Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_B13
(574 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0125 - 1317328-1318049,1318061-1319035,1320994-1321143,132... 31 0.49
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 31 0.65
11_06_0195 - 21138029-21138389,21139796-21140052 31 0.86
06_03_0218 + 18219956-18220555 31 0.86
06_03_0220 + 18276641-18276915,18278445-18278676 30 1.1
10_08_0243 - 16124790-16125361,16126358-16126547 30 1.5
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 2.6
06_02_0069 - 11126235-11127538,11128361-11128421 29 3.5
11_03_0109 - 10103163-10103262,10103469-10103800,10103963-10104121 28 4.6
05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722 28 4.6
04_03_0799 - 19805190-19805749,19806316-19806403 28 4.6
12_02_0204 - 15502331-15502459,15502875-15503129 28 6.1
11_06_0231 + 21531169-21531674,21533607-21533681,21535426-21535741 28 6.1
11_04_0474 + 18162538-18163731,18163800-18163855,18163951-181640... 28 6.1
11_01_0019 + 135610-136296,136736-137275,137367-137518,137683-13... 28 6.1
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 28 6.1
05_03_0361 - 12961101-12961201,12961683-12961772,12961910-129619... 28 6.1
04_03_0705 + 18880541-18880906,18881280-18881303 28 6.1
03_05_0845 - 28155065-28155374,28156201-28156342,28156375-281565... 28 6.1
01_01_0308 + 2519384-2519726,2520350-2520663,2520931-2521110 28 6.1
11_01_0409 - 3096372-3097052,3097324-3098652 27 8.0
10_08_0295 - 16581014-16583071 27 8.0
08_02_0707 - 20212190-20214592 27 8.0
04_04_1591 + 34647817-34648416 27 8.0
03_03_0092 - 14374263-14374384,14374485-14374722 27 8.0
03_02_0942 - 12595108-12595347,12596227-12596362,12596917-12597083 27 8.0
03_02_0213 + 6480521-6480644,6482347-6482499,6482582-6482980,648... 27 8.0
02_05_0267 - 27284781-27284957,27285082-27285126,27285858-272859... 27 8.0
02_04_0607 - 24302582-24303075,24303150-24304197 27 8.0
02_01_0726 + 5440341-5440661,5441574-5441620,5442917-5442977,544... 27 8.0
01_03_0155 + 13274537-13274741,13274827-13274864,13274909-132749... 27 8.0
>04_01_0125 -
1317328-1318049,1318061-1319035,1320994-1321143,
1322242-1322546,1323447-1323565
Length = 756
Score = 31.5 bits (68), Expect = 0.49
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -3
Query: 251 QGRRGLVELHGQWVRHNEQGRNEPRHSVPGHHDGRCDWDETA-AAWWYGRRPALAASQHG 75
QG++ ++E+H RH R +P GR DWDE W G ++A +
Sbjct: 30 QGKQWIIEMHHDGERHALLRRIQPLIGPEFSSSGRLDWDEAVDCCRWEGVTCSVAGRRRE 89
Query: 74 A 72
A
Sbjct: 90 A 90
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 31.1 bits (67), Expect = 0.65
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 255 VHAAPIVHAASLGYAHGHDTYAHPKYDYAYSVADPHTG-DHKSQHESRDGGAVHGSYSLV 431
V AA + SL D PK ++ + T H+S HE+R G + SL+
Sbjct: 2646 VEAATEIEDGSLN--RDQDDITSPKASQEDALEEVGTELPHESLHENRHGAKDEQTLSLI 2703
Query: 432 EPD-GSVRKVDYTAD 473
EPD G+ K+ AD
Sbjct: 2704 EPDTGNAEKLPNEAD 2718
>11_06_0195 - 21138029-21138389,21139796-21140052
Length = 205
Score = 30.7 bits (66), Expect = 0.86
