Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_B10
(812 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0662 + 5601147-5601176,5601419-5601517,5601601-5601651,560... 191 6e-49
03_06_0198 - 32299480-32299643,32300084-32300126,32300843-323009... 159 2e-39
10_06_0127 - 11027692-11027826,11027925-11027993,11029925-110300... 120 2e-27
03_02_0244 + 6750973-6751041,6751216-6751258,6751349-6751410,675... 79 3e-15
01_03_0243 + 14154122-14154190,14154373-14154415,14154491-141545... 74 1e-13
08_02_0565 + 18751383-18751676,18751739-18751825,18752593-18752895 64 1e-10
03_06_0413 + 33756151-33756475,33756837-33756945,33757004-337570... 52 5e-07
01_06_1282 + 35972234-35972244,35972451-35972522,35972714-359727... 36 0.038
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 34 0.12
05_03_0442 + 14040280-14040371,14040449-14040517,14041217-140413... 34 0.15
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 32 0.62
08_02_0189 + 13984892-13984943,13985929-13986480,13986577-139867... 31 1.1
11_03_0175 + 11241151-11241157,11241253-11241425,11241619-112417... 31 1.4
06_03_0992 - 26680555-26680840,26680893-26681279,26681364-266824... 31 1.4
05_05_0116 - 22496535-22496576,22496974-22497058,22497468-224975... 30 1.9
08_02_1195 - 25149891-25151402,25152194-25152493 30 2.5
03_05_0871 + 28396964-28399843 29 3.3
11_06_0370 + 22768977-22769523,22769619-22770642,22770784-227711... 28 7.7
>12_01_0662 +
5601147-5601176,5601419-5601517,5601601-5601651,
5602822-5602995,5603869-5603928,5604759-5604800
Length = 151
Score = 191 bits (465), Expect = 6e-49
Identities = 85/143 (59%), Positives = 111/143 (77%)
Frame = +3
Query: 129 KMIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVY 308
+ IRFIL+QNR GKTRLAK+Y+ +D EK K+ EVH +V RD K TNFVEFR K++Y
Sbjct: 9 QQIRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIY 68
Query: 309 RRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFL 488
RRYAGL+F +CVD+ DN L YLE IH FVE+L+ +F NVCELDLVFNF+KVY ++DE L
Sbjct: 69 RRYAGLFFSMCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFIL 128
Query: 489 AGEIRETSQTKVLKQLLMLNSLE 557
AGE++ETS+ +++++ L LE
Sbjct: 129 AGELQETSKRAIIERMGELEKLE 151
>03_06_0198 -
32299480-32299643,32300084-32300126,32300843-32300929,
32301063-32301098,32301187-32301295,32301408-32301499,
32302029-32302115,32303887-32304222
Length = 317
Score = 159 bits (386), Expect = 2e-39
Identities = 67/132 (50%), Positives = 96/132 (72%)
Frame = +3
Query: 135 IRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRR 314
I F+L+ +R GK RL KWY + E+ K+I E+ ++ R K NFVE++ +K+VYRR
Sbjct: 113 INFVLLISRQGKVRLTKWYSPYTQKERTKVIRELSGLILTRGPKLCNFVEWKGYKVVYRR 172
Query: 315 YAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAG 494
YA LYFC+C+D DN L LE IH+FVEVL+ YF +VCELDL+FNF+K Y ++DE+ +AG
Sbjct: 173 YASLYFCMCIDAEDNELEVLEIIHHFVEVLDRYFGSVCELDLIFNFHKAYYILDEILIAG 232
Query: 495 EIRETSQTKVLK 530
E++E+S+ V +
Sbjct: 233 ELQESSKKNVAR 244
>10_06_0127 -
