Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_C02
(744 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208983-1|BAD92220.1| 674|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 123 8e-28
U50553-1|AAB95637.1| 662|Homo sapiens helicase like protein 2 p... 121 2e-27
BC011819-1|AAH11819.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 121 2e-27
AL391647-2|CAI41416.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 121 2e-27
AF061337-1|AAC34298.1| 662|Homo sapiens DEAD box RNA helicase D... 121 2e-27
AF000983-1|AAC51830.1| 662|Homo sapiens dead box, X isoform pro... 121 2e-27
AF000982-1|AAC51829.1| 662|Homo sapiens dead box, X isoform pro... 121 2e-27
BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein. 109 1e-23
AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform pro... 109 1e-23
AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform pro... 109 1e-23
BC088362-1|AAH88362.1| 724|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 58 3e-08
BC047455-1|AAH47455.1| 690|Homo sapiens DDX4 protein protein. 58 3e-08
AY004154-1|AAF86585.1| 724|Homo sapiens DEAD box RNA helicase p... 58 3e-08
AL137462-1|CAB70750.1| 635|Homo sapiens hypothetical protein pr... 58 3e-08
AF262962-1|AAF72705.1| 724|Homo sapiens VASA protein protein. 58 3e-08
BC011047-1|AAH11047.1| 681|Homo sapiens growth arrest-specific ... 30 1.2
BC007624-1|AAH07624.1| 681|Homo sapiens growth arrest-specific ... 30 1.2
BC001782-1|AAH01782.1| 681|Homo sapiens growth arrest-specific ... 30 1.2
AK223602-1|BAD97322.1| 681|Homo sapiens growth arrest-specific ... 30 1.2
AK093386-1|BAC04150.1| 681|Homo sapiens protein ( Homo sapiens ... 30 1.2
Y09615-1|CAA70830.1| 399|Homo sapiens mTERF protein. 30 7.6
BX537565-1|CAD97783.1| 461|Homo sapiens hypothetical protein pr... 30 7.6
BC130391-1|AAI30392.1| 399|Homo sapiens mitochondrial transcrip... 30 7.6
BC130389-1|AAI30390.1| 399|Homo sapiens mitochondrial transcrip... 30 7.6
BC108648-1|AAI08649.1| 399|Homo sapiens mitochondrial transcrip... 30 7.6
BC068556-1|AAH68556.1| 461|Homo sapiens solute carrier family 4... 30 7.6
BC060850-1|AAH60850.1| 463|Homo sapiens SLC46A3 protein protein. 30 7.6
BC036662-1|AAH36662.1| 461|Homo sapiens solute carrier family 4... 30 7.6
BC000965-1|AAH00965.1| 399|Homo sapiens mitochondrial transcrip... 30 7.6
AL359454-3|CAM24029.1| 461|Homo sapiens novel protein protein. 30 7.6
AL359454-2|CAI17158.1| 463|Homo sapiens novel protein protein. 30 7.6
AK222730-1|BAD96450.1| 399|Homo sapiens mitochondrial transcrip... 30 7.6
AC003086-1|AAB83941.1| 399|Homo sapiens mitochondrial transcrip... 30 7.6
>AB208983-1|BAD92220.1| 674|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 3 variant protein.
Length = 674
Score = 123 bits (296), Expect = 8e-28
Identities = 75/210 (35%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Frame = +2
Query: 131 SNMSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQLQATSDQGRDS- 289
S MS+V +N GL+QQ AGLDL + S GRYIPPHLR + +DS
Sbjct: 11 SGMSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSS 70
Query: 290 GSQNGEPPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRNDRWKEPEPRAEERSN 469
G + + + ++ + ++ R+D + R +
Sbjct: 71 GWSSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRG-RSD-YDGIGSRGDRSGF 128
Query: 470 SRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDRVP 649
++ R + DE+DW+ PLP ER E LF GNTGINF KY+DIPVEA+G+ P
Sbjct: 129 GKFERGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCP 188
Query: 650 XCITSFEDVNLTELMRTNISLARYDKPTPV 739
I SF DV + E++ NI L RY +PTPV
Sbjct: 189 PHIESFSDVEMGEIIMGNIELTRYTRPTPV 218
>U50553-1|AAB95637.1| 662|Homo sapiens helicase like protein 2
protein.
