Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_B04
(779 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 263 2e-71
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 263 2e-71
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 172 4e-44
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 89 5e-19
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 87 3e-18
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 77 2e-15
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 75 9e-15
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 41 2e-04
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 31 0.14
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 31 0.14
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 31 0.14
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 30 0.43
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 28 1.3
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 28 1.3
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 28 1.7
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 1.7
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 28 1.7
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 27 3.0
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 26 5.3
SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting endonucl... 26 7.0
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.2
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 263 bits (645), Expect = 2e-71
Identities = 135/237 (56%), Positives = 167/237 (70%), Gaps = 1/237 (0%)
Frame = +3
Query: 69 MVXFTVSXLRGXXDKXRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 248
MV FT +R K N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR
Sbjct: 1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60
Query: 249 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSE-KGFLINLIDSPGHVDFSSEV 425
DEQ+R +TIKSTAIS+F E+ + D+ D +E ++ FL+NLIDSPGHVDFSSEV
Sbjct: 61 ADEQERGVTIKSTAISLFAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEV 115
Query: 426 TAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXY 605
TAALRVTDGAL QTETVLRQA+ ERI+P++ +NK+DR Y
Sbjct: 116 TAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELY 175
Query: 606 QTFQRIVXNVNVIIATYNDDGGPMGEVRVDPXKGSVGFGSGLHGWAFTLKQFSXMYA 776
Q F R+V +VNV+I+TY D +G+ +V P KG+V F SGLHGWAFT++QF+ YA
Sbjct: 176 QNFARVVESVNVVISTYYDK--VLGDCQVFPDKGTVAFASGLHGWAFTVRQFANRYA 230
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 263 bits (645), Expect = 2e-71
Identities = 135/237 (56%), Positives = 167/237 (70%), Gaps = 1/237 (0%)
Frame = +3
Query: 69 MVXFTVSXLRGXXDKXRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 248
MV FT +R K N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR
Sbjct: 1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60
Query: 249 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSE-KGFLINLIDSPGHVDFSSEV 425
DEQ+R +TIKSTAIS+F E+ + D+ D +E ++ FL+NLIDSPGHVDFSSEV
Sbjct: 61 ADEQERGVTIKSTAISLFAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEV 115
Query: 426 TAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXY 605
TAALRVTDGAL QTETVLRQA+ ERI+P++ +NK+DR Y
Sbjct: 116 TAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELY 175
Query: 606 QTFQRIVXNVNVIIATYNDDGGPMGEVRVDPXKGSVGFGSGLHGWAFTLKQFSXMYA 776
Q F R+V +VNV+I+TY D +G+ +V P KG+V F SGLHGWAFT++QF+ YA
Sbjct: 176 QNFARVVESVNVVISTYYDK--VLGDCQVFPDKGTVAFASGLHGWAFTVRQFANRYA 230
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 172 bits (419), Expect = 4e-44
Identities = 103/228 (45%), Positives = 134/228 (58%), Gaps = 10/228 (4%)
Frame = +3
Query: 120 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISM 299
NIRN +++AHVDHGK+TL DSL++ GII+ AG RF D R+DE R IT+KS+AIS+
Sbjct: 18 NIRNFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITMKSSAISL 77
Query: 300 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 479
FF++ I+ D++ + EK +LINLIDSPGHVDFSSEV++A R+ DGA
Sbjct: 78 FFKV-------ISQNDEK-RVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVE 129
Query: 480 XXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVXNVNVIIATY- 656
QT TVLRQA +RIK IL +NKMDR + R+V VN +I T+
Sbjct: 130 GVCSQTITVLRQAWIDRIKVILVINKMDRLITELKLSPIEAHYHLLRLVEQVNAVIGTFY 189