11027692-11027826,11027925-11027993,11029925-11030011,
11030146-11030286
Length = 143
Score = 120 bits (288), Expect = 2e-27
Identities = 56/137 (40%), Positives = 91/137 (66%)
Frame = +3
Query: 135 IRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRR 314
IRF+++ N+ G+TR+A++Y + DE++ L E+ R +FVE RN+K+VYRR
Sbjct: 3 IRFVVMVNKQGQTRVAQYYEHLSVDERRALEGEIVRKCLARTDHQCSFVEHRNYKVVYRR 62
Query: 315 YAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAG 494
YA L+F + VD ++N L LE IH VE ++ +F NVCELD++F+ KV+ +++EM + G
Sbjct: 63 YASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNG 122
Query: 495 EIRETSQTKVLKQLLML 545
I ETS+ +L + ++
Sbjct: 123 CIVETSKQNILAPIHLM 139
>03_02_0244 +
6750973-6751041,6751216-6751258,6751349-6751410,
6751779-6751875,6752380-6752450,6752503-6752586,
6753040-6753294
Length = 226
Score = 79.4 bits (187), Expect = 3e-15
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Frame = +3
Query: 132 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNF----- 296
MI+ +++ + GK RL K+Y ++ Q L+ V +++ R +NFV+
Sbjct: 1 MIQAVMVMSTQGKPRLLKFYSYQPPEKHQDLVRGVFQLLSARPDSVSNFVKVDAIFGPGA 60
Query: 297 KIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYK 458
K+VY+ A LYF D ++N L L+ + FVE L+ F NVCELD+VFNF K
Sbjct: 61 KLVYKHLATLYFVFVFDSSENELAVLDLVQVFVETLDRCFKNVCELDIVFNFNK 114
>01_03_0243 +
14154122-14154190,14154373-14154415,14154491-14154552,
14155214-14155310,14157663-14157733,14158338-14158694
Length = 232
Score = 74.1 bits (174), Expect = 1e-13
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
Frame = +3
Query: 132 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNF----- 296
MI+ +++ + GK RL K+Y ++ Q+L+ V +++ R +NFV+
Sbjct: 1 MIQAVMVMSTQGKPRLLKFYSYHAPEKHQELVRAVFQLLSARPDSVSNFVKVDAIFGPGA 60
Query: 297 KIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYK 458
K++Y+ A LY D ++N L L+ + FVE L+ F NVCEL +VFNF K
Sbjct: 61 KLIYKHLATLYLGFVFDGSENELAVLDLVQVFVETLDRCFKNVCELHIVFNFNK 114
>08_02_0565 + 18751383-18751676,18751739-18751825,18752593-18752895
Length = 227
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = +3
Query: 273 NFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNV 425
+FVE RN+K+VYRRYA L+F + VD ++N L LE IH FVE ++ +F NV
Sbjct: 100 SFVEHRNYKVVYRRYASLFFLVGVDNDENELAILEFIHLFVETMDRHFGNV 150
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +3
Query: 366 CYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLML 545
C I++ + Y CELD++F+ KV+ +++EM + G I ETS+ +L + ++
Sbjct: 164 CKYAHIYHMGQADGNYPFGQCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPIQLM 223
Score = 35.5 bits (78), Expect = 0.051
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 135 IRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEV 236
IRF+L N+ G+TRLA++Y + DE++ L E+
Sbjct: 3 IRFVLFVNKQGQTRLAQYYEHLSIDERRALEGEI 36
>03_06_0413 +
33756151-33756475,33756837-33756945,33757004-33757058,
33757059-33757094,33757196-33757282,33757737-33757808
Length = 227
Score = 52.0 bits (119), Expect = 5e-07
