Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_C09
         (852 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   6.2  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   8.2  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   8.2  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/37 (21%), Positives = 20/37 (54%)
 Frame = +3

Query: 540 VGNFIITLILDNIGRKKSHILTIFPNLAGWFLFLLVN 650
           +GN ++ ++ D +G+K +H   +   L  +    ++N
Sbjct: 227 IGNSLMVILPDLVGKKITHFFDLVRPLIAFKFHSILN 263


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 515 ICRRFRPHRGKLHNYI 562
           +C R   H GKLH ++
Sbjct: 152 VCERAFEHSGKLHRHM 167


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 356 FAFFYFNSLTHF 321
           F F YFNSL  F
Sbjct: 22  FIFLYFNSLVRF 33


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,944
Number of Sequences: 438
Number of extensions: 5719
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)