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 417 YHVRHHHRGSRAGSCGHRCGGQPR-SKHSRIWGEHRCRGHGRSQEKPRGRWGQR 259
+H +HH + + G GG+ + +RI E + RG + RWG+R
Sbjct: 37 FHQQHHRQAVASAEAGAGAGGEVSPAVAARIRLEEKLRGAAAAPSSSLSRWGRR 90
>06_03_0218 + 18219956-18220555
Length = 199
Score = 30.7 bits (66), Expect = 0.86
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = -2
Query: 447 RNHQARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPR--- 277
R + R GSS +R R SR G G GG + R + G GR + + R
Sbjct: 120 REGRRRGGSSGGLRGKRRASRGGGGGGDAGGGDGAAGRRTVEAAQAAGGGRQRGRERRAT 179
Query: 276 GRWGQRGLXG 247
GRW RG G
Sbjct: 180 GRW--RGTTG 187
>06_03_0220 + 18276641-18276915,18278445-18278676
Length = 168
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +3
Query: 105 PAIPPRCGSFVPVASSVMMPRHTMPRLITPLLIMPHPLSMQLH*STPPLXVHAAPIVHAA 284
P IP R G S+ +P PR PL + P PL++ PPL AA AA
Sbjct: 106 PLIPSRSGRRPSGEDSLPLPFLPFPRAPPPLAVPP-PLAV------PPLRPSAAAFAPAA 158
Query: 285 SLGYAHGH 308
++ GH
Sbjct: 159 AVSRVAGH 166
>10_08_0243 - 16124790-16125361,16126358-16126547
Length = 253
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 161 HHDGRCDWDETAAAWWYGRRPALAASQHGAKD 66
HH D AAA W GRRPA A S+ G ++
Sbjct: 3 HHPSALDL--AAAAAWKGRRPAAAKSREGEEE 32
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Frame = +3
Query: 204 MPHPLSMQLH*STPPLXVHAAPIVHAASLGYAHGHDTYA--HPKYDYAYSVADPHTGDHK 377
+PH + ++ +T P+ ++PI SL Y+ Y+ P Y+ S P + +
Sbjct: 1639 LPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYN 1698
Query: 378 SQHESRDGGAVHGSYSLVEPDGS 446
S SYS P S
Sbjct: 1699 PTSPSYSYSPTSPSYSPTSPSYS 1721
>06_02_0069 - 11126235-11127538,11128361-11128421
Length = 454
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +3
Query: 297 AHGHDTY--AHPKYDYAYSVADPHTG-DHKSQHESRDGGAV 410
AHGHD A K+ Y Y+ +P G +H + H D V
Sbjct: 362 AHGHDHVHLAKKKFSYYYTFGNPEDGHEHANHHGGYDNHIV 402
>11_03_0109 - 10103163-10103262,10103469-10103800,10103963-10104121
Length = 196
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = -2
Query: 435 ARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWGQRG 256
ARRG R H SR S CG P S+IW R G ++++ R RW Q G
Sbjct: 3 ARRGGD---RLQHGNSRGESV---CGS-PNPLPSQIWLNIRELEKGAARQRGRWRWQQEG 55
>05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722
Length = 740
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 218 QWVRHNEQGRNEPRHSVPGHHDGRCDWD 135
Q RHNE G +E PG+H C ++
Sbjct: 454 QNARHNEDGVDESSDGGPGYHVNACSYE 481
>04_03_0799 - 19805190-19805749,19806316-19806403
Length = 215
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -2
Query: 375 CGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKP 280
C H C P+ K H C GHG KP
Sbjct: 122 CYHCCPAPPKPKPKPCECTHHCGGHGGGCNKP 153
>12_02_0204 - 15502331-15502459,15502875-15503129
Length = 127
Score = 27.9 bits (59), Expect = 6.1
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 415 PCTAPPSRLSCW 380
PC+ PP+RL CW
Sbjct: 54 PCSPPPARLHCW 65
>11_06_0231 + 21531169-21531674,21533607-21533681,21535426-21535741
Length = 298
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 90 RQRWSPAIPPRCGSFVPVASSVMMP 164
