Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_B04
(779 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 34 0.002
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 33 0.002
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 30 0.021
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.60
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 1.4
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 1.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 4.2
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 5.6
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 7.4
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 7.4
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 7.4
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 7.4
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 9.7
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 9.7
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 33.9 bits (74), Expect = 0.002
Identities = 32/110 (29%), Positives = 51/110 (46%)
Frame = +3
Query: 129 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 308
N+ VI HVD GKST T L+ K G I R E +F + E + + K + +
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF-EKEAQEMGKG-SFKYAWVLDKLK 64
Query: 309 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 458
E + + I + ++ K + + +ID+PGH DF + D A+
Sbjct: 65 AERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAV 113
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 33.5 bits (73), Expect = 0.002
Identities = 32/110 (29%), Positives = 51/110 (46%)
Frame = +3
Query: 129 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 308
N+ VI HVD GKST T L+ K G I R E +F + E + + K + +
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF-EKEAQEMGKG-SFKYAWVLDKLK 64
Query: 309 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 458
E + + I + ++ K + + +ID+PGH DF + D A+
Sbjct: 65 AERERGITIDIALWKFETAK-YYVTIIDAPGHRDFIKNMITGTSQADCAV 113
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 30.3 bits (65), Expect = 0.021
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +3
Query: 363 EKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPI 542
E G + +D+PGH F S +TD + QT + A ++ I
Sbjct: 190 ESGERVTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKEQTLQSIEMAKDAKVPII 249
Query: 543 LFMNKMDR 566
+ +NK+D+
Sbjct: 250 VAINKIDK 257
Score = 29.5 bits (63), Expect = 0.037
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 132 MSVIAHVDHGKSTLTDSL 185
++++ HVDHGK+TL D+L
Sbjct: 148 VTIMGHVDHGKTTLLDAL 165
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.60
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 129 NMSVIAHVDHGKSTLTDSL 185
N+ I HV HGKST+ ++
Sbjct: 44 NIGTIGHVAHGKSTIVKAI 62
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 372 FLINLIDSPGHVDFSSEVTAALRVTDGAL 458
+ + +ID+PGH DF + D A+
Sbjct: 12 YYVTIIDAPGHRDFIKNMITGTSQADCAV 40
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 372 FLINLIDSPGHVDFSSEVTAALRVTDGAL 458
+ + +ID+PGH DF + D A+
Sbjct: 28 YYVTIIDAPGHRDFIKNMITGTSQADCAV 56
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 4.2
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = -3
Query: 732 EDQTRNQQSPX*GRHAPHPWDHHHRYMWL**R*HFXQYAGTSGIVLQLQVG 580
+ Q QQS + P P + + +Y SG+V+QLQ G
Sbjct: 1513 QQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQKEYGAVSGLVVQLQRG 1563
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 5.6
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -1
Query: 512 TQYCFSLYTHTRHTVNNHKGSISDTECSCYFRREINVSR*VNQV 381
T C S Y +RH N + + CS RE R +Q+
Sbjct: 227 TSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKDRRYDQL 270
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.4
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 291 ISMFFELEEKDLVFITNPDQREKSEKGFLI 380
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 7.4
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 475 TQSTTTRAP-SVTRSAAVTSEEKSTC 401
+ STTT +P + T+S V + STC
Sbjct: 324 SSSTTTTSPMTSTKSTIVRNHLNSTC 349
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = +2
Query: 689 CRPXQGLCWFRVW 727
C GL WF +W
Sbjct: 23 CSAASGLRWFEIW 35
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.4
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 291 ISMFFELEEKDLVFITNPDQREKSEKGFLI 380
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/29 (24%), Positives = 14/29 (48%)
Frame = +1
Query: 1 EKRTPLLASGRWFNXTKIINHLKWXISRY 87
+++ +L + W +HLKW S +
Sbjct: 46 DEKNQILTTNCWVTQIWTDHHLKWNASEF 74
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 9.7
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3
Query: 267 CITIKSTAISMFF 305
C T+K +A+ M+F
Sbjct: 688 CATVKGSAVDMYF 700
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,470
Number of Sequences: 438
Number of extensions: 4511
Number of successful extensions: 25
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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