Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_C02
(744 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 64 6e-12
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 30 0.087
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 30 0.087
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 27 0.81
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 25 2.5
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 25 2.5
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 25 3.3
AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. 23 7.5
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 23 7.5
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 63.7 bits (148), Expect = 6e-12
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +2
Query: 479 PSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTG-NTGINFSKYEDIPVEASGDRVPXC 655
PS D + ++ K + PLP ++ E L+FG+G ++GINF K+E+I V SG+ P
Sbjct: 117 PSMD--QVKTDKPRELYIPPLPTED--ESLIFGSGISSGINFDKFEEIQVRVSGENPPDH 172
Query: 656 ITSFEDVNLTELMRTNISLARYDKPTPV 739
+ SFE L E + TN+ + Y KPTP+
Sbjct: 173 VESFERSGLREEVMTNVRKSSYTKPTPI 200
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 29.9 bits (64), Expect = 0.087
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 200 QPQAPKS-TGRYIPPHLRRQLQATSDQ 277
QPQ + TGRY PP +R+QLQ Q
Sbjct: 328 QPQQQQQQTGRYQPPQMRQQLQQQQQQ 354
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 29.9 bits (64), Expect = 0.087
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +2
Query: 101 QSSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQG 280
Q Q+ P + V + ++QL Q Q + RY+PP LR+Q Q Q
Sbjct: 408 QQQQQQQPQQLLWTTVVRSCPSQRQRQLQQQQQQQQQQQQGERYVPPQLRQQRQQQQPQQ 467
Query: 281 RDSGSQNGEPPER 319
+ + P++
Sbjct: 468 QQQQRPQQQRPQQ 480
Score = 26.2 bits (55), Expect = 1.1
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 200 QPQAPKSTGRYIPPHLRRQLQATSDQGRDSGSQNGEPPERWNESEKW 340
Q Q + RY+PP LR+Q Q Q R Q + ++ + E++
Sbjct: 254 QQQQQQQGERYVPPQLRQQRQ---QQQRPRQQQQQQQQQQQQQGERY 297
Score = 26.2 bits (55), Expect = 1.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 200 QPQAPKSTGRYIPPHLRRQLQATSDQGRDSGSQ 298
Q Q + RY+PP LR+Q Q Q + Q
Sbjct: 287 QQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQ 319
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 26.6 bits (56), Expect = 0.81
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +2
Query: 407 PPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPRDER 556
PP P R P PR E R ++ R R+D VP R R
Sbjct: 1107 PPIPPRSRRLPPSPRTTEMRRRRRNYMQLQYRRRRRDGELGDVPQGRQRR 1156
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 25.0 bits (52), Expect = 2.5
Identities = 19/78 (24%), Positives = 30/78 (38%)
Frame = +2
Query: 104 SSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGR 283
++Q+ +PL S + Q +QQ Q Q + + + Q +T Q R
Sbjct: 1277 ATQQPLPLPGLASEMQPQQLHRSQQQQQQQQQQQQQQQQQQQQQQQQQQHQPPSTQAQLR 1336
Query: 284 DSGSQNGEPPERWNESEK 337
S N PP W+ K
Sbjct: 1337 PSAPLNTSPPNSWHSHLK 1354
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 25.0 bits (52), Expect = 2.5
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -1
Query: 219 LLGAWGCKSRPASCCSRPVPFWLVTLLI 136
++G WG S CC++P + L +
Sbjct: 543 IIGKWGIISTAQKCCNKPCNIFQAVLSV 570
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 24.6 bits (51), Expect = 3.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -3
Query: 328 FIPTLWWFAILRSTVSTLIRGC 263
F TLW F I+++ +++GC
Sbjct: 95 FCYTLWTFDIVKNVTRVVVQGC 116
>AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein.
Length = 753
Score = 23.4 bits (48), Expect = 7.5
Identities = 16/67 (23%), Positives = 25/67 (37%)
Frame = +2
Query: 95 LEQSSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSD 274
L+Q+ + G + G Q A QPQ + + P ++Q Q
Sbjct: 376 LQQNGYVSASNGQSAQAGGPAGGQAQPSQSAAQQYQPQQQQQQQQQQQPQSQQQQQQQQQ 435
Query: 275 QGRDSGS 295
Q + SGS
Sbjct: 436 QQQQSGS 442
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 23.4 bits (48), Expect = 7.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 173 EQQLAGLDLQPQAPKSTGRYIPPHLRRQ 256
+QQL Q Q + RY+PP LR+Q
Sbjct: 270 QQQLQRRQQQQQQHQGQ-RYVPPQLRQQ 296
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,855
Number of Sequences: 2352
Number of extensions: 16922
Number of successful extensions: 81
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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