Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_A14
         (416 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC115399-1|AAI15400.1|  113|Homo sapiens gonadotropin-releasing ...    30   3.6  
AL121905-7|CAC29101.1|  113|Homo sapiens gonadotropin-releasing ...    30   3.6  
AF190640-1|AAG17539.1|   63|Homo sapiens endometrium-specific Gn...    30   3.6  

>BC115399-1|AAI15400.1|  113|Homo sapiens gonadotropin-releasing
           hormone 2 protein.
          Length = 113

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +2

Query: 20  LASSWPXPNSLSHPAG----VASGLPSPALCPAGTXXPW 124
           L+S+    N+L  PAG     A GLPS AL P     PW
Sbjct: 38  LSSAQDPQNALRPPAGSPVQTAHGLPSDALAPLDDSMPW 76


>AL121905-7|CAC29101.1|  113|Homo sapiens gonadotropin-releasing
           hormone 2 protein.
          Length = 113

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +2

Query: 20  LASSWPXPNSLSHPAG----VASGLPSPALCPAGTXXPW 124
           L+S+    N+L  PAG     A GLPS AL P     PW
Sbjct: 38  LSSAQDPQNALRPPAGSPVQTAHGLPSDALAPLDDSMPW 76


>AF190640-1|AAG17539.1|   63|Homo sapiens endometrium-specific
           GnRH-II protein.
          Length = 63

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +2

Query: 20  LASSWPXPNSLSHPAG----VASGLPSPALCPAGTXXPW 124
           L+S+    N+L  PAG     A GLPS AL P     PW
Sbjct: 12  LSSAQDPQNALRPPAGSPVQTAHGLPSDALAPLDDSMPW 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,866,354
Number of Sequences: 237096
Number of extensions: 937919
Number of successful extensions: 2363
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2358
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)