R+RW P++PPR G +A++ M P
Sbjct: 260 RRRWLPSLPPRIGP--TIAATTMAP 282
>11_04_0474 +
18162538-18163731,18163800-18163855,18163951-18164011,
18164107-18165495,18166024-18166635,18166706-18166852,
18166941-18167209,18167322-18167412,18167500-18167757,
18168376-18168450,18168937-18168945
Length = 1386
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 378 SCG-HRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWGQR 259
SC HRC G ++HSR + +G S+ + GR G+R
Sbjct: 13 SCSMHRCTGSTNAQHSRNAQANHRQGAQGSRRRRFGRGGRR 53
>11_01_0019 +
135610-136296,136736-137275,137367-137518,137683-137959
Length = 551
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 18 SHLFCFSRCKMFTKVFVLSAVLACRQRWSPAIPPRCGSFVPVASSVMMPRH 170
+H FCFS K KV +L +L + CG F V S ++ H
Sbjct: 318 AHRFCFSCMKEHVKVKLLHGMLPACPQDGCTTKLNCGGFKDVPISTVITDH 368
>10_06_0002 +
9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 155 DGRCDWDETAAAWWYGRRPALAASQHGAKDE 63
DGR W A W G+RPA + G E
Sbjct: 21 DGRRPWTAKDARWRGGQRPAATPADEGRSQE 51
>05_03_0361 -
12961101-12961201,12961683-12961772,12961910-12961980,
12962079-12962158,12962264-12962324,12963620-12963681,
12963826-12963833,12964273-12964609,12964946-12965089,
12965235-12965339
Length = 352
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 278 VDDGGSVDXQGRRGLVELHGQWVRHNEQGR 189
+ DGG +G RG+VE G W R R
Sbjct: 153 ITDGGGEAERGERGVVEEEGLWWREGTADR 182
>04_03_0705 + 18880541-18880906,18881280-18881303
Length = 129
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +1
Query: 145 HRPS*CPGTLCLGSLRPC-SLCRTHCPCSS 231
HR G + G LRP S CR HCP S
Sbjct: 84 HRRRELAGKIPFGPLRPDGSACRPHCPAKS 113
>03_05_0845 -
28155065-28155374,28156201-28156342,28156375-28156505,
28156591-28156784,28156859-28156969,28157234-28157399,
28157501-28157668,28157766-28158787
Length = 747
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 399 GGAVHGSYSLVEPDGSVRKVDYTADDHHGFNA 494
GG + G V PDG+ + + AD HG A
Sbjct: 93 GGRIEGQGVFVGPDGATYRGAWAADRRHGVGA 124
>01_01_0308 + 2519384-2519726,2520350-2520663,2520931-2521110
Length = 278
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 194 GRNEPRHSVPGHHDGRCDWDETAAAWWYGRRPALAASQHGAKDE 63
G P++ G DG DW+ A+ +R AAS G +D+
Sbjct: 176 GTTPPKNVFSGAEDGGHDWNVAASVSALEKREDWAASSGGERDK 219
>11_01_0409 - 3096372-3097052,3097324-3098652
Length = 669
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 348 VADPHTGDHKSQHESRDGGAVHGSYSLVEPDGS-VRKVDYTADDHH 482
V + H G H H+S+ + G Y + DGS + +VD +D H
Sbjct: 428 VYNHHQGHHTVIHDSQRNLVLTGPYRAISADGSFLIEVDTNNEDVH 473
>10_08_0295 - 16581014-16583071
Length = 685
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = -2
Query: 438 QARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSKHSRIWGEHRCRG---HGRSQEKPRGRW 268
+A G+ + R H R + G C G+ R++HS RCR S PRG+
Sbjct: 334 RAAEGARHWSRTPHPSGRQRAHGDGCQGRSRTRHSSRC-SCRCRSRRTRSPSSLTPRGQD 392
Query: 267 GQRGLXGA 244
G GA
Sbjct: 393 GTGDAGGA 400
>08_02_0707 - 20212190-20214592
Length = 800
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = -2
Query: 417 YHVRHHHRGSRAGSCGHRCGGQPRSKHSRIWGEHRCRGH 301
