Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_A15
         (614 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    25   1.5  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    25   1.9  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    24   3.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.4  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    24   4.5  

>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +2

Query: 251 SLPDMPLKKVEAGLTKMYDICKGLNKISMKSKLLEELTALLKCNERH 391
           ++P +P KK  A + K+YD C+  N +  K  L +E  A   C   H
Sbjct: 328 TIPTVP-KKSLAEVGKVYDRCELANDLLHKFHLPKEQVATWVCIAYH 373


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 261 SGKLFPKPKXRICMCCYFVCDIREAIYDWRGVS 163
           SGK+   P+ R   C Y   D+R  +Y   G+S
Sbjct: 178 SGKVEDSPETR---CLYHCIDLRTGLYTQNGIS 207


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 70  VKSKKXAVSYVQXMKSYFEXCNNFIFVAM 156
           V+S    +SYV+ +  Y   C  F+F A+
Sbjct: 272 VRSSLPRISYVKAIDIYLVMCFVFVFAAL 300


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +1

Query: 151  AMDFGNTTPVINSFTNVTN 207
            ++++GN T ++ S+ N+TN
Sbjct: 2987 SIEYGNMTSILPSYHNITN 3005


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -2

Query: 391 MPFITLQECSQFF*EFAFHRNFIESLTNIIHFSKAGFNFFQ 269
           M    +Q C Q F    F  NFI    +  +F KA F  FQ
Sbjct: 405 MNIYLVQNCCQLFFMTNFGINFILYCVSGQNFRKAIFGMFQ 445


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,131
Number of Sequences: 2352
Number of extensions: 11934
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)