Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_C14
(491 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F6.05 |||oligosaccharyltransferase epsilon subunit |Schizos... 72 5e-14
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 26 2.7
SPCC132.04c |||NAD-dependent glutamate dehydrogenase |Schizosacc... 26 3.5
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 26 3.5
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 25 4.7
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 25 4.7
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 4.7
SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subun... 25 4.7
SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr 2|||M... 25 8.2
>SPAC6F6.05 |||oligosaccharyltransferase epsilon subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 122
Score = 71.7 bits (168), Expect = 5e-14
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 7/89 (7%)
Frame = +3
Query: 96 LKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSCFVLGVCLRLQVNPE--- 266
LK IDA+L ++ + +QFGY LVGT+PFNSFLSGFIS V FV+ V R+ + +
Sbjct: 26 LKTIDAFLGFLVVVGGLQFGYALLVGTYPFNSFLSGFISCVGQFVITVGFRMALTQQELQ 85
Query: 267 ---NKNEFQGLSA-ERGFADFIFAHLVLH 341
+K + +S +R F +F F+ LVLH
Sbjct: 86 SSSSKKKSPVVSPYKRAFLEFCFSSLVLH 114
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.2 bits (55), Expect = 2.7
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +3
Query: 54 PKLYQASTTXTPKXLKIIDAYLFYIFLTAVIQFGYCCLVG 173
PK+ + T L +D YL+YI ++ + Y +G
Sbjct: 557 PKILLSLLYLTDLSLFFLDTYLWYILISTIYSLAYAFCLG 596
>SPCC132.04c |||NAD-dependent glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1106
Score = 25.8 bits (54), Expect = 3.5
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 39 LTAVIPKLYQASTTXTPKXLKIIDAYLFYIFLTAVI-QFGYCCLVGTFPFNSFLSGFIST 215
L A IPK QA +I ++YL IF T + +F Y +V + PF F +IST
Sbjct: 1041 LRASIPKTLQAKIGLEKMLERIPESYLRAIFSTYLASRFVYQHVVSSDPFAFF--DYIST 1098
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 25.8 bits (54), Expect = 3.5
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
Frame = -2
Query: 268 FSGLTCSRRHTPRTKQLTVDIKP-------LKKELNGKVPTRQ---Q*PNCMTAVRKI*K 119
F G+T RRH K DI P L KE+N Q + P+ ++R +
Sbjct: 36 FEGVTLQRRHVKGMKSYGSDITPRRPKQLGLPKEVNTSECIDQGSWRKPSAFESLRSYSR 95
Query: 118 RYASIILSXLGV 83
+++ I S +GV
Sbjct: 96 KFSKRIFSFIGV 107
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 25.4 bits (53), Expect = 4.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 176 FPI*FFLKWFYIYSKLL 226
FP FFL WFY++ +L
Sbjct: 293 FPFLFFLFWFYMHFNIL 309
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 25.4 bits (53), Expect = 4.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 240 CLRLQVNPENKNEFQGLSAERGFADF 317
C++ QV+P+ NEF +A++ F
Sbjct: 356 CVKFQVDPDKPNEFLAGTADKRILQF 381
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.4 bits (53), Expect = 4.7
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +3
Query: 33 SSLTAVIPKLYQASTTXTPKXLKIIDAYLFYIFLTAVIQFGYCCLVGT 176
+SL + PK + T L +D YL+Y+ ++ + Y +G+
Sbjct: 641 ASLCSHQPKFLLSLVYLTDLVLFFLDTYLWYMLISTMFSIAYSFYMGS 688
>SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subunit
Alg2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 511
Score = 25.4 bits (53), Expect = 4.7
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +3
Query: 117 LFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSC----FVLGVCL 245
L +F+ ++ +G C + T PF F T S F+LG C+
Sbjct: 448 LLAVFVLFMLFWGTCIIAATVPFAIIKLYFAQTYSSVKLGFMLGTCI 494
>SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 685
Score = 24.6 bits (51), Expect = 8.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 12 KINQITMSSLTAVIPKLYQASTTXTPKXL 98
K+++I + +L V+P+L S TP L
Sbjct: 364 KLSEIVLDALCPVLPELVGGSADLTPSNL 392
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,656,598
Number of Sequences: 5004
Number of extensions: 32302
Number of successful extensions: 97
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 192109570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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