Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_A15
         (614 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069312-1|AAL39457.1|  283|Drosophila melanogaster LD02616p pro...    65   8e-11
AE014298-1933|AAF48295.2|  283|Drosophila melanogaster CG11176-P...    65   8e-11
AY058602-1|AAL13831.1| 1257|Drosophila melanogaster LD29335p pro...    29   5.0  
AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA...    29   5.0  
AE014296-602|AAF47740.1| 2272|Drosophila melanogaster CG14967-PA...    29   6.6  

>AY069312-1|AAL39457.1|  283|Drosophila melanogaster LD02616p
           protein.
          Length = 283

 Score = 64.9 bits (151), Expect = 8e-11
 Identities = 36/103 (34%), Positives = 57/103 (55%)
 Frame = +2

Query: 239 GFGNSLPDMPLKKVEAGLTKMYDICKGLNKISMKSKLLEELTALLKCNERHLPDAQLQER 418
           GFGNSLP  P +KV  G  +   I K   + S+++ L  +L  LL+   +  PD +L+ R
Sbjct: 160 GFGNSLPHSPFEKVRHGKQEFEAIVKAHGEASVET-LSAQLMQLLRNKHKFWPDDELKTR 218

Query: 419 RPNLYEELSSIFVCVPEERYGTRAQTILLLTKTGHLEVLEISM 547
            PN  E LSS+ V + E  YG+R  +++L+     +  +E +M
Sbjct: 219 APNWGEGLSSLNVHIEEHAYGSRTHSVVLVDSENKMHFIEETM 261


>AE014298-1933|AAF48295.2|  283|Drosophila melanogaster CG11176-PA
           protein.
          Length = 283

 Score = 64.9 bits (151), Expect = 8e-11
 Identities = 36/103 (34%), Positives = 57/103 (55%)
 Frame = +2

Query: 239 GFGNSLPDMPLKKVEAGLTKMYDICKGLNKISMKSKLLEELTALLKCNERHLPDAQLQER 418
           GFGNSLP  P +KV  G  +   I K   + S+++ L  +L  LL+   +  PD +L+ R
Sbjct: 160 GFGNSLPHSPFEKVRHGKQEFEAIVKAHGEASVET-LSAQLMQLLRNKHKFWPDDELKTR 218

Query: 419 RPNLYEELSSIFVCVPEERYGTRAQTILLLTKTGHLEVLEISM 547
            PN  E LSS+ V + E  YG+R  +++L+     +  +E +M
Sbjct: 219 APNWGEGLSSLNVHIEEHAYGSRTHSVVLVDSENKMHFIEETM 261


>AY058602-1|AAL13831.1| 1257|Drosophila melanogaster LD29335p protein.
          Length = 1257

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 21/65 (32%), Positives = 35/65 (53%)
 Frame = -3

Query: 510  VRSNIVCALVPYLSSGTQTNIELNSSYKLGLRSCSWASGRCLSLHFKSAVNSSKSLLFIE 331
            VR  ++ +L PYLSS  ++++EL   + LG     +   R    H  + V+  K +LF+ 
Sbjct: 1139 VRGPLISSLFPYLSSTLRSDLEL-VLHDLG----EFFYKRSWPAHTDATVDFRKRVLFVF 1193

Query: 330  ILLSP 316
            + LSP
Sbjct: 1194 MNLSP 1198


>AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA,
            isoform A protein.
          Length = 1877

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 21/65 (32%), Positives = 35/65 (53%)
 Frame = -3

Query: 510  VRSNIVCALVPYLSSGTQTNIELNSSYKLGLRSCSWASGRCLSLHFKSAVNSSKSLLFIE 331
            VR  ++ +L PYLSS  ++++EL   + LG     +   R    H  + V+  K +LF+ 
Sbjct: 1759 VRGPLISSLFPYLSSTLRSDLEL-VLHDLG----EFFYKRSWPAHTDATVDFRKRVLFVF 1813

Query: 330  ILLSP 316
            + LSP
Sbjct: 1814 MNLSP 1818


>AE014296-602|AAF47740.1| 2272|Drosophila melanogaster CG14967-PA
           protein.
          Length = 2272

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +2

Query: 311 CKGLNKISMKSKLLEELTALLKCNERHLPDAQLQERRPNLYE 436
           C  L  +S+  KL +E  A+   + R L + Q++E+R NLYE
Sbjct: 471 CAELFNVSLLMKLEDEHIAMSVSHTRFLLE-QIEEKRSNLYE 511


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,769,457
Number of Sequences: 53049
Number of extensions: 480639
Number of successful extensions: 1429
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1427
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)