Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_B13
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    24   0.93 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       24   1.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.1  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    23   2.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   6.6  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = -2

Query: 351 PRSKHSRIWGEHRCRGHGRSQEKPRGRWGQRGLXGAAW 238
           PR K+      H    + R   K   RW Q+G  G +W
Sbjct: 145 PRGKNLGGTTLHHGMAYHRGHRKDYERWVQQGAFGWSW 182


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 324 GEHRCRGHGRSQEKPRGRWGQRGLXG 247
           G  + RGHG+     RGR G RG  G
Sbjct: 79  GRGKGRGHGKGGS--RGRGGNRGRTG 102


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 72   SAVLACR-QRWSPAIPPRCGSFVPVASSVMMPRHTMPRLITPLL 200
            S VL+ R Q  +P IPP      P ++++++  H  P    P+L
Sbjct: 1487 SPVLSVRTQGQAPGIPPAATFLSPNSTTLVLRLHVWPDNGCPIL 1530


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 72   SAVLACR-QRWSPAIPPRCGSFVPVASSVMMPRHTMPRLITPLL 200
            S VL+ R Q  +P IPP      P ++++++  H  P    P+L
Sbjct: 1483 SPVLSVRTQGQAPGIPPAATFLSPNSTTLVLRLHVWPDNGCPIL 1526


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 366 RCGGQPRSKHSRIWGEHRCRGHGRSQEK 283
           R G  P+ + +RI    +   H RSQEK
Sbjct: 139 RFGRVPKREKARILAAMQQSSHSRSQEK 166


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 414 GSYSLVEPDGSVRKVDYTADDHHGF 488
           GS S   PDG    + Y AD+ +GF
Sbjct: 73  GSDSYTAPDGQQVSITYVADE-NGF 96


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 61  CSSLAPCWLAANAGLLPY 114
           C+S   C  A + GL PY
Sbjct: 440 CNSKTKCCFAQDDGLCPY 457


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,185
Number of Sequences: 438
Number of extensions: 3673
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)