Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_B09
         (927 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   2.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   4.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   4.5  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 903 PYFFTDTFQNGFERNGGVRAKYLYVQSE 820
           PY + DTF  G++    V  K  Y + +
Sbjct: 315 PYMYEDTFWIGYDNEQSVTIKTEYAKEK 342


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 839 IYMFNPRSFLSK 804
           IY+FNPR +L K
Sbjct: 231 IYVFNPRYYLEK 242


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 839 IYMFNPRSFLSK 804
           IY+FNPR +L K
Sbjct: 231 IYVFNPRYYLEK 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,064
Number of Sequences: 336
Number of extensions: 3654
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25961683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)