Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_C09
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    30   0.020
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   7.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   7.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   7.1  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   7.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   7.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   7.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   7.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.4  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.4  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 30.3 bits (65), Expect = 0.020
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +3

Query: 537 IVGNFIITLILDNIGRKKSHI-LTIFPNLAGWFLFLL--VNNFPGLMAARFLQGIAMGML 707
           IVG F    I D I +K  +I + ++ N A     LL  +N+FP   AARF       +L
Sbjct: 442 IVGTFNSVFICDLIEQKVKNIQMLVYQNEAEEVKILLDVINHFPHFTAARFFDLNRKTIL 501

Query: 708 GPLGSI 725
           G L ++
Sbjct: 502 GVLNAL 507


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 673 AAMRPGKLLTSRNRNQPARFGKMV 602
           A MR  K +T+    QP RFGK++
Sbjct: 336 AQMRLNKHVTTTYPKQPLRFGKIL 359


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 371  KQRCVFAFFYFNSL 330
            + + VFAFF FN+L
Sbjct: 1265 RNKSVFAFFMFNAL 1278


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 371  KQRCVFAFFYFNSL 330
            + + VFAFF FN+L
Sbjct: 1265 RNKSVFAFFMFNAL 1278


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 465 KSDSHIHLTRSEESWIASVVGFALIVGNF 551
           K D +     S + W+A + G  LIV  F
Sbjct: 253 KEDPNYWSQGSYDDWLAEMAGARLIVERF 281


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 465 KSDSHIHLTRSEESWIASVVGFALIVGNF 551
           K D +     S + W+A + G  LIV  F
Sbjct: 260 KEDPNYWSQGSYDDWLAEMAGARLIVERF 288


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 422 LRHRLPGYIDSESPEIRFPHPSY 490
           LR    G+ DS SP  + PH  +
Sbjct: 216 LRGNWAGFADSHSPLYKRPHDQW 238


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +1

Query: 31  RNVWTRSEKKKYIFFLHLKKKI 96
           R VWT   K K I  L  KKKI
Sbjct: 96  RLVWTLPGKTKMIAHLKDKKKI 117


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +1

Query: 31  RNVWTRSEKKKYIFFLHLKKKI 96
           R VWT   K K I  L  KKKI
Sbjct: 410 RLVWTLPGKTKMIAHLKDKKKI 431


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +1

Query: 31  RNVWTRSEKKKYIFFLHLKKKI 96
           R VWT   K K I  L  KKKI
Sbjct: 643 RLVWTLPGKTKMIAHLKDKKKI 664


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +1

Query: 31  RNVWTRSEKKKYIFFLHLKKKI 96
           R VWT   K K I  L  KKKI
Sbjct: 643 RLVWTLPGKTKMIAHLKDKKKI 664


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 813 DWKVPQGSVTKKH 775
           DW+ P+GS  KK+
Sbjct: 209 DWEYPKGSEDKKN 221


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +3

Query: 465 KSDSHIHLTRSEESWIASVVGFALIVGNFIITLILDNIGRKK 590
           K+D +I    SE+ W   V+  A ++   I T+ ++    K+
Sbjct: 365 KTDINITTVPSEQQWGILVLIIAPLIATLIATVTVNYYRHKQ 406


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 530 RPHRGKLHNYINSGQHRQEEVSHPH 604
           R  RG+ +NY N  Q      +HP+
Sbjct: 343 RMSRGRQYNYPNPQQQYYYNKNHPN 367


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 530 RPHRGKLHNYINSGQHRQEEVSHPH 604
           R  RG+ +NY N  Q      +HP+
Sbjct: 291 RMSRGRQYNYPNPQQQYYYNKNHPN 315


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,084
Number of Sequences: 336
Number of extensions: 4650
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)