Length = 662
Score = 121 bits (292), Expect = 2e-27
Identities = 74/208 (35%), Positives = 103/208 (49%), Gaps = 7/208 (3%)
Frame = +2
Query: 137 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQLQATSDQGRDS-GS 295
MS+V +N GL+QQ AGLDL + S GRYIPPHLR + +DS G
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW 60
Query: 296 QNGEPPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRNDRWKEPEPRAEERSNSR 475
+ + + ++ + ++ R+D + R + +
Sbjct: 61 SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRG-RSD-YDGIGSRGDRSGFGK 118
Query: 476 WPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXC 655
+ R + DE+DW+ PLP ER E LF GNTGINF KY+DIPVEA+G+ P
Sbjct: 119 FERGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPH 178
Query: 656 ITSFEDVNLTELMRTNISLARYDKPTPV 739
I SF DV + E++ NI L RY +PTPV
Sbjct: 179 IESFSDVEMGEIIMGNIELTRYTRPTPV 206
>BC011819-1|AAH11819.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked protein.
Length = 662
Score = 121 bits (292), Expect = 2e-27
Identities = 74/208 (35%), Positives = 103/208 (49%), Gaps = 7/208 (3%)
Frame = +2
Query: 137 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQLQATSDQGRDS-GS 295
MS+V +N GL+QQ AGLDL + S GRYIPPHLR + +DS G
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW 60
Query: 296 QNGEPPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRNDRWKEPEPRAEERSNSR 475
+ + + ++ + ++ R+D + R + +
Sbjct: 61 SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRG-RSD-YDGIGSRGDRSGFGK 118
Query: 476 WPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXC 655
+ R + DE+DW+ PLP ER E LF GNTGINF KY+DIPVEA+G+ P
Sbjct: 119 FERGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPH 178
Query: 656 ITSFEDVNLTELMRTNISLARYDKPTPV 739
I SF DV + E++ NI L RY +PTPV
Sbjct: 179 IESFSDVEMGEIIMGNIELTRYTRPTPV 206
>AL391647-2|CAI41416.1| 662|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked protein.
Length = 662
Score = 121 bits (292), Expect = 2e-27
Identities = 74/208 (35%), Positives = 103/208 (49%), Gaps = 7/208 (3%)
Frame = +2
Query: 137 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQLQATSDQGRDS-GS 295
MS+V +N GL+QQ AGLDL + S GRYIPPHLR + +DS G
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW 60
Query: 296 QNGEPPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRNDRWKEPEPRAEERSNSR 475
+ + + ++ + ++ R+D + R + +
Sbjct: 61 SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRG-RSD-YDGIGSRGDRSGFGK 118
Query: 476 WPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXC 655
+ R + DE+DW+ PLP ER E LF GNTGINF KY+DIPVEA+G+ P
Sbjct: 119 FERGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPH 178
Query: 656 ITSFEDVNLTELMRTNISLARYDKPTPV 739
I SF DV + E++ NI L RY +PTPV
Sbjct: 179 IESFSDVEMGEIIMGNIELTRYTRPTPV 206
>AF061337-1|AAC34298.1| 662|Homo sapiens DEAD box RNA helicase DDX3
protein.
Length = 662
Score = 121 bits (292), Expect = 2e-27
Identities = 74/208 (35%), Positives = 103/208 (49%), Gaps = 7/208 (3%)
Frame = +2
Query: 137 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQLQATSDQGRDS-GS 295
MS+V +N GL+QQ AGLDL + S GRYIPPHLR + +DS G
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW 60
Query: 296 QNGEPPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRNDRWKEPEPRAEERSNSR 475
+ + + ++ + ++ R+D + R + +
Sbjct: 61 SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRG-RSD-YDGIGSRGDRSGFGK 118
Query: 476 WPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXC 655
+ R + DE+DW+ PLP ER E LF GNTGINF KY+DIPVEA+G+ P
Sbjct: 119 FERGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPH 178
Query: 656 ITSFEDVNLTELMRTNISLARYDKPTPV 739
I SF DV + E++ NI L RY +PTPV
Sbjct: 179 IESFSDVEMGEIIMGNIELTRYTRPTPV 206
>AF000983-1|AAC51830.1| 662|Homo sapiens dead box, X isoform
protein.
