Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_C02
         (744 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089613-1|AAL90351.1|  798|Drosophila melanogaster RE28061p pro...   113   3e-25
AE014297-778|AAF54262.1|  798|Drosophila melanogaster CG9748-PA ...   113   3e-25
M23560-1|AAA29013.1|  648|Drosophila melanogaster protein ( D.me...    51   2e-06
AE014134-2564|AAF53438.1|  661|Drosophila melanogaster CG3506-PA...    50   3e-06
X12945-1|CAA31405.1|  661|Drosophila melanogaster vasa protein.        49   6e-06
AE014297-942|AAF54379.1|  251|Drosophila melanogaster CG16777-PA...    31   1.7  
L14768-1|AAB39774.1| 1429|Drosophila melanogaster expanded protein.    30   2.9  
AY069068-1|AAL39213.1| 1427|Drosophila melanogaster GH08582p pro...    30   2.9  
AE014134-106|AAF51495.1| 1427|Drosophila melanogaster CG4114-PA ...    30   2.9  
AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC...    29   5.1  
AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical...    29   5.1  
BT023149-1|AAY55565.1|   83|Drosophila melanogaster IP03510p pro...    29   8.8  
BT001436-1|AAN71191.1|  819|Drosophila melanogaster GH24467p pro...    29   8.8  
AY051715-1|AAK93139.1|  534|Drosophila melanogaster LD24878p pro...    29   8.8  
AE014296-2920|AAF49332.2|  819|Drosophila melanogaster CG7571-PA...    29   8.8  
AE014296-219|AAF47471.2|  534|Drosophila melanogaster CG2277-PA ...    29   8.8  

>AY089613-1|AAL90351.1|  798|Drosophila melanogaster RE28061p
           protein.
          Length = 798

 Score =  113 bits (271), Expect = 3e-25
 Identities = 63/125 (50%), Positives = 76/125 (60%), Gaps = 17/125 (13%)
 Frame = +2

Query: 416 PRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDEN-----------------DWTVPLP 544
           PRNDRW+EPE  A    +    S    R+ + + E                  D+T    
Sbjct: 197 PRNDRWQEPERPAGFDGSEGGQSAGGNRSYNNRGERGGGGYNSRWKEGGGSNVDYTKLGA 256

Query: 545 RDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXCITSFEDVNLTELMRTNISLARYD 724
           RDER E+ LFG GNTGINF KYEDIPVEA+G  VP  ITSF+DV LTE++R N++LARYD
Sbjct: 257 RDERLEVELFGVGNTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYD 316

Query: 725 KPTPV 739
           KPTPV
Sbjct: 317 KPTPV 321



 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 14/52 (26%)
 Frame = +2

Query: 137 MSNVTNQNGTGLEQQLAGLDLQ--------PQAPKST------GRYIPPHLR 250
           MSN  NQNGTGLEQQ+AGLDL         P   K++      G Y+PPHLR
Sbjct: 1   MSNAINQNGTGLEQQVAGLDLNGGSADYSGPITSKTSTNSVTGGVYVPPHLR 52


>AE014297-778|AAF54262.1|  798|Drosophila melanogaster CG9748-PA
           protein.
          Length = 798

 Score =  113 bits (271), Expect = 3e-25
 Identities = 63/125 (50%), Positives = 76/125 (60%), Gaps = 17/125 (13%)
 Frame = +2

Query: 416 PRNDRWKEPEPRAEERSNSRWPSDDVRRTRSRKDEN-----------------DWTVPLP 544
           PRNDRW+EPE  A    +    S    R+ + + E                  D+T    
Sbjct: 197 PRNDRWQEPERPAGFDGSEGGQSAGGNRSYNNRGERGGGGYNSRWKEGGGSNVDYTKLGA 256

Query: 545 RDERQELLLFGTGNTGINFSKYEDIPVEASGDRVPXCITSFEDVNLTELMRTNISLARYD 724
           RDER E+ LFG GNTGINF KYEDIPVEA+G  VP  ITSF+DV LTE++R N++LARYD
Sbjct: 257 RDERLEVELFGVGNTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYD 316

