Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_B10
(812 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 29 0.044
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 29 0.044
AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory recept... 24 1.3
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 24 1.7
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 24 1.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 24 1.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 24 1.7
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 23 2.9
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 21 8.8
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 29.1 bits (62), Expect = 0.044
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 498 IRETSQTKVLKQLLMLNSLE*VFVLFLVYNMFL*AYVILFYKF 626
I ETS+ + K+ L L + VFV F + + +LF++F
Sbjct: 1308 IEETSEVHISKEYLQLEPIGLVFVFFFALILVIQFVAMLFHRF 1350
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = +3
Query: 195 NFDDDEKQKLIEEVH--AVVTVRDAK 266
NF DDE L E ++ + TV++ K
Sbjct: 15 NFSDDESSPLTENIYGGSTRTVQETK 40
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 29.1 bits (62), Expect = 0.044
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 498 IRETSQTKVLKQLLMLNSLE*VFVLFLVYNMFL*AYVILFYKF 626
I ETS+ + K+ L L + VFV F + + +LF++F
Sbjct: 1308 IEETSEVHISKEYLQLEPIGLVFVFFFALILVIQFVAMLFHRF 1350
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = +3
Query: 195 NFDDDEKQKLIEEVH--AVVTVRDAK 266
NF DDE L E ++ + TV++ K
Sbjct: 15 NFSDDESSPLTENIYGGSTRTVQETK 40
>AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory receptor
candidate 35 protein.
Length = 251
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 275 VRVFRVSDGDDCMNFFYQLLFFVIIKI 195
V+ + VSD ++ + FF L VI+K+
Sbjct: 38 VKTYLVSDFENYVTFFCSLFIVVILKL 64
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 352 MITICVISRPYITLSRS*MNISIMFASWT 438
++ I + ++ LS S N+ FASWT
Sbjct: 4 LLAILAFASAFMVLSASAGNVVCYFASWT 32
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 352 MITICVISRPYITLSRS*MNISIMFASWT 438
++ I + ++ LS S N+ FASWT
Sbjct: 4 LLAILAFASAFMVLSASAGNVVCYFASWT 32
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 507 TSQTKVLKQLLMLNSLE*VFVLFLVYNMFL*AYVILFYKF 626
T + + K+ L L + VFV F + + +LF++F
Sbjct: 1311 TQEVHISKEYLQLEPIGLVFVFFFALILVIQFVAMLFHRF 1350
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = +3
Query: 195 NFDDDEKQKLIEEVH--AVVTVRDAK 266
NF DDE L E ++ + TV++ K
Sbjct: 15 NFSDDESSPLTENIYGGSTRTVQETK 40
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 507 TSQTKVLKQLLMLNSLE*VFVLFLVYNMFL*AYVILFYKF 626
T + + K+ L L + VFV F + + +LF++F
Sbjct: 1311 TQEVHISKEYLQLEPIGLVFVFFFALILVIQFVAMLFHRF 1350
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = +3
Query: 195 NFDDDEKQKLIEEVH--AVVTVRDAK 266
NF DDE L E ++ + TV++ K
Sbjct: 15 NFSDDESSPLTENIYGGSTRTVQETK 40
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 23.0 bits (47), Expect = 2.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 239 MNFFYQLLFFVIIKIHIPFRKSSLACSVLDQNESYH 132
++FFYQLL ++I + I R L +LD H
Sbjct: 159 IHFFYQLLLYLITDM-ILMRYKELNRVILDNMSRNH 193
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 260 VSDGDDCMNFFYQLLF 213
V D DDC F+Y L +
Sbjct: 428 VRDPDDCSIFYYCLAY 443
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,786
Number of Sequences: 336
Number of extensions: 4264
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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