Length = 662
Score = 121 bits (292), Expect = 2e-27
Identities = 74/208 (35%), Positives = 103/208 (49%), Gaps = 7/208 (3%)
Frame = +2
Query: 137 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQLQATSDQGRDS-GS 295
MS+V +N GL+QQ AGLDL + S GRYIPPHLR + +DS G
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATRGFYDKDSSGW 60
Query: 296 QNGEPPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRNDRWKEPEPRAEERSNSR 475
+ + + ++ + ++ R+D + R + +
Sbjct: 61 SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRG-RSD-YDGIGSRGDRSGFGK 118
Query: 476 WPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXC 655
+ R + DE+DW+ PLP ER E LF GNTGINF KY+DIPVEA+G+ P
Sbjct: 119 FERGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPH 178
Query: 656 ITSFEDVNLTELMRTNISLARYDKPTPV 739
I SF DV + E++ NI L RY +PTPV
Sbjct: 179 IESFSDVEMGEIIMGNIELTRYTRPTPV 206
>AF000982-1|AAC51829.1| 662|Homo sapiens dead box, X isoform
protein.
Length = 662
Score = 121 bits (292), Expect = 2e-27
Identities = 74/208 (35%), Positives = 103/208 (49%), Gaps = 7/208 (3%)
Frame = +2
Query: 137 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQLQATSDQGRDS-GS 295
MS+V +N GL+QQ AGLDL + S GRYIPPHLR + +DS G
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATRGFYDKDSSGW 60
Query: 296 QNGEPPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRNDRWKEPEPRAEERSNSR 475
+ + + ++ + ++ R+D + R + +
Sbjct: 61 SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRG-RSD-YDGIGSRGDRSGFGK 118
Query: 476 WPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXC 655
+ R + DE+DW+ PLP ER E LF GNTGINF KY+DIPVEA+G+ P
Sbjct: 119 FERGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPH 178
Query: 656 ITSFEDVNLTELMRTNISLARYDKPTPV 739
I SF DV + E++ NI L RY +PTPV
Sbjct: 179 IESFSDVEMGEIIMGNIELTRYTRPTPV 206
>BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein.
Length = 660
Score = 109 bits (261), Expect = 1e-23
Identities = 73/212 (34%), Positives = 100/212 (47%), Gaps = 11/212 (5%)
Frame = +2
Query: 137 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQLQATSDQGRDSGSQ 298
MS+V +N L+QQLA LDL + + S GRYIPPHLR + + +DS
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNREASKGFHDKDSSGW 60
Query: 299 NGEPPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRN-----DRWKEPEPRAEER 463
+ + S ++ + +R + R E
Sbjct: 61 SCSKDKDAYSSFGSRDSRGKPGYFSERGSGSRGRFDDRGRSDYDGIGNRERPGFGRFERS 120
Query: 464 SNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDR 643
+SRW V E+DW+ PLP ER E LF GNTGINF KY+DIPVEA+G
Sbjct: 121 GHSRWCDKSV--------EDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGSN 172
Query: 644 VPXCITSFEDVNLTELMRTNISLARYDKPTPV 739
P I +F D+++ E++ NI L RY +PTPV
Sbjct: 173 CPPHIENFSDIDMGEIIMGNIELTRYTRPTPV 204
>AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 109 bits (261), Expect = 1e-23
Identities = 73/212 (34%), Positives = 100/212 (47%), Gaps = 11/212 (5%)
Frame = +2
Query: 137 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQLQATSDQGRDSGSQ 298
MS+V +N L+QQLA LDL + + S GRYIPPHLR + + +DS
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNKEASKGFHDKDSSGW 60
Query: 299 NGEPPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRN-----DRWKEPEPRAEER 463
+ + S ++ + +R + R E
Sbjct: 61 SCSKDKDAYSSFGSRDSRGKPGYFSERGSGSRGRFDDRGRSDYDGIGNRERPGFGRFERS 120
Query: 464 SNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDR 643
+SRW V E+DW+ PLP ER E LF GNTGINF KY+DIPVEA+G
Sbjct: 121 GHSRWCDKSV--------EDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGSN 172
