Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_B11
(847 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1257 - 35778078-35778299,35778952-35779069,35779294-357794... 35 0.094
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564... 34 0.12
04_04_0348 + 24568834-24568904,24569019-24569148,24569310-245694... 33 0.22
04_03_0501 + 16593710-16593886,16595255-16595311,16595748-165974... 33 0.22
04_04_1030 - 30249160-30250403,30250787-30251666 33 0.38
10_08_0352 + 17091637-17091945,17092049-17096617,17096975-170971... 30 2.7
08_01_1029 - 10419090-10419476,10419721-10419822,10420367-104204... 30 2.7
03_02_0943 + 12598616-12598789,12599790-12601250 30 2.7
03_02_0693 - 10441253-10441294,10441404-10441511,10441594-104416... 30 2.7
03_06_0693 - 35592547-35592651,35592771-35592869,35593024-355930... 29 3.5
03_06_0579 + 34870958-34874578 29 3.5
02_02_0520 + 11152718-11153600,11153736-11153917,11154160-111542... 29 3.5
02_02_0140 + 7125914-7126264,7126426-7126677,7126766-7126861,712... 29 3.5
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 29 4.7
05_05_0145 - 22690212-22690472,22690701-22690818,22691125-226912... 29 6.2
03_06_0347 + 33293915-33294104,33295143-33295284,33295365-332954... 29 6.2
09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851... 28 8.1
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 28 8.1
01_06_1479 + 37657525-37657878,37658075-37658254,37658703-376588... 28 8.1
>01_06_1257 -
35778078-35778299,35778952-35779069,35779294-35779433,
35779763-35779864,35779971-35780051,35780333-35780402,
35781053-35781114,35781789-35782183,35782303-35782386,
35782949-35783041,35783144-35783195,35783310-35783376,
35783492-35783550,35784209-35784256,35784927-35785040,
35785162-35785335,35785417-35785944,35786025-35786094,
35786668-35786711
Length = 840
Score = 34.7 bits (76), Expect = 0.094
Identities = 20/64 (31%), Positives = 36/64 (56%)
Frame = +2
Query: 503 RLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSASMKKAADPHDE 682
+L+ E+ +LR+ L DKQE A + + +EQ+ V+ D+ + ++A+ K AA E
Sbjct: 623 QLEQELSDLRQALLDKQEQEQAMLQVLMRVEQEQKVTEDARIFAEQDAAAQKYAAHVLQE 682
Query: 683 TTEK 694
E+
Sbjct: 683 KYEE 686
>04_03_0998 -
21555696-21556080,21556177-21556254,21556333-21556424,
21556524-21556620,21557113-21557141,21557620-21557781,
21557981-21558061,21558156-21558314,21558394-21558510,
21558598-21558666,21558753-21558831,21560884-21561050,
21561109-21561229,21561522-21561649,21562293-21562361,
21562408-21562539,21562619-21562991,21563274-21563398,
21563500-21563655,21563785-21564198,21564634-21564691,
21566522-21566648,21568047-21568305,21569005-21569104,
21569231-21569317,21569454-21569692,21569914-21569999,
21570409-21570532,21571111-21574332
Length = 2444
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 602 GSVSTDSMEVSMNNSASMKKAADPHDETTEKRDAVDDTCAESESAGDYLXVTVNN 766
G T ++ S NN KKAA+ D+ ++K+ V+D + G Y+ T N
Sbjct: 747 GPKQTSKLDSSKNNRKRSKKAANIEDKGSQKKQKVNDVPVSYCAIGQYMDHTTEN 801
>04_04_0348 + 24568834-24568904,24569019-24569148,24569310-24569459,
24569546-24569650,24569808-24570029,24570162-24570274,
