Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_A14
         (416 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ388479-1|ABD43194.1|   79|Anopheles gambiae adipokinetic hormo...    31   0.017
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   1.9  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   3.4  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    22   7.8  

>DQ388479-1|ABD43194.1|   79|Anopheles gambiae adipokinetic hormone
           I preproprotein protein.
          Length = 79

 Score = 31.1 bits (67), Expect = 0.017
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
 Frame = +1

Query: 1   LLFLVLACFIMAXAQLTFTSSWGGKR---------AAIAGTVSCR-HXXALASXYKLIQX 150
           +L +  +  ++  AQLTFT +WG +           +  G  +C+    +L   Y++IQ 
Sbjct: 9   VLLICASLMLITEAQLTFTPAWGKRSQGAMGINPLGSTFGQDACKTPVDSLLVIYRMIQA 68

Query: 151 EAEKLLLCQK 180
           EA+K++ C +
Sbjct: 69  EAQKIVDCSQ 78


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 27  HHGRSPTHFHIQLGWQAGCHRRHCVLQA 110
           HH     H H      AG H +H V+QA
Sbjct: 503 HHHHHHHHHHPTAADLAGYHHQHNVIQA 530


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 183 LSRHHRNGNTDKMPFNHYIIFS*SLKCI 266
           L+ HHRN +T +M     +IF   L CI
Sbjct: 331 LNYHHRNADTHEMSDWVRVIFLYWLPCI 358


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +3

Query: 30  HGRSPTHFHIQLGWQAGCHRRH 95
           HG SPTH H       G H  H
Sbjct: 416 HG-SPTHLHNHRSGGGGRHHHH 436


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 330,744
Number of Sequences: 2352
Number of extensions: 5986
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)