Query: 644 VPXCITSFEDVNLTELMRTNISLARYDKPTPV 739
P I +F D+++ E++ NI L RY +PTPV
Sbjct: 173 CPPHIENFSDIDMGEIIMGNIELTRYTRPTPV 204
>AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 109 bits (261), Expect = 1e-23
Identities = 73/212 (34%), Positives = 100/212 (47%), Gaps = 11/212 (5%)
Frame = +2
Query: 137 MSNVTNQNGTGLEQQLAGLDLQPQ------APKSTGRYIPPHLRRQLQATSDQGRDSGSQ 298
MS+V +N L+QQLA LDL + + S GRYIPPHLR + + +DS
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNKEASKGFHDKDSSGW 60
Query: 299 NGEPPERWNESEKWNXXXXXXXXXXXXXXXXXXXYEPPAPRN-----DRWKEPEPRAEER 463
+ + S ++ + +R + R E
Sbjct: 61 SCSKDKDAYSSFGSRDSRGKPGYFSERGSGSRGRFDDRGRSDYDGIGNRERPGFGRFERS 120
Query: 464 SNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDR 643
+SRW V E+DW+ PLP ER E LF GNTGINF KY+DIPVEA+G
Sbjct: 121 GHSRWCDKSV--------EDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGSN 172
Query: 644 VPXCITSFEDVNLTELMRTNISLARYDKPTPV 739
P I +F D+++ E++ NI L RY +PTPV
Sbjct: 173 CPPHIENFSDIDMGEIIMGNIELTRYTRPTPV 204
>BC088362-1|AAH88362.1| 724|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 4 protein.
Length = 724
Score = 58.0 bits (134), Expect = 3e-08
Identities = 31/68 (45%), Positives = 38/68 (55%)
Frame = +2
Query: 536 PLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXCITSFEDVNLTELMRTNISLA 715
P P DE +F TGINF KY+ I VE SG P I +FE+ NL + + NI+ A
Sbjct: 250 PPPEDEDS---IFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKA 306
Query: 716 RYDKPTPV 739
Y K TPV
Sbjct: 307 GYTKLTPV 314
>BC047455-1|AAH47455.1| 690|Homo sapiens DDX4 protein protein.
Length = 690
Score = 58.0 bits (134), Expect = 3e-08
Identities = 31/68 (45%), Positives = 38/68 (55%)
Frame = +2
Query: 536 PLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXCITSFEDVNLTELMRTNISLA 715
P P DE +F TGINF KY+ I VE SG P I +FE+ NL + + NI+ A
Sbjct: 216 PPPEDEDS---IFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKA 272
Query: 716 RYDKPTPV 739
Y K TPV
Sbjct: 273 GYTKLTPV 280
>AY004154-1|AAF86585.1| 724|Homo sapiens DEAD box RNA helicase
protein.
Length = 724
Score = 58.0 bits (134), Expect = 3e-08
Identities = 31/68 (45%), Positives = 38/68 (55%)
Frame = +2
Query: 536 PLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXCITSFEDVNLTELMRTNISLA 715
P P DE +F TGINF KY+ I VE SG P I +FE+ NL + + NI+ A
Sbjct: 250 PPPEDEDS---IFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKA 306
Query: 716 RYDKPTPV 739
Y K TPV
Sbjct: 307 GYTKLTPV 314
>AL137462-1|CAB70750.1| 635|Homo sapiens hypothetical protein
protein.
Length = 635
Score = 58.0 bits (134), Expect = 3e-08
Identities = 31/68 (45%), Positives = 38/68 (55%)
Frame = +2
Query: 536 PLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXCITSFEDVNLTELMRTNISLA 715
P P DE +F TGINF KY+ I VE SG P I +FE+ NL + + NI+ A
Sbjct: 161 PPPEDEDS---IFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKA 217
Query: 716 RYDKPTPV 739
Y K TPV
Sbjct: 218 GYTKLTPV 225
>AF262962-1|AAF72705.1| 724|Homo sapiens VASA protein protein.
Length = 724
Score = 58.0 bits (134), Expect = 3e-08
Identities = 31/68 (45%), Positives = 38/68 (55%)
Frame = +2
Query: 536 PLPRDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXCITSFEDVNLTELMRTNISLA 715
P P DE +F TGINF KY+ I VE SG P I +FE+ NL + + NI+ A
Sbjct: 250 PPPEDEDS---IFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKA 306
Query: 716 RYDKPTPV 739
Y K TPV
Sbjct: 307 GYTKLTPV 314
>BC011047-1|AAH11047.1| 681|Homo sapiens growth arrest-specific 2
like 1 protein.
