Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_C02
(744 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 57 2e-08
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_14281| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 30 1.7
SB_28622| Best HMM Match : CcmD (HMM E-Value=0.55) 30 2.3
SB_2403| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_55470| Best HMM Match : Nucleoplasmin (HMM E-Value=4.8) 29 3.0
SB_13376| Best HMM Match : DUF1213 (HMM E-Value=0.18) 29 3.0
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 29 3.0
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099) 29 4.0
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_26361| Best HMM Match : fn3 (HMM E-Value=0) 29 4.0
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 29 4.0
SB_33092| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_17736| Best HMM Match : Aconitase (HMM E-Value=5.2e-16) 29 4.0
SB_41827| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_48080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_36059| Best HMM Match : TolA (HMM E-Value=0.1) 29 5.3
SB_17018| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_235| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=3.9e-15) 28 7.0
SB_26593| Best HMM Match : PID (HMM E-Value=0.53) 28 9.2
SB_58795| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_41280| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_40869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_26127| Best HMM Match : Pkinase (HMM E-Value=5.3e-10) 28 9.2
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/68 (42%), Positives = 38/68 (55%)
Frame = +2
Query: 536 PLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXCITSFEDVNLTELMRTNISLA 715
P P ++ +E+ T GINF KY+ I V SG+ I SFE+ NL E N+ A
Sbjct: 671 PTPTEDEEEMFR-STIQQGINFEKYDQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKA 729
Query: 716 RYDKPTPV 739
+Y KPTPV
Sbjct: 730 QYKKPTPV 737
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/68 (42%), Positives = 38/68 (55%)
Frame = +2
Query: 536 PLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXCITSFEDVNLTELMRTNISLA 715
P P ++ +E+ T GINF KY+ I V SG+ I SFE+ NL E N+ A
Sbjct: 94 PTPTEDEEEMFR-STIQQGINFEKYDQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKA 152
Query: 716 RYDKPTPV 739
+Y KPTPV
Sbjct: 153 QYKKPTPV 160
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/69 (40%), Positives = 39/69 (56%)
Frame = +2
Query: 533 VPLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXCITSFEDVNLTELMRTNISL 712
+P + +LL +TGI F YE+IP + SG+ P ITSF ++ E + NIS
Sbjct: 437 IPPELPDNIDLLFQDAPHTGIKFDNYENIPSKVSGENQPPKITSFNELPFGEQLMANISR 496
Query: 713 ARYDKPTPV 739
A Y +PTPV
Sbjct: 497 AGYRRPTPV 505
>SB_14281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 34
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2
Query: 569 LFGTGNTGINFSKYEDIPVEASGDRVP 649
LF + NTGINF KY+DIPVEA+G P
Sbjct: 3 LFASHNTGINFEKYDDIPVEATGQECP 29
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 37.5 bits (83), Expect = 0.011
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
Frame = +2
Query: 131 SNMSNVTNQNGTGLEQQLAGLDLQ------PQAPKSTG-----RYIPPHLRRQLQATS-D 274
S MS+V + N L+Q+ AGLDL P A ++ RYIPPHLR + Q+ +
Sbjct: 710 SVMSHVAHGNNQSLDQRFAGLDLNSGVGQSPDAGRNPNQPTQQRYIPPHLRGKQQSQNFV 769
Query: 275 QGRDSGSQNGEP-PERWNESEK 337
R+ G G P + W +
Sbjct: 770 DPRNFGGYGGPPRDQNWGRDPR 791
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 656 ITSFEDVNLTELMRTNISLARYDKPTPV 739
I FEDV+L E++ N+ LA Y KPTPV
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPV 901
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/127 (22%), Positives = 42/127 (33%)
Frame = +2
