Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_B17
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    25   0.46 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.46 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.46 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    25   0.80 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    25   0.80 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    25   0.80 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.8  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   5.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.8  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -1

Query: 699 YLTFQNFYLITPFLAIRDTYP----SVKMKLTHWSNVNTTNLLT 580
           Y  F + + ++ FL  R   P    S++  L +W + N+TN+++
Sbjct: 181 YKVFVDLFNLSTFLIPRSYIPPLSTSMRSHLCNWGSANSTNIVS 224


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -1

Query: 699 YLTFQNFYLITPFLAIRDTYP----SVKMKLTHWSNVNTTNLLT 580
           Y  F + + ++ FL  R   P    S++  L +W + N+TN+++
Sbjct: 341 YKVFVDLFNLSTFLIPRSYIPPLSTSMRSHLCNWGSANSTNIVS 384


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -1

Query: 699 YLTFQNFYLITPFLAIRDTYP----SVKMKLTHWSNVNTTNLLT 580
           Y  F + + ++ FL  R   P    S++  L +W + N+TN+++
Sbjct: 341 YKVFVDLFNLSTFLIPRSYIPPLSTSMRSHLCNWGSANSTNIVS 384


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 336 PGGPYSAFAGKDATRGLATGQVAASENDEYDDVSDLGSDE 455
           P G Y      +A  G  +G+      D Y D+S LG++E
Sbjct: 438 PAGSYCDVISGNAENGSCSGKTITVGGDGYADIS-LGANE 476


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 336 PGGPYSAFAGKDATRGLATGQVAASENDEYDDVSDLGSDE 455
           P G Y      +A  G  +G+      D Y D+S LG++E
Sbjct: 439 PAGSYCDVISGNAENGSCSGKTITVGGDGYADIS-LGANE 477


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 336 PGGPYSAFAGKDATRGLATGQVAASENDEYDDVSDLGSDE 455
           P G Y      +A  G  +G+      D Y D+S LG++E
Sbjct: 439 PAGSYCDVISGNAENGSCSGKTITVGGDGYADIS-LGANE 477


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 397 RLLHQKTMNTTMLAIW 444
           R+ H+K +NTT L +W
Sbjct: 4   RINHKKFINTTKLLLW 19


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +1

Query: 46  YTKWRTKLIAPQYGTN 93
           + ++RTK++A  +GTN
Sbjct: 100 FNEFRTKILAQVHGTN 115


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 673 NYPVPSDTRHL 641
           N+PVP  T+H+
Sbjct: 525 NFPVPQKTKHV 535


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 685 KLLPNYPVPSDTRHLP 638
           ++LP +P P    HLP
Sbjct: 272 QVLPQWPSPIGASHLP 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,816
Number of Sequences: 336
Number of extensions: 2967
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)