24570371-24570470,24571125-24571325,24571401-24571549,
24571624-24571765,24571851-24571991,24572098-24572286,
24572622-24572835,24573198-24573291,24573671-24573905,
24574242-24574433,24574919-24575017,24575443-24575532,
24575709-24575912,24575994-24576269,24576974-24577096,
24577453-24577608,24577686-24577802,24577878-24577957,
24578173-24578377,24578485-24578687,24578882-24578933
Length = 1350
Score = 33.5 bits (73), Expect = 0.22
Identities = 32/111 (28%), Positives = 52/111 (46%)
Frame = +2
Query: 326 STEGHDVTNISGISMKQYEEQLNGLRKENFHLKLRIYFLEEKLGNGSPPAVQGLLEHNVR 505
S E NISGIS+KQ +E +N +K + + + L EK S V+G +E V
Sbjct: 1021 SFEESIAANISGISVKQLQEIINAAKKISTPI-ITAELLSEK-DVLSARIVKGSMEKAVL 1078
Query: 506 LQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSASMK 658
+V E ++ L Q L + + +S DS+++S+ N +K
Sbjct: 1079 GEV-AEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIK 1128
>04_03_0501 + 16593710-16593886,16595255-16595311,16595748-16597469,
16599045-16599326,16599521-16599637,16599655-16600365
Length = 1021
Score = 33.5 bits (73), Expect = 0.22
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +2
Query: 485 LLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSASMKKA 664
LL R+Q ++EE +RQL ++E+ A Q+ + + ME A +K
Sbjct: 842 LLTSYKRIQEQLEEHKRQLMIQEEMEA----------QKRAQEEEEMEAQKRTQAEEEKE 891
Query: 665 ADPHDETTEKRD-AVDDTCAESESAG-DYLXVTVNNEDLDELM 787
A +E K D A D+ A S+ D + V +N D DE +
Sbjct: 892 AAKAEEEARKMDRAADEEAAGSKQVNEDQMDVDNSNADGDEFV 934
>04_04_1030 - 30249160-30250403,30250787-30251666
Length = 707
Score = 32.7 bits (71), Expect = 0.38
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 500 VRLQVEVEELRRQLTDKQELLAAAAEAI-DVLEQQGSVSTDSMEVSMNNSASMKKAADPH 676
V + +E+E LRR + KQ L + +A+ +++EQQ + M++ + + +K ++
Sbjct: 624 VEVAIELEALRRLM--KQHLSLKSEKALRELMEQQSAEDCQEMQL-LQEESGQEKMSNIE 680
Query: 677 DETTEKRDAVDDTCAES 727
RD+ D C ES
Sbjct: 681 PLKLYHRDSASDKCMES 697
>10_08_0352 + 17091637-17091945,17092049-17096617,17096975-17097187,
17097266-17097494,17097857-17097981
Length = 1814
Score = 29.9 bits (64), Expect = 2.7
Identities = 34/186 (18%), Positives = 74/186 (39%), Gaps = 7/186 (3%)
Frame = +2
Query: 236 LPRTHSSKHASSIPS-----PFSTSPRKLQEMAMPSTEGHDVTNISGISMKQYEEQLNGL 400
+ R H S + S S P + P K + +T+ H N S S+ + ++ +
Sbjct: 1254 IERVHDSANKMSTTSVEKSIPETVKPMKATKNNSKATDYHGTENKSPDSLACSRQTISQI 1313
Query: 401 RKENFHLKLRIYFLEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAEA 580
K+ + ++ + S + L + ++ +++ K +A A
Sbjct: 1314 EKD-------VSDADKAANHPSSAITENRLHKANEIDASATAIKTEVSKK----SAGANI 1362
Query: 581 IDVLEQQGSVSTDSMEVSMNNSASMKKAADPH--DETTEKRDAVDDTCAESESAGDYLXV 754
+ L S + + + + + +S+ DPH D + ++ D C ++ES+ L
Sbjct: 1363 CNTLNPADSQTVHATDTAQDLPSSLLHD-DPHLPDVGSSTSTSISDNCIQTESSNTSLSA 1421
Query: 755 TVNNED 772
+NNE+
Sbjct: 1422 NLNNEE 1427
>08_01_1029 -
10419090-10419476,10419721-10419822,10420367-10420459,
10420542-10420754,10421625-10421654
Length = 274
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 497 NVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGS 607
+ R+Q+++ +L +QL D++E+ E + L QGS
Sbjct: 217 SARMQLQIADLHKQLEDQKEVARKNEEETEKLRHQGS 253
