Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_B09
(927 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 3e-20
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 5e-20
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 7e-20
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 7e-15
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 7e-11
SB_18389| Best HMM Match : Ferritin (HMM E-Value=2.8e-26) 58 1e-08
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 9e-07
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 46 3e-05
SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021) 42 5e-04
SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3) 35 0.081
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 33 0.43
SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40) 31 1.0
SB_30241| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10) 31 1.0
SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 1.0
SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_41870| Best HMM Match : DUF963 (HMM E-Value=0.22) 31 1.3
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 30 2.3
SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1) 30 3.1
SB_39157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 29 4.0
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 29 5.3
SB_44782| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_24255| Best HMM Match : Herpes_PAP (HMM E-Value=2) 29 5.3
SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_29682| Best HMM Match : PKD_channel (HMM E-Value=0.0011) 28 9.3
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 96.3 bits (229), Expect = 3e-20
Identities = 59/161 (36%), Positives = 84/161 (52%)
Frame = +1
Query: 340 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 519
+ KQI E+ AS Y++M +F D V PGF K F +A+ EEREHA KL + L RG
Sbjct: 150 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRG-- 207
Query: 520 TGSVTNLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLS 699
G + L + P W G ++ AL LE V ++ ++ K E D + D+L
Sbjct: 208 -GRIV-LQDIKRPERDDWGCGQDVIQAALDLEKHVNQALHDLHKVAE-KHGDSQMQDWLE 264
Query: 700 GEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDKKLL 822
+L EQ + ++LAG + LK++ LGEF FDK L
Sbjct: 265 SHYLTEQVEAIKELAGHMTNLKRV---GPGLGEFQFDKHTL 302
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 95.5 bits (227), Expect = 5e-20
Identities = 60/161 (37%), Positives = 84/161 (52%)
Frame = +1
Query: 340 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 519
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 135 VNKQINLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRG-- 192
Query: 520 TGSVTNLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLS 699
G + L + P W G A++ AL LE V ++ ++ K E D + D+L
Sbjct: 193 -GRIV-LQDIKRPERDDWGCGQDAIQAALDLEKHVNQALLDLHKVAE-KHGDSQMQDWLE 249
Query: 700 GEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDKKLL 822
+L EQ + ++LAG + LK++ LGEF FDK L
Sbjct: 250 SHYLTEQVEAIKELAGHLTNLKRV---GPGLGEFQFDKLTL 287
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 95.1 bits (226), Expect = 7e-20
Identities = 58/168 (34%), Positives = 88/168 (52%)
Frame = +1
Query: 322 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYL 501
+ C + KQI E+ AS YL+M +F D V PGF K F A+ EEREHA KL+ +
Sbjct: 197 EECEAGINKQINLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQ 256
Query: 502 LMRGKLTGSVTNLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYH 681
RG G + L + P W G +++ AL LE V ++ ++ K E D
Sbjct: 257 NERG---GRIV-LQDIKKPEKDEWGCGMDSIQVALDLEKHVNQALLDLHKIAE-KHGDAQ 311
Query: 682 LVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDKKLLG 825
+ D++ G FL EQ + ++LAG + LK++ LGE+ +D + +G
Sbjct: 312 MTDFIEGNFLTEQVEAIKELAGHLTNLKRV---GPGLGEYQYDHETIG 356
Score = 75.8 bits (178), Expect = 5e-14
Identities = 48/143 (33%), Positives = 75/143 (52%)
Frame = +1
