Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_B18
(749 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.7
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 30 2.3
SB_17285| Best HMM Match : rve (HMM E-Value=1.3e-16) 30 2.3
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 30 2.3
SB_48617| Best HMM Match : Drf_FH1 (HMM E-Value=3.7) 30 2.3
SB_17421| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_2890| Best HMM Match : rve (HMM E-Value=0.044) 30 2.3
SB_36929| Best HMM Match : rve (HMM E-Value=1.2e-16) 29 3.0
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_57594| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_28682| Best HMM Match : Hydrolase (HMM E-Value=1.2e-19) 29 5.3
SB_47026| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 28 9.3
SB_39538| Best HMM Match : VWA (HMM E-Value=0) 28 9.3
SB_12328| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_10676| Best HMM Match : Skp1_POZ (HMM E-Value=9.8e-05) 28 9.3
>SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 31.1 bits (67), Expect = 1.00
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 136 TTPASRTTWPTPALGTSRVRLKPAWEVPSPGSTLSSNPTVPSALWTTP 279
T+PAS T P+ R R++ E P PGS+ S+ T PS L T P
Sbjct: 578 TSPASDTI---PSNRGPRERVEMNGEAPCPGSSSSTTLTGPSTLSTVP 622
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/56 (37%), Positives = 25/56 (44%)
Frame = +1
Query: 136 TTPASRTTWPTPALGTSRVRLKPAWEVPSPGSTLSSNPTVPSALWTTPPMT*TDST 303
TTP TT PA T KP P PG+T + PT + TT P T +T
Sbjct: 101 TTPTKPTTTTPPATTTPT---KPTTTTP-PGTTTPTKPTTTTPPATTTPTKPTTTT 152
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 91 PTAQWCTHH*LEQTLTTPASRTTWPTPALGTSRVRLKPAWEVPSPGSTLSSNPTVPSALW 270
P +Q C HH TPA+ PTP L T+ + L+ + E P P+ P A+
Sbjct: 1137 PPSQTC-HH--TNRTATPATTPGVPTPDLATAALALQVSPEEPDAAEE-KQGPSTPEAMT 1192
Query: 271 TTPP 282
P
Sbjct: 1193 LPSP 1196
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 91 PTAQWCTHH*LEQTLTTPASRTTWPTPALGTSRVRLKPAWEVPSPGSTLSSNPTVPSALW 270
P +Q C HH TPA+ PTP L T+ + L+ + E P P+ P A+
Sbjct: 1505 PPSQTC-HH--TNRTATPATTPGVPTPDLATAALALQVSPEEPDAAEE-KQGPSTPEAMT 1560
Query: 271 TTPP 282
P
Sbjct: 1561 LPSP 1564
>SB_17285| Best HMM Match : rve (HMM E-Value=1.3e-16)
Length = 560
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 91 PTAQWCTHH*LEQTLTTPASRTTWPTPALGTSRVRLKPAWEVPSPGSTLSSNPTVPSALW 270
P +Q C HH TPA+ PTP L T+ + L+ + E P P+ P A+
Sbjct: 475 PPSQTC-HH--TNRTATPATTPGVPTPDLATAALALQVSPEEPDAAEE-KQGPSTPEAMT 530
Query: 271 TTPP 282
P
Sbjct: 531 LPSP 534
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 172 ALGTSRVRLKPAWEVPSPGSTLSSNPTVP 258
A G S P+W P+PGS +S PT P
Sbjct: 372 ASGMSPGGFSPSWMSPTPGSPVSPGPTSP 400
>SB_48617| Best HMM Match : Drf_FH1 (HMM E-Value=3.7)
Length = 477
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 91 PTAQWCTHH*LEQTLTTPASRTTWPTPALGTSRVRLKPAWEVPSPGSTLSSNPTVPSALW 270
P +Q C HH TPA+ PTP L T+ + L+ + E P P+ P A+
Sbjct: 215 PPSQTC-HH--TNRTATPATTPGVPTPDLATAALALQVSPEEPDAAEE-KQGPSTPEAMT 270
Query: 271 TTPP 282
P
Sbjct: 271 LPSP 274
>SB_17421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 555
