Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_A19
         (835 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.5  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    22   6.1  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   6.1  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   8.0  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   8.0  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   8.0  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 12/48 (25%), Positives = 27/48 (56%)
 Frame = -3

Query: 752 KVISISLKSFNPKHEDMLCNSFSVTKPMSGLSNLDPTTGTILMFSISS 609
           +++++  ++   K ED+L   +++   MSG+     TT   L+++I S
Sbjct: 305 RLLAVYAQNSKDKPEDVLIIIYTILTYMSGVFYYLSTTVNPLLYNIMS 352


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 816 SKLTSAVMAIFGEHNNEGTRVKSYFNIIKIVQ 721
           +K+ S+    +  +NN     K Y+NII I Q
Sbjct: 301 TKIISSNNYNYKNYNNNYNSKKLYYNIINIEQ 332


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 816 SKLTSAVMAIFGEHNNEGTRVKSYFNIIKIVQ 721
           +K+ S+    +  +NN     K Y+NII I Q
Sbjct: 312 TKIISSNNYNYKNYNNNYNSKKLYYNIINIEQ 343


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 777 HNNEGTRVKSYFNIIKIVQ 721
           +NN     K Y+NII I Q
Sbjct: 103 YNNNNYNKKLYYNIINIEQ 121


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 777 HNNEGTRVKSYFNIIKIVQ 721
           +NN     K Y+NII I Q
Sbjct: 103 YNNNNYNKKLYYNIINIEQ 121


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 1   DTSTYRTDNSIVLKYFNN 54
           DT  YR DN+IV   F N
Sbjct: 255 DTIKYRNDNNIVRPDFIN 272


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,639
Number of Sequences: 438
Number of extensions: 4575
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)