Query: 397 AYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLITYRAPANTSWE 576
A+F D ++ PGFA F AA EE HA +++L RG G V L P W
Sbjct: 2 AHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRG---GRV-KLHHIMKPCRDHWG 57
Query: 577 SGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKAS 756
+G A+ AL LE ++ +++ ++ + +++ D + D+L FL EQ + LA S
Sbjct: 58 NGLMAMRDALYLEKEINHALLDLHQVADTN-RDPQVQDFLESNFLGEQVDSIKTLANYVS 116
Query: 757 TLKKMMDKHAALGEFIFDKKLLG 825
TL+++ LGE+ FDK+ LG
Sbjct: 117 TLQRL---GGGLGEYQFDKETLG 136
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 78.6 bits (185), Expect = 7e-15
Identities = 57/168 (33%), Positives = 79/168 (47%)
Frame = +1
Query: 322 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYL 501
+ C + KQI E+ AS Y +M YF + V+ PGF K F A EEREHA K
Sbjct: 10 EECEAGINKQINLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEEREHAEK----- 64
Query: 502 LMRGKLTGSVTNLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYH 681
P W SG A++ AL LE V ++ E+ KT E + D
Sbjct: 65 -----------------KPERDEWGSGLEAMQTALDLEKHVNQALIELEKTAEKN-GDAQ 106
Query: 682 LVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDKKLLG 825
+ D++ FL EQ + R+L+G + LKK+ LG + FD + LG
Sbjct: 107 MSDFIEDHFLTEQVESIRELSGYIAVLKKV---GPGLGVYQFDHETLG 151
>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 65.3 bits (152), Expect = 7e-11
Identities = 39/96 (40%), Positives = 51/96 (53%)
Frame = +1
Query: 340 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 519
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 18 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFIKASHEEREHAEKLAKFQLQRG-- 75
Query: 520 TGSVTNLITYRAPANTSWESGASALEHALKLESDVT 627
G + L + P W G A++ AL LE+ T
Sbjct: 76 -GRIV-LQDIKRPERDDWGCGQDAIQAALDLENTST 109
>SB_18389| Best HMM Match : Ferritin (HMM E-Value=2.8e-26)
Length = 175
Score = 57.6 bits (133), Expect = 1e-08
Identities = 46/169 (27%), Positives = 86/169 (50%)
Frame = +1
Query: 313 TMEQTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLI 492
++ ++ ++ Q + E AS +YLAM A+ +D A + + EEREH K+
Sbjct: 10 SLHESVEKLLNLQSKIESDASTKYLAMAAW--LDRNGFENTAGYMYKQSEEEREHFLKVF 67
Query: 493 DYLLMRGKLTGSVTNLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFN 672
Y+ G + +VT ++ + S E AL+ E VT+++ +VI C N
Sbjct: 68 KYITEMGGI--AVTPSVS---EVQQEFASFREVFEIALQNEIAVTHAVNKVIAKCRQE-N 121
Query: 673 DYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDKKL 819
DY +++ ++ EQ + +R+ A +A L ++D+ +A G+F DK++
Sbjct: 122 DYATEEFMMW-YVKEQREEERN-ARRALELFDLIDEDSATGKFQLDKEI 168
>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 51.6 bits (118), Expect = 9e-07
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 32/173 (18%)
Frame = +1
Query: 400 YFSIDTVNRPGFAKLFFDAATEEREHA---------TK-----LIDYLLMR--GKLT--G 525
+F D +N PGF K F A+ EE EHA TK I +LL + LT G
Sbjct: 32 HFDRDDINLPGFNKFFKKASKEEWEHAQMVKTAALQTKCYRKLTIVWLLFQFMAYLTKRG 91
Query: 526 SVTNLITYRAPANTSWESGASALEHALKLESDVTNSIR------------EVIKTCES-- 663
L P W +G A+E AL LE ++ +S++ +++ C
Sbjct: 92 GRVKLNDIPTPCRDQWGNGLMAMEDALALEKEILSSLQALHRKAQEENDAQIVTMCAQIP 151
Query: 664 SFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDKKLL 822
+ + D++ FL+EQ + L+ STL+++ + LGE+ FDK+ L
Sbjct: 152 RYPSLQMQDFIEETFLNEQMDSIKQLSNYVSTLRRLGGE--GLGEYQFDKETL 202
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +1
Query: 340 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHA 480
+ KQI +E+ A YL+M +F D +N PGF K F A+ EE EHA
Sbjct: 38 INKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHA 84
>SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021)
Length = 73
Score = 42.3 bits (95), Expect = 5e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +1
Query: 454 AATEEREHATKLIDYLLMRGKLTGSVTNLITYRAPANTSWESGASALEHALKLESDVTNS 633
A+ EEREHA KL + L RG G + L + P W G A++ AL LE V +
Sbjct: 3 ASHEEREHAEKLAKFQLQRG---GRIV-LQDIKRPERDDWGCGQDAIQAALDLEKHVNQA 58
Query: 634 IREVIKTCE 660