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +1
Query: 136 TTPASRTTWP--TPALGTSRVRLKPAWEVPSPGSTLSSNPTVPSALWTTPP 282
TTP P TP R P WE P + S+ P + LW PP
Sbjct: 277 TTPLWEKIRPSATPLWEKIRPSATPLWEKIRPSAVYSARPNQAADLWPMPP 327
>SB_2890| Best HMM Match : rve (HMM E-Value=0.044)
Length = 336
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 91 PTAQWCTHH*LEQTLTTPASRTTWPTPALGTSRVRLKPAWEVPSPGSTLSSNPTVPSALW 270
P +Q C HH TPA+ PTP L T+ + L+ + E P P+ P A+
Sbjct: 251 PPSQTC-HH--TNRTATPATTPGVPTPDLATAALALQVSPEEPDAAEE-KQGPSTPEAMT 306
Query: 271 TTPP 282
P
Sbjct: 307 LPSP 310
>SB_36929| Best HMM Match : rve (HMM E-Value=1.2e-16)
Length = 913
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 91 PTAQWCTHH*LEQTLTTPASRTTWPTPALGTSRVRLKPAWEVPSPGSTLSSNPTVPSAL- 267
P +Q C HH TPA+ PTP L T+ + L+ + E P P+ P A+
Sbjct: 839 PPSQTC-HH--TNRTATPATTPGVPTPDLATAALALQVSPEEPDAAEE-KQGPSTPEAMN 894
Query: 268 WTTPP 282
+PP
Sbjct: 895 LPSPP 899
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +1
Query: 130 TLTTPASRT-TWPTPALGTSRV--RLKPAWEVPSPGSTLSSNPTVPSALWTTP-PMT*TD 297
T TP + T T P+P TS + P PSP + + PT + TTP P T T
Sbjct: 27 TKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTP 86
Query: 298 ST 303
+T
Sbjct: 87 TT 88
>SB_57594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1386
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 109 THH*LEQTLTTPASRTTWPTPALGTSRVRLKPAWEVPSPGSTLSSN 246
TH +EQTLT A R P + S R+ + P PG + SN
Sbjct: 811 THGKIEQTLTARAERNRKPPGVITCSTNRIVHNTQEPRPGPSGVSN 856
>SB_28682| Best HMM Match : Hydrolase (HMM E-Value=1.2e-19)
Length = 219
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 718 MYRXVTIFTYKSLDAIKGSINYQYERWA 635
MYR +T+ +L ++GS+ YQY + A
Sbjct: 1 MYRLITLDATNTLFRVRGSVGYQYAKSA 28
>SB_47026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +1
Query: 136 TTPASRTTWPT--PALGTSRVRLKP-AWEVPSPGSTLSSN-PTVPSALWTTPP 282
T P++ TT P P + ++ + P VPS G+T+ SN TVP+ T PP
Sbjct: 118 TVPSNGTTVPYNGPTVPSNGATVPPNGATVPSNGTTVPSNGTTVPTNGTTVPP 170
>SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 1269
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 139 TPASRTTWPTPALGTSRVRLKPAWEVPSPGSTLSSNPTVP 258
+P+ T T T++ LK + P P S +S+PT+P
Sbjct: 262 SPSPTATTATTTTATTQQTLKGESQSPEPDSESNSSPTLP 301
>SB_39538| Best HMM Match : VWA (HMM E-Value=0)
Length = 3208
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 202 PAWEVP-SPGSTLSSNPTVPSALWTTP 279
P +P SPGS + NP +PSA+ T P
Sbjct: 1417 PGSGIPGSPGSGIPGNPALPSAIPTLP 1443
>SB_12328| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 518 GHSFFVWSHIRRPH 559
GHSFF WS +RR H
Sbjct: 342 GHSFFEWSLLRRKH 355
>SB_10676| Best HMM Match : Skp1_POZ (HMM E-Value=9.8e-05)
Length = 123
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 524 NDHAVHSASVYGRVGCAVDSGSNQG 450
N H+ H V+G GCAV + +N G
Sbjct: 59 NKHSTHILGVHGFPGCAVRTHANHG 83
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,455,409
Number of Sequences: 59808
Number of extensions: 338638
Number of successful extensions: 1153
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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