>03_02_0943 + 12598616-12598789,12599790-12601250
Length = 544
Score = 29.9 bits (64), Expect = 2.7
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Frame = +2
Query: 476 VQGLLEHNVRLQ----VEVEELRRQLTDKQELLAAAAEAIDVLE----QQGSVSTDSMEV 631
++GL EH L +E+E+ + L LAA AI++L ++ + S E
Sbjct: 148 MEGLDEHPQPLSGSVLLELEQAKANLNRTTGDLAAVRAAIELLHNSIAKEKLLLERSREK 207
Query: 632 SMNNSASMKKAADPHDETTEKRDAVDDTCAESESAGD 742
+N+A D D+TT+K + D A E D
Sbjct: 208 LSSNTALASSLEDELDQTTQKLQTLKDLQARREDPSD 244
>03_02_0693 -
10441253-10441294,10441404-10441511,10441594-10441677,
10441765-10443062,10443111-10444804,10444890-10444957,
10445057-10445186,10445292-10445415,10445551-10445711,
10446714-10446868
Length = 1287
Score = 29.9 bits (64), Expect = 2.7
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
Frame = +2
Query: 515 EVEELRRQLTDKQELLAAAAEAIDVLEQQ--GSVSTDSMEVSMNNSASMKKAADPHDETT 688
EV RRQL +Q L + + Q G S D SMN+S D D T
Sbjct: 225 EVPTRRRQLKYRQ-LNGSVFRSFRPQMQNLYGETSPDEKPCSMNHSEVQISFTDSPDTNT 283
Query: 689 EKRDAVDDTCAESESA--GDYLXVTVNNEDLDELMKLXRENRKA 814
E+RD + DT + + +Y+ N +E + + R A
Sbjct: 284 EERDIMVDTFSSMDKGKENNYVMAGKNRLLSEEALSRSSDARSA 327
>03_06_0693 -
35592547-35592651,35592771-35592869,35593024-35593094,
35594457-35595042
Length = 286
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = -3
Query: 800 RVSIS*VRPNPHCSLSPXSNHPQTPIPHTYRRRHPASLLSRHVDRRPFSSKRYCSWT 630
R++++ +RP+P L+P + P+ + RR A L+ DR ++ Y WT
Sbjct: 11 RLAVAPLRPHPRLGLTPTAVGRPLPLAYLGRRAAAARQLAAVADRNVYNGV-YGPWT 66
>03_06_0579 + 34870958-34874578
Length = 1206
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/85 (27%), Positives = 38/85 (44%)
Frame = +2
Query: 521 EELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSASMKKAADPHDETTEKRD 700
+EL + +A + LE+Q TD +E+ N+ + K AD H++ T D
Sbjct: 280 DELEMEGGKSDNGIAELPPVVSALEKQ---DTD-LELR-NDDSGAKDGADNHEDATNFVD 334
Query: 701 AVDDTCAESESAGDYLXVTVNNEDL 775
+ A + A + L V N +DL
Sbjct: 335 SSTGYVATGDGASELLEVPANVDDL 359
>02_02_0520 +
11152718-11153600,11153736-11153917,11154160-11154249,
11154343-11154627,11154776-11154994,11155112-11155339
Length = 628
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +2
Query: 491 EHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSA 649
EH+ ++ E ++LR+QL DK+ + ++ + Q + +E M ++
Sbjct: 305 EHSQKIFEETDQLRKQLDDKENAIERRSKQLSKFVAQTDIERRKLESEMKKNS 357
>02_02_0140 +
7125914-7126264,7126426-7126677,7126766-7126861,
7127013-7127187,7127283-7127363,7127451-7127548,
7127828-7127920,7128607-7128678,7128998-7129117,
7129210-7129260,7130026-7130211,7130355-7130411
Length = 543
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = -3
Query: 770 PHCSLSPXSNHPQTPIPHTYRRRHPASLLSRHVDRRP 660
PH SL+ S H + P RRR P LL R RRP
Sbjct: 57 PHSSLAAASRHYASSTPGR-RRRAPPMLLRRRRARRP 92
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 29.1 bits (62), Expect = 4.7
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Frame = +2
Query: 287 STSPRKLQEMAMPSTEGHDVTNISGISM--KQYEEQLNGLRKENFHLKLRIYFLEEKLG- 457
S +K E + S E N + IS+ + YE++L L ++ K + F E++
Sbjct: 211 SQQEKKALESVVSSMESKLAENEAAISLMRENYEKRL--LDQQTAQKKQAMKFQEQEASL 268