Query: 182 LAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGRDSGSQNGEPPERWNESEKWNXXXXXX 361
L G D+ P G +PP R + +G D Q EP + + +
Sbjct: 951 LVGGDMLPHGGPDHGPGVPPDERPEAGGVDMKGEDFLRQQSEPKQNEPKDRQNELRDLQD 1010
Query: 362 XXXXXXXXXXXXXYEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPL 541
E P + E PR E S R R R R+D + T +
Sbjct: 1011 EPRDRQNEPRDRVKEEVRPNPE---EKPPRDHEYSRERDREHSRDRDRDRRDRDRHTSDI 1067
Query: 542 PRDERQE 562
RDE ++
Sbjct: 1068 MRDEPRD 1074
>SB_28622| Best HMM Match : CcmD (HMM E-Value=0.55)
Length = 1087
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 452 AEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQEL 565
AEERS+ SD V DEN++ +P+P++ + +
Sbjct: 352 AEERSDQPRASDGVFNFAITHDENNYALPIPQERHKRM 389
>SB_2403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 452 AEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQEL 565
AEERS+ SD V DEN++ +P+P++ + +
Sbjct: 3 AEERSDQPRASDGVFNFAITHDENNYALPIPQERHKRM 40
>SB_55470| Best HMM Match : Nucleoplasmin (HMM E-Value=4.8)
Length = 230
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 206 QAPKSTGRYIPPHLRRQLQATSDQGRDSGSQNGE 307
+APKSTGR P H + Q D + G N +
Sbjct: 165 KAPKSTGRQKPEHYKYQPNDDDDDNDNGGGDNDD 198
>SB_13376| Best HMM Match : DUF1213 (HMM E-Value=0.18)
Length = 1022
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 206 QAPKSTGRYIPPHLRRQLQATSDQGRDSGSQNGE 307
+APKSTGR P H + Q D + G N +
Sbjct: 957 KAPKSTGRQKPEHYKYQPNDDDDDNDNGGGDNDD 990
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 424 IPWCRWFIILLTSHVARPASVPFAF--TIIPFL-GFIPTLWWFAIL 296
+PW +++ L HV ++PF+ T +P+L IP L W +L
Sbjct: 30 LPWIGIWLLWLFGHVYLAVALPFSVLPTTVPYLFDRIPALVWIGLL 75
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 29.5 bits (63), Expect = 3.0
Identities = 35/158 (22%), Positives = 56/158 (35%), Gaps = 4/158 (2%)
Frame = +2
Query: 101 QSSQKNVPLGSNMSNVTNQNGTGLEQQLAGL-DLQPQAPKSTGRYIPPHLRRQ-LQATSD 274
+ S+ +VP G+ + + L +GL D Q Q R + Q D
Sbjct: 1573 EQSRNDVPSGNFDKRESQYTRSLLRNTFSGLHDSQTQQGDHQRRLSAEKQNQPPYQRPGD 1632
Query: 275 QGRDSGSQNGEPPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRNDRWKEPEPRA 454
+ RDSG Q R N ++ E +N R E R+
Sbjct: 1633 RSRDSGEQRSSSDNR-NSNDDVKAGKSQTRENPQERGNKESTVESKDVKNLRENEAR-RS 1690
Query: 455 EERSNSRWPSDDVRRT--RSRKDENDWTVPLPRDERQE 562
+ R + D R+ ++ ND P P+D++QE
Sbjct: 1691 SSPKDKRSSTPDSRKPTGENKSHRNDRRPPTPQDKKQE 1728
>SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099)
Length = 2489
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 419 RNDRWKEPEPRAEERSNSRWPSDDVRRTRSR-KDENDWTVPLPRDERQELLLFGTGNTGI 595
R +E E + +++ PS +R+T S K N+W+ +P + L TG+
Sbjct: 750 REQEEEEEEDVYVDGTDTILPSGQMRKTESAVKGNNEWSGAMPPTCSKRLQSLLTGHQDN 809
Query: 596 NFSKYEDIPVEASGD 640
FS ED E+S D
Sbjct: 810 RFSNEED-TFESSED 823
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +2
Query: 95 LEQSSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSD 274
+E+SS+ + S + T +N +G LD+QP+ PK T I LR D
Sbjct: 551 IEESSRDD----SGLYRCTARNKSGTADMTFQLDVQPKKPKGTAPEIVSELRPVEATEGD 606
Query: 275 QGRDSGSQNGEP 310
S + +G+P
Sbjct: 607 DAVLSCTISGKP 618
>SB_26361| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1898
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 197 LQPQAPKSTGRYIPPHLRRQLQAT-SDQGRDSGSQNGEPP 313
+QP + R PPHL +L A+ +++ R S +G PP
Sbjct: 1790 VQPNQEPNKRRKKPPHLETRLSASRANRDRGHSSSSGSPP 1829
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 623 VEASGDRVPXCITSFEDVNLTELMRTNISLARYDKPTPV 739
+ G+ P I SF D+NL + T ++ + PTP+
Sbjct: 60 IHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPI 98
>SB_33092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 443 EPRAEERSNSR--WPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGT 580