+ ++ K E
Sbjct: 59 LHDLHKVAE 67
>SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3)
Length = 249
Score = 35.1 bits (77), Expect = 0.081
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +1
Query: 400 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 543
+F++ +N+PG ++ FDAA+E + T L YLL T S+T ++
Sbjct: 30 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKYLLHGPDCTNSLTGVL 75
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 32.7 bits (71), Expect = 0.43
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 574 ESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLS 699
ES A+ LEH L+ E++ N +R+ T SS N+Y V+YL+
Sbjct: 1823 ESKAADLEHRLETEANDKNKLRQENITLASSLNEYK-VNYLT 1863
>SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 31.5 bits (68), Expect = 1.0
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 400 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 543
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 350 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 395
>SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)
Length = 1740
Score = 31.5 bits (68), Expect = 1.0
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 400 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 543
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 868 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 913
>SB_30241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 31.5 bits (68), Expect = 1.0
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Frame = +3
Query: 582 RISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLLVRGIPRRT---------VQGPA 734
R PR RP + ++ HQ+ R + +R PP RG PR++ QG
Sbjct: 53 RRRPRPRPNSEGKEGEEADHEHQEERPRGRRPPPWWRRRRGPPRKSDSAEHSGADSQGEG 112
Query: 735 RPRRQGLDPQEDDGQARRPRRVHLRQ-ETPRIE 830
+++G +E + + RRPRR R+ PR E
Sbjct: 113 N-KQEGSAEEEREQRPRRPRRPRFRKSRQPRSE 144
>SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10)
Length = 475
Score = 31.5 bits (68), Expect = 1.0
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 400 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 543
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 151 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 196
>SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1244
Score = 31.5 bits (68), Expect = 1.0
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 400 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 543
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 667 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 712
>SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1515
Score = 31.5 bits (68), Expect = 1.0
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 400 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 543
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 945 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 990
>SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 732 ARPRRQGLDPQEDDGQARRPRRVHLR 809
ARPR+ PQ+ D QA RPR+ L+
Sbjct: 40 ARPRQASRKPQDQDKQAARPRQASLK 65
>SB_41870| Best HMM Match : DUF963 (HMM E-Value=0.22)
Length = 233
Score = 31.1 bits (67), Expect = 1.3
Identities = 24/77 (31%), Positives = 32/77 (41%)
Frame = -2
Query: 653 VLMTSRMLLVTSLSSLRACSRADAPLSHDVLAGALYVMRLVTEXXXXXXXXXXXXXXVAC 474
VL TSR +L TS S L A SR+ S VLA + Y++ +
Sbjct: 144 VLATSRSVLATSRSVL-ATSRSVLATSRSVLATSRYILATSRSVLATGRSSFATSRYILA 202
Query: 473 SRSSVAASKNSFAKPGR 423
+ SV A+ S GR
Sbjct: 203 TSRSVLATSRSVLATGR 219
Score = 29.5 bits (63), Expect = 4.0
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -2
Query: 653 VLMTSRMLLVTSLSSLRACSRADAPLSHDVLAGALYVMRLV-TEXXXXXXXXXXXXXXVA 477
VL TSR +L TS S L A SR+ S VLA + Y++ + +A
Sbjct: 81 VLATSRSVLATSRSVL-ATSRSVLATSRSVLATSRYILATSRSVLATGRSSFATSRYILA 139
Query: 476 CSRSSVAASKNSFA 435
SRS +A S++ A
Sbjct: 140 TSRSVLATSRSVLA 153
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 288 RHHQG*VAHHGADLLQHDEETDPGGSG 368
RHHQ AHHG L+HD E D GSG
Sbjct: 811 RHHQH-GAHHG---LKHDTENDASGSG 833
>SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1)
Length = 355
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 744 RQGLDPQEDDGQARRPRRVHLRQETPR 824
R+ PQ+ D QA RPR+ RQ PR
Sbjct: 41 RKTSKPQDQDKQAARPRQARTRQARPR 67
>SB_39157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = +1
Query: 634 IREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTL--KKMMDKHAALGEFIF 807
+R V T E ++D H DY S YKG + L K K L EF F
Sbjct: 6 VRVVSDTVELLWSDGHATDYKSSWLAQHAYKGNKKLRVKEELFLWDKERINSTTLPEFSF 65
Query: 808 D 810
D
Sbjct: 66 D 66
>SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 344
Score = 29.5 bits (63), Expect = 4.0
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Frame = +3
Query: 588 SPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLLVRGIPRRTVQGPARPRRQG----- 752
S + + QAG P H+ Q P + + P+ PARPR+
Sbjct: 251 SHKTKGQAGRKIKISKPQNHKQAPRPRQASPKTK--GQASPKTKSTKPARPRQASPKAKT 308
Query: 753 LDPQEDDGQARRPRRVHLRQETPR 824
PQ+ D Q RPR+ L+ +T +
Sbjct: 309 SKPQDQDKQVARPRQSSLKTKTSK 332
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 29.1 bits (62), Expect = 5.3
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Frame = +3
Query: 513 QADRLRNQPHHVQGPRQHVVGERRISPRA--RPQAGE*RHQQHPGGHQDLREQLQRLPPG 686
+ +L++Q + PRQ + P+ +PQ + Q P + + G
Sbjct: 719 KTSKLQDQDNQAARPRQASRKTKTSKPQDQDKPQDKQVARQARPRQASRKTKTSKPQDHG 778
Query: 687 RLLVRGIPRRTVQGPARPRRQGLDPQEDDGQARRPRRVHLRQETPRIE 830
+ R PR+ + Q D QE D QA RPR + + +++
Sbjct: 779 KQATR--PRQASHKTRTKKPQDQDKQEQDKQAARPRHASCKTKASKLQ 824
Score = 28.3 bits (60), Expect = 9.3
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 5/109 (4%)
Frame = +3
Query: 513 QADRLRNQPHHVQGPRQHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRL 692
Q R N+P H Q R ++ ++PQ + + PG + + P
Sbjct: 515 QKSRKTNKPQHKQASRPRQASH--MTKTSKPQDQD-KKAARPGEKSCKKSK----PQAAS 567
Query: 693 LVRGIPRRTVQGPARPRRQGLD-----PQEDDGQARRPRRVHLRQETPR 824
+ P+ + ARPR+ PQ+ D QA RPR+ RQ PR
Sbjct: 568 RKKSKPQDQDKQAARPRQASRKTKTSKPQDQDKQAARPRQA-ARQARPR 615
>SB_44782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 227
Score = 29.1 bits (62), Expect = 5.3
Identities = 24/99 (24%), Positives = 38/99 (38%)
Frame = +3
Query: 528 RNQPHHVQGPRQHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLLVRGI 707
+ Q PRQ + P+ + + R P QD +Q R R R
Sbjct: 124 QGQDKQAARPRQASRKAKPSKPQGQAKQAARRKTSKPQDKQDKDKQAARKRQAR--TRQA 181
Query: 708 PRRTVQGPARPRRQGLDPQEDDGQARRPRRVHLRQETPR 824
R+ +P + PQ+ D QA RPR+ + +T +
Sbjct: 182 SRKKKTSKVKPSK----PQDQDKQAARPRQASRKTKTSK 216
>SB_24255| Best HMM Match : Herpes_PAP (HMM E-Value=2)
Length = 919
Score = 29.1 bits (62), Expect = 5.3
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +1
Query: 604 LKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKH 783
L+LE +VT S+R+ +S+F+ V GE D Q +A ++ +H
Sbjct: 557 LRLEGEVTISLRK-----QSTFSSLAQVRIFIGE--DPTSSRQPSYRVQAPATTWILKQH 609
Query: 784 AALGEFIFDK 813
+L EFIFD+
Sbjct: 610 ESLSEFIFDE 619
>SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 336 VVASLLHGEPLIPDGDGADVTLCSCGRS*GSNESEDSKENSPH 208
V+A LL G+P+ P G D L + G+ E KE +PH
Sbjct: 252 VLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIKEMNPH 293
>SB_29682| Best HMM Match : PKD_channel (HMM E-Value=0.0011)
Length = 318
Score = 28.3 bits (60), Expect = 9.3
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +1
Query: 622 VTNSIREVIKTCESSFNDYHLVDYLSGEFLDE 717
+ ++ EV E NDY ++DY+ +F ++
Sbjct: 187 INEALEEVSSDAEKQANDYEIIDYMMHKFKEQ 218
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,858,501
Number of Sequences: 59808
Number of extensions: 499344
Number of successful extensions: 1439
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2693287426
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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