Identities = 20/44 (45%), Positives = 35/44 (79%)
Frame = +3
Query: 423 VCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLNSL 554
VCELDL+FNF+K Y ++DE+ +AGE++E+++ VL+ + ++L
Sbjct: 164 VCELDLIFNFHKAYFILDEVLIAGELQESNKKAVLRLITTQDNL 207
>01_06_1282 +
35972234-35972244,35972451-35972522,35972714-35972747,
35973247-35973360,35974833-35975036,35975290-35975449,
35976093-35976240,35976345-35976422,35976854-35976938,
35977142-35977213
Length = 325
Score = 35.9 bits (79), Expect = 0.038
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Frame = +3
Query: 135 IRFILIQNRAGKTRLAKWYMNFDD----DEKQKLIEEVHAVVTVRDAK-HTNFVEFRNFK 299
++ IL+ + GK K+Y DD KQ + V A A+ V F ++
Sbjct: 151 VKNILVLDSEGKRVAVKYYS--DDWPSLSSKQAFEKSVFAKTQKTSARTEAEIVMFDSYF 208
Query: 300 IVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHN-VCELDLVFNFYKVYTVVD 476
+VY+ L+F + +N L + F E ++ N V + N ++ +D
Sbjct: 209 VVYKFIQDLHFFVTGGDEENELILASVLQGFSEAIDYLLRNKVHRRAALENLDLIFLCLD 268
Query: 477 EMFLAGEIRETSQTKVLKQL 536
E+ G + ET +L+++
Sbjct: 269 EVVDGGIVLETDAKAILEKV 288
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 351 NDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLK 530
N N L +H V+V YF + E L NF VY ++DEM G + T + K+L
Sbjct: 78 NCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYT-EAKILS 136
Query: 531 QLL 539
+ +
Sbjct: 137 EFI 139
>05_03_0442 +
14040280-14040371,14040449-14040517,14041217-14041329,
14043110-14043209,14044508-14044682,14044768-14044881,
14045157-14045287,14048401-14048464,14048585-14048624,
14049002-14049225,14049634-14049876,14050145-14050313,
14050569-14050873,14051325-14051511,14051622-14051775,
14052145-14052207,14052300-14052396,14052500-14052589
Length = 809
Score = 33.9 bits (74), Expect = 0.15
Identities = 28/136 (20%), Positives = 60/136 (44%)
Frame = +3
Query: 150 IQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLY 329
I +++GK +++ +++ + L+ +V K +VE N + VY+ GLY
Sbjct: 293 IISKSGKALVSRQFVDMSRIRIEGLLAAFPKLVGT--GKQHTYVETENVRYVYQPIEGLY 350
Query: 330 FCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRET 509
+ + N L L+ + +++ EY ++ E + +++ DE G +E
Sbjct: 351 LLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFELIFAFDEAISLGN-KEN 409
Query: 510 SQTKVLKQLLMLNSLE 557
+ +KQ + S E
Sbjct: 410 VTVQQVKQYCEMESHE 425
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 351 NDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEM 482
N N L +H V+V YF + E L NF VY ++DEM
Sbjct: 79 NCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 122
>08_02_0189 +
13984892-13984943,13985929-13986480,13986577-13986759,
13986826-13987006,13987238-13987654,13987742-13988128,
13988176-13988467
Length = 687
Score = 31.1 bits (67), Expect = 1.1
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Frame = -1
Query: 446 EDQVQLANIMEIFI*DL--DKVMYGLEITQIVIIYIDTYTEVQTCIPPVYYLEISELDKV 273
++QVQ ++ E + DL DKV Y ++ + + I + C+ +Y + S +DKV
Sbjct: 356 DNQVQAQHVKEKILNDLWWDKVKYIIDFCEPIYSMIRAADTDKPCLHLIYEMWDSMIDKV 415