Query: 725 KPTPV 739
           KPTPV
Sbjct: 317 KPTPV 321



 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 14/52 (26%)
 Frame = +2

Query: 137 MSNVTNQNGTGLEQQLAGLDLQ--------PQAPKST------GRYIPPHLR 250
           MSN  NQNGTGLEQQ+AGLDL         P   K++      G Y+PPHLR
Sbjct: 1   MSNAINQNGTGLEQQVAGLDLNGGSADYSGPITSKTSTNSVTGGVYVPPHLR 52


>M23560-1|AAA29013.1|  648|Drosophila melanogaster protein (
           D.melanogaster antigenMab46F11 (vasa) mRNA, complete
           cds. ).
          Length = 648

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
 Frame = +2

Query: 455 EERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTG-NTGINFSKYEDIPVEA 631
           ++ +N+   ++DV R R      ++ +P P      + +F +G  +GI+FSKY +IPV+ 
Sbjct: 170 DDINNNNNIAEDVERKR------EFYIP-PEPSNDAIEIFSSGIASGIHFSKYNNIPVKV 222

Query: 632 SGDRVPXCITSFEDVNLTELMRTNISLARYDKPTPV 739
           +G  VP  I  F   +L +++  N++ + Y  PTP+
Sbjct: 223 TGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPI 258


>AE014134-2564|AAF53438.1|  661|Drosophila melanogaster CG3506-PA
           protein.
          Length = 661

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = +2

Query: 518 ENDWTVPLPRDERQELLLFGTG-NTGINFSKYEDIPVEASGDRVPXCITSFEDVNLTELM 694
           + ++ +P P      + +F +G  +GI+FSKY +IPV+ +G  VP  I  F   +L +++
Sbjct: 198 KREFYIP-PEPSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQHFTSADLRDII 256

Query: 695 RTNISLARYDKPTPV 739
             N++ + Y  PTP+
Sbjct: 257 IDNVNKSGYKIPTPI 271


>X12945-1|CAA31405.1|  661|Drosophila melanogaster vasa protein.
          Length = 661

 Score = 49.2 bits (112), Expect = 6e-06
 Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
 Frame = +2

Query: 455 EERSNSRWPSDDVRRTRSRKDENDWTVPLPRDERQELLLFGTG-NTGINFSKYEDIPVEA 631
           ++ +N+   ++DV R R      ++ +P P      + +F +G  +GI+FSKY +IPV+ 
Sbjct: 183 DDINNNNNIAEDVERKR------EFYIP-PEPSNDAIEIFSSGIASGIHFSKYNNIPVKV 235

Query: 632 SGDRVPXCITSFEDVNLTELMRTNISLARYDKPTPV 739
           +G  VP  I  F   +L +++  N++ + +  PTP+
Sbjct: 236 TGSDVPQPIQHFTSADLRDIIIDNVNKSGFKIPTPI 271


>AE014297-942|AAF54379.1|  251|Drosophila melanogaster CG16777-PA
           protein.
          Length = 251

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = +2

Query: 116 NVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGRDSGS 295
           N+   SN+ N++N N +     LA    Q Q          PH +  L   S+ G  +G+
Sbjct: 120 NISNISNIGNISNSNHSNAAYSLAVHSYQKQIESPANPSHVPHHQMDLSPLSENGSPNGT 179

Query: 296 QNGEPP 313
              + P
Sbjct: 180 PGAQTP 185


>L14768-1|AAB39774.1| 1429|Drosophila melanogaster expanded protein.
          Length = 1429

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +2

Query: 140 SNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGRDSGSQNGEPPER 319
           S+V   +   LE+QLA L ++PQ   S G  I  +   Q  +      DS +    P  +
Sbjct: 501 SSVGQMSLKDLEEQLAALSVRPQDASSNGATIVTNSSVQRNSMGTTANDSSTATDSPSSQ 560

Query: 320 WN 325
            N
Sbjct: 561 HN 562


>AY069068-1|AAL39213.1| 1427|Drosophila melanogaster GH08582p
           protein.
          Length = 1427

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +2

Query: 140 SNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGRDSGSQNGEPPER 319
           S+V   +   LE+QLA L ++PQ   S G  I  +   Q  +      DS +    P  +
Sbjct: 501 SSVGQMSLKDLEEQLAALSVRPQDASSNGATIVTNSSVQRNSMGTTANDSSTATDSPSSQ 560

