Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_A08
         (420 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    27   0.056
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   2.1  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   3.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   3.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   8.5  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 0.056
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -2

Query: 368 YFLLCTSSSVIKLA*RVCLCNGALHCESS--VHAAFSRSISRY 246
           Y+L+  +  +++L   VCLC  ++H ESS  +   FS S S Y
Sbjct: 196 YYLISFALLIMRLI-SVCLCGASVHSESSKVLPLLFSVSSSSY 237


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 291 RIFCSRCVLSFHIKVPNVNMGTTITK 214
           R+FCS     +      V++GTT+ K
Sbjct: 54  RLFCSEAAALWPKPTGEVHVGTTLVK 79


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 301 LSTANLLFTLRSLVPYQGTKCKHGYNNNKKS 209
           +ST+N L+T  S +    T     +N +  S
Sbjct: 31  ISTSNYLYTPSSTIDLYNTSSVSNFNESSSS 61


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 301 LSTANLLFTLRSLVPYQGTKCKHGYNNNKKS 209
           +ST+N L+T  S +    T     +N +  S
Sbjct: 31  ISTSNYLYTPSSTIDLYNTSSVSNFNESSSS 61


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 190 QAN*FVWIFCYC 225
           Q N  V+ FCYC
Sbjct: 545 QFNTIVFAFCYC 556


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,089
Number of Sequences: 336
Number of extensions: 1860
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)