Query: 657 ---------NDDGGPMGEVRVDPXKGSVGFGSGLHGWAFTLKQFSXMY 773
ND+ + P +G+V F S GWAF L QFS Y
Sbjct: 190 TGELMQLADNDEVISDEGIYFAPEQGNVVFASAYDGWAFCLDQFSEFY 237
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 89.4 bits (212), Expect = 5e-19
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 1/221 (0%)
Frame = +3
Query: 120 NIRNMSVIAHVDHGKSTLTDSLVSKAGI-IAGARAGETRFTDTRKDEQDRCITIKSTAIS 296
++R+ V H+ HGKS L D LV + R+TDT E++R ++IKST ++
Sbjct: 139 DVRSFIVAGHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKSTPLT 198
Query: 297 MFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXX 476
+ D + K+ F ID+PGHVDF EV A + ++DG +
Sbjct: 199 LAVS------------DMKGKT---FAFQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVI 243
Query: 477 XXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVXNVNVIIATY 656
T +++ AI + +L +NK+DR Y + ++ VN I
Sbjct: 244 EGVMINTTRIIKHAILHDMPIVLVLNKVDRLILELRLPPNDAYHKLRHVIDEVNDNICQI 303
Query: 657 NDDGGPMGEVRVDPXKGSVGFGSGLHGWAFTLKQFSXMYAD 779
+ D + RV P G+V F S G+ FTL F+ +Y D
Sbjct: 304 SKD----LKYRVSPELGNVCFASCDLGYCFTLSSFAKLYID 340
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 87.0 bits (206), Expect = 3e-18
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
Frame = +3
Query: 111 KXRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA--GETRF---TDTRKDEQDRCIT 275
+ + IRN+ + AH+D GK+T T+ ++ G I G+ D + E+++ IT
Sbjct: 55 RLKQIRNIGISAHIDSGKTTFTERVLYYTGRIKDIHEVRGKDNVGAKMDFMELEREKGIT 114
Query: 276 IKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 455
I+S A +E + N Q+ EK + IN+ID+PGH+DF+ EV ALRV DGA
Sbjct: 115 IQSAATHCTWERTVDQIE--ANEKQKTDFEKSYNINIIDTPGHIDFTIEVERALRVLDGA 172
Query: 456 LXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 566
+ QT TV RQ + I F+NKMDR
Sbjct: 173 VLVLCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDR 209
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 77.4 bits (182), Expect = 2e-15
Identities = 55/151 (36%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Frame = +3
Query: 120 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFT--DTRKDEQDRCITIKSTAI 293
+IRN+ +IAH+D GK+TLT+ ++ G + +T T D E+ R ITI S AI
Sbjct: 27 SIRNVGIIAHIDAGKTTLTEKMLYYGGFTSHFGNVDTGDTVMDYLPAERQRGITINSAAI 86
Query: 294 SMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXX 473
S + +QR INLID+PGH DF+ EV ++ V DGA+
Sbjct: 87 SFTWR------------NQR--------INLIDTPGHADFTFEVERSVAVLDGAVAIIDG 126
Query: 474 XXXXXXQTETVLRQAIAERIKPILFMNKMDR 566
QT+ V +QA I ++F+NKMDR
Sbjct: 127 SAGVEAQTKVVWKQATKRGIPKVIFVNKMDR 157
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 75.4 bits (177), Expect = 9e-15
Identities = 50/164 (30%), Positives = 77/164 (46%)
Frame = +3
Query: 123 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMF 302
+RN +VIAH+DHGKSTL+D ++ G+I +F D + E+ R IT+K+ SM
Sbjct: 58 VRNWAVIAHIDHGKSTLSDCILKLTGVI-NEHNFRNQFLDKLEVERRRGITVKAQTCSMI 116
Query: 303 FELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXX 482
+ + +L+NLID+PGHVDF +EV +L +G +
Sbjct: 117 YYYH----------------GQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
Query: 483 XXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTF 614
QT + A ++ + I +NK+D QTF
Sbjct: 161 IQAQTLSNFYMAFSQNLVIIPVLNKVDLPTADVDRTLIQVQQTF 204
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 40.7 bits (91), Expect = 2e-04
Identities = 37/146 (25%), Positives = 57/146 (39%), Gaps = 1/146 (0%)
Frame = +3
Query: 129 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 308
N+ I HVDHGK+TLT ++ + A + D +E+ R ITI S + +E
Sbjct: 55 NIGTIGHVDHGKTTLTAAITKCLSDLGQASFMDYSQIDKAPEEKARGITISSAHVE--YE 112
Query: 309 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXX 488
+ +D PGH D+ + DGA+
Sbjct: 113 TANRHYAH------------------VDCPGHADYIKNMITGAATMDGAIIVVSATDGQM 154
Query: 489 XQTETVLRQAIAERIKPI-LFMNKMD 563
QT L A +K I +++NK+D
Sbjct: 155 PQTREHLLLARQVGVKQIVVYINKVD 180
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 129 NMSVIAHVDHGKSTLTDSLVSKAG 200
N+ VI HVD GKST T L+ K G
Sbjct: 9 NVVVIGHVDSGKSTTTGHLIYKCG 32
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 129 NMSVIAHVDHGKSTLTDSLVSKAG 200
N+ VI HVD GKST T L+ K G
Sbjct: 9 NVVVIGHVDSGKSTTTGHLIYKCG 32
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 129 NMSVIAHVDHGKSTLTDSLVSKAG 200