Query: 320 WN 325
            N
Sbjct: 561 HN 562


>AE014134-106|AAF51495.1| 1427|Drosophila melanogaster CG4114-PA
           protein.
          Length = 1427

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +2

Query: 140 SNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGRDSGSQNGEPPER 319
           S+V   +   LE+QLA L ++PQ   S G  I  +   Q  +      DS +    P  +
Sbjct: 501 SSVGQMSLKDLEEQLAALSVRPQDASSNGATIVTNSSVQRNSMGTTANDSSTATDSPSSQ 560

Query: 320 WN 325
            N
Sbjct: 561 HN 562


>AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC,
           isoform C protein.
          Length = 1526

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
 Frame = +2

Query: 104 SSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQA---PKSTGRYIPPHLRRQLQATSD 274
           S+  N+ L S  ++     GT   QQ        +A   P  TGR+IPP LR Q   T  
Sbjct: 491 SNSSNISLNSGSASAAG-GGTPHSQQQQERSQAGKASTPPPITGRWIPPSLRPQHGLTQS 549

Query: 275 QGRDS------GSQNGEPPERWNE 328
           +  D+      G  N   PE++ E
Sbjct: 550 EKNDAVFRRVRGILNKLTPEKFQE 573


>AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1526

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
 Frame = +2

Query: 104 SSQKNVPLGSNMSNVTNQNGTGLEQQLAGLDLQPQA---PKSTGRYIPPHLRRQLQATSD 274
           S+  N+ L S  ++     GT   QQ        +A   P  TGR+IPP LR Q   T  
Sbjct: 491 SNSSNISLNSGSASAAG-GGTPHSQQQQERSQAGKASTPPPITGRWIPPSLRPQHGLTQS 549

Query: 275 QGRDS------GSQNGEPPERWNE 328
           +  D+      G  N   PE++ E
Sbjct: 550 EKNDAVFRRVRGILNKLTPEKFQE 573


>BT023149-1|AAY55565.1|   83|Drosophila melanogaster IP03510p
          protein.
          Length = 83

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 21 KLSLSCGFVNLCLCKIHC 74
          KLS+SC +V +C+ + HC
Sbjct: 28 KLSISCSYVCVCILRTHC 45


>BT001436-1|AAN71191.1|  819|Drosophila melanogaster GH24467p
           protein.
          Length = 819

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = +2

Query: 125 LGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGRDSGS 295
           LG+ +S+  N NGTG    L+      QAP + G  +PP      ++  D   + GS
Sbjct: 95  LGNILSS--NNNGTGNGHSLSEKYAHEQAPLTGGYKLPPRSSESEESDFDSDLNGGS 149


>AY051715-1|AAK93139.1|  534|Drosophila melanogaster LD24878p
           protein.
          Length = 534

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 198 CSPRLLRVLVATYPRICVGSCRQPLIKVETVDLRMANHQSVGMNPR 335
           C+P L    +++Y ++CV +  Q  +     D R+  H   G +PR
Sbjct: 475 CTPTLWSSFISSYAQLCVPTVEQ--VAQTAPDKRIVCHNPYGFSPR 518


>AE014296-2920|AAF49332.2|  819|Drosophila melanogaster CG7571-PA
           protein.
          Length = 819

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = +2

Query: 125 LGSNMSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLQATSDQGRDSGS 295
           LG+ +S+  N NGTG    L+      QAP + G  +PP      ++  D   + GS
Sbjct: 95  LGNILSS--NNNGTGNGHSLSEKYAHEQAPLTGGYKLPPRSSESEESDFDSDLNGGS 149


>AE014296-219|AAF47471.2|  534|Drosophila melanogaster CG2277-PA
           protein.
          Length = 534

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 198 CSPRLLRVLVATYPRICVGSCRQPLIKVETVDLRMANHQSVGMNPR 335
           C+P L    +++Y ++CV +  Q  +     D R+  H   G +PR
Sbjct: 475 CTPTLWSSFISSYAQLCVPTVEQ--VAQTAPDKRIVCHNPYGFSPR 518


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,691,218
Number of Sequences: 53049
Number of extensions: 766457
Number of successful extensions: 2819
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2816
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)