Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_A12
         (804 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   2.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   2.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   2.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   4.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   4.4  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   4.4  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   5.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   5.8  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    22   5.8  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   7.7  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 675 VFYLVCLGLVC 707
           +F LVCLG+VC
Sbjct: 4   LFMLVCLGIVC 14


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 675 VFYLVCLGLVC 707
           +F LVCLG+VC
Sbjct: 4   LFMLVCLGIVC 14


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 675 VFYLVCLGLVC 707
           +F LVCLG+VC
Sbjct: 4   LFMLVCLGIVC 14


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 393 TFWGIYAIDRELILPRSLDPYFPTWLNHV 479
           T W  Y I   L+  +S     P+W N++
Sbjct: 170 TPWDYYYIYHTLVAEQSYGLTLPSWTNNI 198


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 393 TFWGIYAIDRELILPRSLDPYFPTWLNHV 479
           T W  Y I   L+  +S     P+W N++
Sbjct: 185 TPWDYYYIYHTLVAEQSYGLTLPSWTNNI 213


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 393 TFWGIYAIDRELILPRSLDPYFPTWLNHV 479
           T W  Y I   L+  +S     P+W N++
Sbjct: 73  TPWDYYYIYHTLVAEQSYGLTLPSWTNNI 101


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 4/13 (30%), Positives = 11/13 (84%)
 Frame = +3

Query: 573 TYMLCYMVWIHVI 611
           +Y++CY +W++ +
Sbjct: 215 SYLVCYGIWVYFV 227


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -1

Query: 174 HXHAPGHSNSHNQSVXH 124
           H H  GH +SH  +  H
Sbjct: 415 HHHTMGHGHSHIHATPH 431


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 4/13 (30%), Positives = 11/13 (84%)
 Frame = +3

Query: 573 TYMLCYMVWIHVI 611
           +Y++CY +W++ +
Sbjct: 91  SYLVCYGIWVYFV 103


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
 Frame = +3

Query: 672 VVFYLVC---LGLVCSLYSLGEKFNKLV 746
           + FY+ C   LG+ C LY   +K  K +
Sbjct: 199 ISFYVPCIVMLGIYCRLYCYAQKHVKSI 226


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,881
Number of Sequences: 438
Number of extensions: 4923
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)