E R++ R S WP D +R+D + WT L + +L FGT
Sbjct: 26 ECRSQNRPVSEVFWPKGDEPNQPNREDPDKWTTILASGYKMPMLGFGT 73
>SB_17736| Best HMM Match : Aconitase (HMM E-Value=5.2e-16)
Length = 391
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 513 KTRMIGQYRYLAMNDRNYCCSALATPG 593
K R+IG Y+ ++R CC +TPG
Sbjct: 354 KWRVIGDENYVECSNRGACCLGASTPG 380
>SB_41827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = -3
Query: 436 FPAVIPWCRWF-IILLTSHVARPASVPFAFTIIPFLGFIPTLWWFAILRSTVSTLIRGCL 260
+P+ IP+ W I+L H+ + T I GF+ ++W I+ + + C
Sbjct: 599 YPSGIPFTFWEQYIMLRQHLMVAIIIVLGITFIVIAGFLWSVWTAIIIVHS----LHPCT 654
Query: 259 QLPTQMRGYVATSTLRSLGLQVQTSKLLL*TCSI 158
+ PT+ V S++ ++ L Q L++ T +
Sbjct: 655 RSPTRSARMVDLSSVSNVCLFHQDLTLVMITVQL 688
>SB_48080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 373 PASVPFAFTIIPFLGFIPTLWWFAILRST 287
P S PF + PFL P +W AI +ST
Sbjct: 76 PVSFPFHPKLSPFLPLTPCMWDHAIKKST 104
>SB_36059| Best HMM Match : TolA (HMM E-Value=0.1)
Length = 1936
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +2
Query: 404 EPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDEND 526
+P AP+ ++ KEPEP A++ + + R+++ +D++D
Sbjct: 1537 DPNAPQGEKPKEPEPEADKPAEK--SQEHSRKSQRGRDKDD 1575
>SB_17018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 198 KSRPASCCSRPVPFWLVTLLILLPSGTFFWELCSKNI*NTVYNE 67
KS P +C S P+ L+ LL +LP W+L S + T N+
Sbjct: 255 KSTPRNCGSCPIKE-LLPLLKVLPFNVLLWQLFSPSAPQTTVNK 297
>SB_235| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=3.9e-15)
Length = 544
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -3
Query: 448 WLRLFPAVIPWCRW-FIILLTSHVARPASVPFAFTIIPFLGFIPTLWW 308
W +F +PW + F+I S+ P + AF +I F GF TL W
Sbjct: 252 WAGVFGWQLPWLLYAFVIPCRSNA--PKVMNIAFMLIVFFGFGFTLGW 297
>SB_26593| Best HMM Match : PID (HMM E-Value=0.53)
Length = 175
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +3
Query: 366 DAGLATCDVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYL 545
D+GL + + M RH MT + K V +G++ +L + R Y
Sbjct: 23 DSGLGSFEESEPMEARHRSMTTATEEIEAAKLVESQSGIIN-GGDLPIKAQRFHFVYLGF 81
Query: 546 AMNDRNY 566
A+ DR Y
Sbjct: 82 AVVDRRY 88
>SB_58795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 27.9 bits (59), Expect = 9.2
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = -3
Query: 286 VSTLIRGCLQLPTQMRGYVATSTLRSLGLQVQTSKLLL*TCSIL-VGNI-THITTKR--Y 119
+ LI G +LP + + TL+SLG T K IL + NI H+TTK
Sbjct: 14 IDVLITGRAKLPHDILRNASPDTLKSLGTS-GTYKWRRIAKQILHIANIGRHLTTKMADT 72
Query: 118 VFLGTLLQKYLKHSLQ*ILHKHKFTKPQERL 26
F L+ +K S++ +L K+ K + RL
Sbjct: 73 SFDQQALEPSIKESMRNVLGKYYQPKTRHRL 103
>SB_41280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +2
Query: 416 PRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPR 547
PR R K+P R + R+ T SR E WT LPR
Sbjct: 315 PRRSRLKKPISR-NSLATDRFSYTSFLTTASRISEESWTPDLPR 357
>SB_40869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/65 (24%), Positives = 26/65 (40%)
Frame = -2
Query: 350 HDHSISRIHSNALVVRHSEIHCLDLDQRLPATAYADAGVCSDQYS*EPGAASPDQQAAAL 171
H H+ HS+ + HS CL + A + +C+ Y G A D Q + +
Sbjct: 327 HGHTKGLAHSHTKGLAHSHTKCLAHSRPREKAVQALSAMCNQYYRDSTGKAITDIQGSPV 386
Query: 170 DLFHF 156
+ F
Sbjct: 387 NCSAF 391
>SB_26127| Best HMM Match : Pkinase (HMM E-Value=5.3e-10)
Length = 460
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 141 VMLPTKMEQV*SSSLLVWTCSPRLLRVLVATYPRICVGSCR 263
VM+ + +V +LV+TCS L V AT P + G CR
Sbjct: 343 VMMAEVISEV-MKKILVFTCSGDLGHVTSATSPEVEEGDCR 382
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,134,551
Number of Sequences: 59808
Number of extensions: 498428
Number of successful extensions: 1583
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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