Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_B13
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       27   0.15 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   3.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.5  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.9  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 387 ESRDGGAVHGSYSLVE-PDGSVRKVDYTAD 473
           E    G + G Y +V   DGS+R V YTAD
Sbjct: 209 ERTSDGFIVGEYGVVSHDDGSLRGVRYTAD 238


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 414 GSYSLVEPDGSVRKVDYTADDHHGFNA 494
           GSY    P+G + + D +    +G++A
Sbjct: 142 GSYDPYSPNGKIGREDLSPSSLNGYSA 168


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +3

Query: 309 DTYAHPKYDYAYSVADPHTGDHKSQHESRDGGAVHGSY 422
           D +A     YA++  DPH  +  S  +  D   + G Y
Sbjct: 200 DPFACTHVIYAFATIDPHNFNMISNDDESD--IIQGGY 235


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/21 (38%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
 Frame = +3

Query: 105 PAIP---PRCGSFVPVASSVM 158
           P +P   P+CG +VP  +S +
Sbjct: 627 PPVPKDFPQCGDYVPSGNSTV 647


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = -1

Query: 394 RLSCWLLWSPVW 359
           +L CW+ + P W
Sbjct: 169 KLQCWIEFHPQW 180


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 300 HGHDTYAHPKYDYAYS 347
           HGH+T +H  Y   Y+
Sbjct: 291 HGHNTSSHNYYAQNYA 306


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 86  SQHGAKDEHFGEHFATRETE 27
           S H  K+ H+ EH     TE
Sbjct: 564 SNHMVKNSHYKEHIMRSITE 583


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,905
Number of Sequences: 336
Number of extensions: 2858
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)