Length = 681
Score = 30.3 bits (65), Expect(2) = 1.2
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 104 SSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGR 283
SS ++ PLG+ ++ GTG ++ L P S R PP LR Q + D+GR
Sbjct: 360 SSAQSGPLGTR----SDDTGTGPRRERPSRRLTTGTPASPRR--PPALRSQSRDRLDRGR 413
Query: 284 DSGSQNG 304
G+ G
Sbjct: 414 PRGAPGG 420
Score = 21.4 bits (43), Expect(2) = 1.2
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +2
Query: 410 PAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPR 547
P R + P P RS SR + R R ++ W VP R
Sbjct: 418 PGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSW-VPRGR 462
>BC007624-1|AAH07624.1| 681|Homo sapiens growth arrest-specific 2
like 1 protein.
Length = 681
Score = 30.3 bits (65), Expect(2) = 1.2
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 104 SSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGR 283
SS ++ PLG+ ++ GTG ++ L P S R PP LR Q + D+GR
Sbjct: 360 SSAQSGPLGTR----SDDTGTGPRRERPSRRLTTGTPASPRR--PPALRSQSRDRLDRGR 413
Query: 284 DSGSQNG 304
G+ G
Sbjct: 414 PRGAPGG 420
Score = 21.4 bits (43), Expect(2) = 1.2
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +2
Query: 410 PAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPR 547
P R + P P RS SR + R R ++ W VP R
Sbjct: 418 PGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSW-VPRGR 462
>BC001782-1|AAH01782.1| 681|Homo sapiens growth arrest-specific 2
like 1 protein.
Length = 681
Score = 30.3 bits (65), Expect(2) = 1.2
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 104 SSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGR 283
SS ++ PLG+ ++ GTG ++ L P S R PP LR Q + D+GR
Sbjct: 360 SSAQSGPLGTR----SDDTGTGPRRERPSRRLTTGTPASPRR--PPALRSQSRDRLDRGR 413
Query: 284 DSGSQNG 304
G+ G
Sbjct: 414 PRGAPGG 420
Score = 21.4 bits (43), Expect(2) = 1.2
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +2
Query: 410 PAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPR 547
P R + P P RS SR + R R ++ W VP R
Sbjct: 418 PGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSW-VPRGR 462
>AK223602-1|BAD97322.1| 681|Homo sapiens growth arrest-specific 2
like 1 isoform a variant protein.
Length = 681
Score = 30.3 bits (65), Expect(2) = 1.2
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 104 SSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGR 283
SS ++ PLG+ ++ GTG ++ L P S R PP LR Q + D+GR
Sbjct: 360 SSAQSGPLGTR----SDDTGTGPRRERPSRRLTTGTPASPRR--PPALRSQSRDRLDRGR 413
Query: 284 DSGSQNG 304
G+ G
Sbjct: 414 PRGAPGG 420
Score = 21.4 bits (43), Expect(2) = 1.2
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +2
Query: 410 PAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPR 547
P R + P P RS SR + R R ++ W VP R
Sbjct: 418 PGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSW-VPRGR 462
>AK093386-1|BAC04150.1| 681|Homo sapiens protein ( Homo sapiens
cDNA FLJ36067 fis, clone TESTI2019308, highly similar to
GAR22 PROTEIN. ).
Length = 681
Score = 30.3 bits (65), Expect(2) = 1.2
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 104 SSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGR 283
SS ++ PLG+ ++ GTG ++ L P S R PP LR Q + D+GR
Sbjct: 360 SSAQSGPLGTR----SDDTGTGPRRERPSRRLTTGTPASPRR--PPALRSQSRDRLDRGR 413
Query: 284 DSGSQNG 304
G+ G
Sbjct: 414 PRGAPGG 420
Score = 21.4 bits (43), Expect(2) = 1.2
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +2
Query: 410 PAPRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDENDWTVPLPR 547
P R + P P RS SR + R R ++ W VP R
Sbjct: 418 PGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSW-VPRGR 462
>Y09615-1|CAA70830.1| 399|Homo sapiens mTERF protein.
Length = 399
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +3
Query: 387 DVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 563
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>BX537565-1|CAD97783.1| 461|Homo sapiens hypothetical protein
protein.