Query: 272 R--VFR--VSDGDDCMNFFYQLLFFVIIKIHIPFRKSS--LACSVLDQNESYHFHV*LWL 111
+ ++R + D+ +FF F V +H + KS+ L C N Y++ WL
Sbjct: 416 KKIIYRHEGKELDEQCSFF----FHVNEILHFRWAKSTTPLHCLAHSLNPKYYYET--WL 469
>11_03_0175 +
11241151-11241157,11241253-11241425,11241619-11241702,
11242895-11242936,11243407-11243517,11245384-11245575,
11245776-11245859,11246162-11246259,11246670-11246859
Length = 326
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -2
Query: 175 RVLPARFWIKMNLIIFTFSY--GFFIKYYFQRRVDASF 68
R L R+W+K N+ I FSY +F +YF + AS+
Sbjct: 93 RSLKDRYWVKANIWIIIFSYVGNYFWTHYFFTVLGASY 130
>06_03_0992 -
26680555-26680840,26680893-26681279,26681364-26682441,
26682537-26683083
Length = 765
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Frame = -1
Query: 446 EDQVQLANIMEIFI*DL--DKVMYGLEITQIVIIYIDTYTEVQTCIPPVYYLEISELDKV 273
++QVQ + E + D+ DKV Y L+ T + I + C+ VY + S +DKV
Sbjct: 436 DNQVQAQQVKEKVLNDVWWDKVQYILDFTDPIYFMIRAADTDKPCLHLVYEMWDSMIDKV 495
Query: 272 R--VFR--VSDGDDCMNFFYQL 219
+ V+R + D+ +FF+ +
Sbjct: 496 KKIVYRHEGKELDEHSSFFFHV 517
>05_05_0116 -
22496535-22496576,22496974-22497058,22497468-22497545,
22497656-22497803,22498612-22498771,22499056-22499058
Length = 171
Score = 30.3 bits (65), Expect = 1.9
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Frame = +3
Query: 135 IRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAK---HTNFVEFRNFKIV 305
++ IL+ + GK K+Y + KL E V + A V F +V
Sbjct: 7 VKNILLLDSEGKRVAVKYYTDDWPTLSAKLAFEKSVFVKTQKATAGAEAEIVMFDGHIVV 66
Query: 306 YRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYF-HNVCELDLVFNFYKVYTVVDEM 482
Y+ L+F + +N L + F + ++ +NV + + N + +DE+
Sbjct: 67 YKFIQDLHFFVTGGEEENELILASVLQGFTDAVDIILRNNVDKRTALENLDLILLCLDEI 126
Query: 483 FLAGEIRETSQTKVLKQL 536
G + ET + + +++
Sbjct: 127 VDGGIVLETEGSVIAEKV 144
>08_02_1195 - 25149891-25151402,25152194-25152493
Length = 603
Score = 29.9 bits (64), Expect = 2.5
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +1
Query: 412 ISIMFASWTWSSIFIKCIRL*TKCFWLV 495
+S++ SW W+ ++C + +KC WL+
Sbjct: 509 VSMLNWSWPWAEQLLQCFFVASKCIWLL 536
>03_05_0871 + 28396964-28399843
Length = 959
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 329 VQTCIPPVYYLEISELDKVRVFRVSDG 249
+Q P + YL+IS L K+RVF V +G
Sbjct: 876 LQNSFPELRYLKISGLKKLRVFHVGNG 902
>11_06_0370 +
22768977-22769523,22769619-22770642,22770784-22771170,
22771216-22771507
Length = 749
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Frame = -1
Query: 446 EDQVQLANIMEIFI*DL--DKVMYGLEITQIVIIYIDTYTEVQTCIPPVYYLEISELDKV 273
++QVQ ++ E + DL DKV Y ++ + + I + C+ +Y + S +DKV
Sbjct: 436 DNQVQAQHVKEKILNDLWWDKVKYIIDFCEPIYSMIRAADTDKPCLHLIYEMWDSMIDKV 495
Query: 272 R--VFR--VSDGDDCMNFFYQL 219
+ ++R + D+ +FF+ +
Sbjct: 496 KKIIYRHEGKELDEQCSFFFHV 517
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,093,599
Number of Sequences: 37544
Number of extensions: 342769
Number of successful extensions: 711
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -