSSTTSPISIPATIIPSVS-PSALELFAMAQQLGVQLP 395


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 144 TPAAADVEKXLSSVGIEADGEKLKKVITEL-NGKDVEQLI 260
           TPA+A   +   + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 445 TPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 144 TPAAADVEKXLSSVGIEADGEKLKKVITEL-NGKDVEQLI 260
           TPA+A   +   + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 445 TPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>U53153-9|AAC69041.1|  511|Caenorhabditis elegans Hypothetical
           protein T19A5.5 protein.
          Length = 511

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 67  HVSCQLGLKKCVTWPRXYWLC 129
           H  CQ G  +CV  PR  W C
Sbjct: 55  HFKCQTGQNQCVPDPRGRWNC 75


>AL032644-4|CAA21665.1|  490|Caenorhabditis elegans Hypothetical
           protein Y51H1A.4 protein.
          Length = 490

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 165 EKXLSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 305
           EK      +EAD   + ++I +   + VE L+ A +E+     VGGG
Sbjct: 101 EKTTFQCEMEADNSGVTEMIEKRYTQHVESLLTARKERKRRHRVGGG 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,651,880
Number of Sequences: 27780
Number of extensions: 125493
Number of successful extensions: 397
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)