Length = 461
Score = 30.3 bits (65), Expect = 7.6
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -3
Query: 370 ASVPFAFTIIPFLGFIPTLWWFAILRSTVSTLIRGCLQLPTQMRGYVATSTLRSL 206
A VPF FTI+PF L ++RST + C+ + G A ST +
Sbjct: 354 ARVPFLFTIVPFSVLRSML--SKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGI 406
>BC130391-1|AAI30392.1| 399|Homo sapiens mitochondrial
transcription termination factor protein.
Length = 399
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +3
Query: 387 DVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 563
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>BC130389-1|AAI30390.1| 399|Homo sapiens mitochondrial
transcription termination factor protein.
Length = 399
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +3
Query: 387 DVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 563
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>BC108648-1|AAI08649.1| 399|Homo sapiens mitochondrial
transcription termination factor protein.
Length = 399
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +3
Query: 387 DVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 563
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>BC068556-1|AAH68556.1| 461|Homo sapiens solute carrier family 46,
member 3 protein.
Length = 461
Score = 30.3 bits (65), Expect = 7.6
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -3
Query: 370 ASVPFAFTIIPFLGFIPTLWWFAILRSTVSTLIRGCLQLPTQMRGYVATSTLRSL 206
A VPF FTI+PF L ++RST + C+ + G A ST +
Sbjct: 354 ARVPFLFTIVPFSVLRSML--SKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGI 406
>BC060850-1|AAH60850.1| 463|Homo sapiens SLC46A3 protein protein.
Length = 463
Score = 30.3 bits (65), Expect = 7.6
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -3
Query: 370 ASVPFAFTIIPFLGFIPTLWWFAILRSTVSTLIRGCLQLPTQMRGYVATSTLRSL 206
A VPF FTI+PF L ++RST + C+ + G A ST +
Sbjct: 354 ARVPFLFTIVPFSVLRSML--SKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGI 406
>BC036662-1|AAH36662.1| 461|Homo sapiens solute carrier family 46,
member 3 protein.
Length = 461
Score = 30.3 bits (65), Expect = 7.6
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -3
Query: 370 ASVPFAFTIIPFLGFIPTLWWFAILRSTVSTLIRGCLQLPTQMRGYVATSTLRSL 206
A VPF FTI+PF L ++RST + C+ + G A ST +
Sbjct: 354 ARVPFLFTIVPFSVLRSML--SKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGI 406
>BC000965-1|AAH00965.1| 399|Homo sapiens mitochondrial
transcription termination factor, precursor protein.
Length = 399
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +3
Query: 387 DVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 563
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>AL359454-3|CAM24029.1| 461|Homo sapiens novel protein protein.
Length = 461
Score = 30.3 bits (65), Expect = 7.6
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -3
Query: 370 ASVPFAFTIIPFLGFIPTLWWFAILRSTVSTLIRGCLQLPTQMRGYVATSTLRSL 206
A VPF FTI+PF L ++RST + C+ + G A ST +
Sbjct: 354 ARVPFLFTIVPFSVLRSML--SKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGI 406
>AL359454-2|CAI17158.1| 463|Homo sapiens novel protein protein.
Length = 463
Score = 30.3 bits (65), Expect = 7.6
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -3
Query: 370 ASVPFAFTIIPFLGFIPTLWWFAILRSTVSTLIRGCLQLPTQMRGYVATSTLRSL 206
A VPF FTI+PF L ++RST + C+ + G A ST +
Sbjct: 354 ARVPFLFTIVPFSVLRSML--SKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGI 406
>AK222730-1|BAD96450.1| 399|Homo sapiens mitochondrial
transcription termination factor precursor variant
protein.
Length = 399
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +3
Query: 387 DVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 563
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
>AC003086-1|AAB83941.1| 399|Homo sapiens mitochondrial
transcription terminator factor protein.
Length = 399
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +3
Query: 387 DVRRIMNHRHHGMTAGKSRSQELKSVPIHAGLLTMCAELDLAKTRMIGQYRYLAMNDRN 563
++ + ++ R G+ + S+ LK+ + LLTM ++D+A+ R G + + N+++
Sbjct: 48 NIFKSVSFRLFGVKCHNTDSEPLKNEDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQD 106
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,740,578
Number of Sequences: 237096
Number of extensions: 2539728
Number of successful extensions: 7376
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 6855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7361
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -