Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_B05
         (765 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0082 + 897026-897028,897101-897350,898454-898608,898686-89...    29   4.1  
05_03_0109 + 8490841-8490940,8492098-8493057,8494055-8495520           28   9.4  

>04_01_0082 +
           897026-897028,897101-897350,898454-898608,898686-898967,
           899078-899160,899335-899485,899896-899952,900279-900479
          Length = 393

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 437 TIINWNYKFVHYYDCILYFYNHKFRQDYI 351
           ++ N  YK  H ++  L  Y+H  R+DYI
Sbjct: 205 SLCNKQYKLAHEFESHLSSYDHNHRKDYI 233


>05_03_0109 + 8490841-8490940,8492098-8493057,8494055-8495520
          Length = 841

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 404 YYDCILYFYNHKFRQDYIIKNINKGKQYLIYSQFDNR 294
           +YD  + +   K ++   +  I KGKQY+IYS  D +
Sbjct: 258 FYDAFVQWQMRKLKK---MHRIVKGKQYMIYSPLDRQ 291


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,644,195
Number of Sequences: 37544
Number of extensions: 216144
Number of successful extensions: 330
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)