Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_A08
         (420 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014650-1|AAT27274.1|  113|Drosophila melanogaster RE22403p pro...    84   8e-17
AE013599-1949|AAF58210.1|  113|Drosophila melanogaster CG12859-P...    84   8e-17

>BT014650-1|AAT27274.1|  113|Drosophila melanogaster RE22403p
           protein.
          Length = 113

 Score = 83.8 bits (198), Expect = 8e-17
 Identities = 41/109 (37%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
 Frame = +2

Query: 5   LSDAXLNLIKTQASRRAEMXREFLKQRTNPWKNAS-EAGYVFDTALQRFLSMKVTQFEYF 181
           LS+     IK +     ++ +EFLKQ +NP+++A+ E G VFD  L RF +M+V+ +E+F
Sbjct: 3   LSNEEQEFIKRKHEATLKLRQEFLKQSSNPYRHATGEGGTVFDAGLARFQAMRVSNYEHF 62

Query: 182 TVNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRSGELRYKDRLFK 328
               ++   G F +V+P+  +   +  ER  RE+K R+G++ YKDR FK
Sbjct: 63  KPTGKSFRTGLFAVVLPIALYAWALKAERDGREEKYRTGQVAYKDRQFK 111


>AE013599-1949|AAF58210.1|  113|Drosophila melanogaster CG12859-PA
           protein.
          Length = 113

 Score = 83.8 bits (198), Expect = 8e-17
 Identities = 41/109 (37%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
 Frame = +2

Query: 5   LSDAXLNLIKTQASRRAEMXREFLKQRTNPWKNAS-EAGYVFDTALQRFLSMKVTQFEYF 181
           LS+     IK +     ++ +EFLKQ +NP+++A+ E G VFD  L RF +M+V+ +E+F
Sbjct: 3   LSNEEQEFIKRKHEATLKLRQEFLKQSSNPYRHATGEGGTVFDAGLARFQAMRVSNYEHF 62

Query: 182 TVNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRSGELRYKDRLFK 328
               ++   G F +V+P+  +   +  ER  RE+K R+G++ YKDR FK
Sbjct: 63  KPTGKSFRTGLFAVVLPIALYAWALKAERDGREEKYRTGQVAYKDRQFK 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,050,467
Number of Sequences: 53049
Number of extensions: 300071
Number of successful extensions: 1065
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)