Query: 458 ----NGSPPAVQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLE 595
+ + V L E R + EELR ++ + LA A + DVLE
Sbjct: 269 LDQLSSTKKTVTSLSEEFRREKTLAEELREEIRRLESSLAQAGDDKDVLE 318
>05_05_0145 -
22690212-22690472,22690701-22690818,22691125-22691261,
22691743-22691844,22691921-22692001,22692325-22692394,
22692628-22692689,22692908-22693320,22693424-22693507,
22694180-22694272,22694376-22694427,22694542-22694608,
22694714-22694772,22694920-22695033,22695174-22695347,
22695444-22695935,22696021-22696090,22696649-22696692
Length = 830
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +2
Query: 515 EVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSASMKKAADPHDETTEK 694
E+ ELR+ L DKQE A + + +EQ+ ++ ++ + ++A+ + A + E E+
Sbjct: 605 ELSELRQTLLDKQEQEQAMCQVLLRVEQELKIAEEARISAEQDAAAQRYAVNVLQEKYEE 664
>03_06_0347 +
33293915-33294104,33295143-33295284,33295365-33295485,
33295590-33295652,33296524-33296553,33297411-33297905
Length = 346
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 476 VQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSASM 655
V+G++ N+ ++ E L DK E L + A+ QG+ E+ M+ S+
Sbjct: 141 VKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQAGTQGTRRQTLGEILMDPDGSV 200
Query: 656 KKAADPH 676
A+PH
Sbjct: 201 AARANPH 207
>09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,
8511209-8511523,8511576-8511682,8512559-8512629,
8512952-8513029,8513390-8513454,8514224-8514274,
8514373-8514414,8514785-8515105,8515154-8517880
Length = 1480
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 213 SFEEKWPHYLERTVLNMLRVYHHRLVQ 293
SF+ KW YL V N LR + LVQ
Sbjct: 1032 SFQSKWRTYLRSCVRNNLRTFFQVLVQ 1058
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Frame = +2
Query: 392 NGLRKENFHLKLRIYFLEEKLGNGSPP--AVQGLLEHNVRLQVEVEELRRQ-----LTDK 550
NG +++H++ EE LGNG +V +E N+ E+++L+ + D+
Sbjct: 1812 NGKSLQDYHVESN----EENLGNGIGDVISVHEKIEDNIHESAELKDLQDNSLVYFIQDE 1867
Query: 551 QELLAAAAE--AIDVLEQQGSVSTDSMEVSMNNSASMKKAADPH 676
L + A + E +ST+ E + NN+ +K+ + H
Sbjct: 1868 TSELGEKTQISANRIEENDDHISTEDTEETSNNTNLVKEGPNEH 1911
>01_06_1479 +
37657525-37657878,37658075-37658254,37658703-37658831,
37658936-37659084,37659245-37659383,37659969-37660274
Length = 418
Score = 28.3 bits (60), Expect = 8.1
Identities = 34/140 (24%), Positives = 65/140 (46%)
Frame = +2
Query: 371 KQYEEQLNGLRKENFHLKLRIYFLEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQLTDK 550
K E Q L KE + + L K+ + V+ L V L V+++R +L
Sbjct: 173 KDLESQTRSLEKEAYPALDK---LGSKVSTLNLDHVRNLKSRMVDLSGRVQKIRDEL--- 226
Query: 551 QELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSASMKKAADPHDETTEKRDAVDDTCAESE 730
+ LL + ++ + +S + S++ + S K A+ HD+ E+ D D+T + E
Sbjct: 227 EHLLDDDMDMSEMYLTR-KLSFQGLSGSLSRADSHKYASVDHDDDREEEDHDDETESGRE 285
Query: 731 SAGDYLXVTVNNEDLDELMK 790
S+ + V + E+L+ L++
Sbjct: 286 SS---VYVKPDIEELEMLLE 302
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,255,874
Number of Sequences: 37544
Number of extensions: 407754
Number of successful extensions: 1433
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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