N+ VI HVD GKST T L+ K G
Sbjct: 9 NVVVIGHVDSGKSTTTGHLIYKCG 32
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 29.9 bits (64), Expect = 0.43
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +3
Query: 132 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR----FTDTRKDEQDRCITIKSTAISM 299
++++ HVDHGK+TL D+ K+ I + G T+ FT D+ + IT T M
Sbjct: 174 VTLMGHVDHGKTTLLDAF-RKSTIASTEHGGITQKIGAFT-VPFDKGSKFITFLDTPGHM 231
Query: 300 FFELEEK 320
FE K
Sbjct: 232 AFEAMRK 238
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 28.3 bits (60), Expect = 1.3
Identities = 22/90 (24%), Positives = 43/90 (47%)
Frame = +3
Query: 162 KSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITN 341
K+ +T L S+ ++A A R+ D + ++ I +ST +S F D++FI
Sbjct: 462 KAGITTILNSRTSVLAAANPIFGRYDDMKTPGEN--IDFQSTILSRF------DMIFIVK 513
Query: 342 PDQREKSEKGFLINLIDSPGHVDFSSEVTA 431
+ E ++ ++I+ ++ SSE A
Sbjct: 514 DEHDETKDRNIARHVINLHTNLQESSETLA 543
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 28.3 bits (60), Expect = 1.3
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Frame = +3
Query: 129 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 308
N+ I HVD GKSTL +++ G++ R E + E + S A+ E
Sbjct: 240 NIVFIGHVDAGKSTLGGNILFLTGMV-DKRTMEK--IEREAKEAGKESWYLSWALDSTSE 296
Query: 309 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDF-SSEVTAALRVTDGAL 458
EK E + F +L+D+PGH + ++ + A + G L
Sbjct: 297 EREKGKTVEVGRAYFETEHRRF--SLLDAPGHKGYVTNMINGASQADIGVL 345
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -2
Query: 505 TVSVCTHTPD-TQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMN 329
T + C+ P+ T ST + +V+ S + ++ ST P ++ + S S V +
Sbjct: 575 TTTTCSSRPEETISTVSTTSTVSESGSSSASITSTYPSSTLSMTTSHLS-----SSSVHS 629
Query: 328 TKSFSSSSKNIEMAV 284
+ + SSSS++ M++
Sbjct: 630 SSAHSSSSRSSSMSL 644
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.9 bits (59), Expect = 1.7
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -2
Query: 508 STVSVCTHTPDTQSTT-TRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 332
+T S + +P + STT T +PS + S++ +S S+ S S S S
Sbjct: 135 TTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 194
Query: 331 NTKSFSSSSKNIEMAV 284
++ S SSSS + + +
Sbjct: 195 SSSSSSSSSSSSSVPI 210
Score = 27.1 bits (57), Expect = 3.0
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = -2
Query: 511 RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 332
++TVS + + T S+++ +PS + + TS S+ S S S S
Sbjct: 124 QTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSS 183
Query: 331 NTKSFSSSSKN 299
++ S SSSS +
Sbjct: 184 SSSSSSSSSSS 194
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +1
Query: 466 LTVCLVCVYKLKQYCVRLLPSASSLFCS*TKWTVLFLSSNLKLKN 600
L V + YKL+ RL +A S+ C WT LF SN+ +N
Sbjct: 348 LNVIGIAAYKLEDPVHRLFVTAFSVCCECLAWTSLF--SNISPEN 390
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -2
Query: 418 EEKSTCPGESIKLIKKPFSLFSRWSGFVMNTKSFSS-SSKNIEMAVDLMVMQRSCSSLRV 242
EE + P + K KK S F+ T +S S++NI+ A+DL+ + S S ++
Sbjct: 66 EEMESLPSKGGKGSKKAAKKNSSLDAFLNETPQTASYSARNIDDALDLLSLNNSSSKDKI 125
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 154 ITASQPSRTRWFPR-PVSLLAREPERPVSLTRVRTNK 261
+T S T + P P S + REP P+S R+R+++
Sbjct: 48 LTPEPSSNTFYAPSSPASAVRREPLSPMSFVRMRSHR 84
>SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting
endonuclease Cce1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 258
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 370 PFSLFSRWSGFVMNTK-SFSSSSKNIEMAVDLMVMQR 263
P S +S W+ V+NTK SFS ++M +L+ Q+
Sbjct: 168 PKSTYSYWAS-VLNTKASFSKKKSRVQMVKELIDGQK 203
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 25.4 bits (53), Expect = 9.2
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = -2
Query: 508 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMN 329
S+ S T TP + STT+ + S + S ++S S+ + + S S S +
Sbjct: 140 SSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSS-SASSSGSISSAD 198
Query: 328 TKSFSSSSKN 299
K+ S+SS +
Sbjct: 199 AKTVSASSNS 208
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,080,439
Number of Sequences: 5004
Number of extensions: 59569
Number of successful extensions: 211
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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