+H HHH + GSC H HS GH
Sbjct: 484 FHEEHHH--AHGGSCSHSHSHSHSHSHSHSHSHSHVHGH 520
>04_04_1591 + 34647817-34648416
Length = 199
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 13 CSVTCSVSLVAKCSPKCS 66
C TC++S KCS KCS
Sbjct: 174 CGKTCTMSAHTKCSAKCS 191
>03_03_0092 - 14374263-14374384,14374485-14374722
Length = 119
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/76 (27%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = -3
Query: 278 VDDGGSVDXQGRRGL-VELHGQWVRHNEQGRNEPRHSVPGHHDGRCDWDETAAAWWYGRR 102
V+ G + R L VE H RH G E + G C W + +
Sbjct: 21 VEADGMEESLARPSLTVEAHSTEQRHRRYGVREVAVHLRPVRRGGCQWWQGGGGGAWVEA 80
Query: 101 PALAASQHGAKDEHFG 54
P+L SQ GA G
Sbjct: 81 PSLVLSQAGAVQTALG 96
>03_02_0942 - 12595108-12595347,12596227-12596362,12596917-12597083
Length = 180
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -2
Query: 375 CGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRW 268
C CGG+PR K + R R + GRW
Sbjct: 93 CTIVCGGEPRKKPYELQQIETARNRQRVSHRRSGRW 128
>03_02_0213 +
6480521-6480644,6482347-6482499,6482582-6482980,
6483158-6483234,6483990-6485312
Length = 691
Score = 27.5 bits (58), Expect = 8.0
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 333 DYAYSVADPHTGDHKSQHESRDGGAVHGSYSLVEPDGSVRK--VDYTADDHHGF-NAVVH 503
+YA S D G KSQ + RD G +P + +K V ++ + H F NAV H
Sbjct: 162 EYASSANDGAEGSWKSQKKKRDKDDDDGELESGDPSSTSKKPRVVWSVELHQQFVNAVNH 221
>02_05_0267 -
27284781-27284957,27285082-27285126,27285858-27285923,
27286043-27286114,27286225-27286350,27286563-27287217,
27287313-27287521
Length = 449
Score = 27.5 bits (58), Expect = 8.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 417 YHVRHHHRGSRAGSCGHR 364
+H HHH+ ++ GSC H+
Sbjct: 169 HHHHHHHQLTKEGSCNHQ 186
>02_04_0607 - 24302582-24303075,24303150-24304197
Length = 513
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -2
Query: 468 RCSLLYVRNHQARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSKHSRI 328
R L + + H G VRHHHRG AG+ G + G + H R+
Sbjct: 72 RAGLRFQQLHHHHHGH-VDVRHHHRGG-AGAGGAQQGPFQWADHPRL 116
>02_01_0726 +
5440341-5440661,5441574-5441620,5442917-5442977,
5442978-5443035,5443303-5443463,5443692-5443808,
5443888-5443989,5444834-5444908,5444996-5445084,
5445171-5445220,5445562-5445641,5445744-5445953,
5446103-5446170,5446363-5446423,5446719-5447081
Length = 620
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 450 VRNHQARRGSSYHVRHHHRGSRAGS 376
V +H G +H HHH GS A +
Sbjct: 564 VDHHHHHHGHHHHGHHHHEGSSAAA 588
>01_03_0155 +
13274537-13274741,13274827-13274864,13274909-13274968,
13275117-13275176,13277072-13277146,13277233-13277346
Length = 183
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 429 RGSSYHVRHHHRGSRAGSCG 370
+GSS+H HHH G G G
Sbjct: 30 QGSSHHHHHHHSGGGGGGGG 49
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,711,500
Number of Sequences: 37544
Number of extensions: 423595
Number of successful extensions: 1822
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1817
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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