Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_A08
(420 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71267-1|CAA95851.2| 172|Caenorhabditis elegans Hypothetical pr... 35 0.027
Z74044-1|CAA98550.1| 548|Caenorhabditis elegans Hypothetical pr... 31 0.33
Z74039-11|CAA98508.1| 548|Caenorhabditis elegans Hypothetical p... 31 0.33
AF077307-1|AAC98095.1| 548|Caenorhabditis elegans acetyl cholin... 31 0.33
AC084159-14|AAK39369.2| 480|Caenorhabditis elegans Hypothetical... 30 0.77
AL110478-1|CAB54340.2| 537|Caenorhabditis elegans Hypothetical ... 28 3.1
Z81524-7|CAD54142.2| 597|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z81050-15|CAN86587.1| 597|Caenorhabditis elegans Hypothetical p... 27 4.1
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 27 5.5
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 27 5.5
AC024826-13|AAF60794.2| 305|Caenorhabditis elegans Serpentine r... 27 5.5
U80953-2|AAB52556.1| 1107|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z70203-4|CAA94107.1| 322|Caenorhabditis elegans Hypothetical pr... 26 9.5
U53338-1|AAA96189.2| 152|Caenorhabditis elegans Hypothetical pr... 26 9.5
U52002-5|AAB37729.2| 534|Caenorhabditis elegans Hypothetical pr... 26 9.5
U41036-9|ABA61867.1| 245|Caenorhabditis elegans Dopamine recept... 26 9.5
U41036-8|ABA61866.1| 590|Caenorhabditis elegans Dopamine recept... 26 9.5
U41036-7|ABA61865.1| 607|Caenorhabditis elegans Dopamine recept... 26 9.5
U41036-6|ABA61864.1| 605|Caenorhabditis elegans Dopamine recept... 26 9.5
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 26 9.5
AY485309-1|AAR37416.1| 607|Caenorhabditis elegans DOP-3 protein. 26 9.5
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 26 9.5
>Z71267-1|CAA95851.2| 172|Caenorhabditis elegans Hypothetical
protein W01A8.4 protein.
Length = 172
Score = 34.7 bits (76), Expect = 0.027
Identities = 22/105 (20%), Positives = 45/105 (42%)
Frame = +2
Query: 5 LSDAXLNLIKTQASRRAEMXREFLKQRTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFT 184
LSD + + + + +E+L++ +P + G D A+ R+ S +TQ E+F
Sbjct: 46 LSDEEKKAVLWRYRVKEILKKEYLRREYDPHSFKYKEGVTMDPAMFRWYSADMTQAEFFR 105
Query: 185 VNKRTSLFGFFVIVVPMFTFGTLIWNERTQREQKIRSGELRYKDR 319
RT + + + L++ + + G+L + DR
Sbjct: 106 FTPRTVFLYVGTVFALFYIYTRLMFVPMDKSNEACLDGKLLWWDR 150
>Z74044-1|CAA98550.1| 548|Caenorhabditis elegans Hypothetical
protein T26H10.1 protein.
Length = 548
Score = 31.1 bits (67), Expect = 0.33
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +2
Query: 53 AEMXREFLKQRTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVP 232
+E+ +FL R P ++++ + V +FE+F + F FV+
Sbjct: 466 SELSSKFLTSRMRPKSQKDNTFAAMQSSIKANRQLAVAEFEWFATVVERTCFVIFVVAFL 525
Query: 233 MFTFG 247
+ TFG
Sbjct: 526 IITFG 530
>Z74039-11|CAA98508.1| 548|Caenorhabditis elegans Hypothetical
protein T26H10.1 protein.
Length = 548
Score = 31.1 bits (67), Expect = 0.33
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +2
Query: 53 AEMXREFLKQRTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVP 232
+E+ +FL R P ++++ + V +FE+F + F FV+
Sbjct: 466 SELSSKFLTSRMRPKSQKDNTFAAMQSSIKANRQLAVAEFEWFATVVERTCFVIFVVAFL 525
Query: 233 MFTFG 247
+ TFG
Sbjct: 526 IITFG 530
>AF077307-1|AAC98095.1| 548|Caenorhabditis elegans acetyl choline
receptor alpha subunitDES-2 protein.
Length = 548
Score = 31.1 bits (67), Expect = 0.33
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +2
Query: 53 AEMXREFLKQRTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVP 232
+E+ +FL R P ++++ + V +FE+F + F FV+
Sbjct: 466 SELSSKFLTSRMRPKSQKDNTFAAMQSSIKANRQLAVAEFEWFATVVERTCFVIFVVAFL 525
Query: 233 MFTFG 247
+ TFG
Sbjct: 526 IITFG 530
>AC084159-14|AAK39369.2| 480|Caenorhabditis elegans Hypothetical
protein Y73B3A.6 protein.
Length = 480
Score = 29.9 bits (64), Expect = 0.77
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 160 FHGQKPLQCCVENITSL--RSVFPGVCSLFQELPXHFSTP 47
F +Q C++N L R++ PG SL Q L HF+ P
Sbjct: 326 FKDHATIQSCMQNGVDLTIRNIPPGTTSLIQPLDVHFNGP 365
>AL110478-1|CAB54340.2| 537|Caenorhabditis elegans Hypothetical
protein Y26D4A.2 protein.
Length = 537
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +1
Query: 238 YIWYLDMERENAA*TEDSQWRAPLQRQTLQASLITDELVHNRKYINEC 381
Y+W +D T + W+ R+ L +++ +HNR Y + C
Sbjct: 131 YLWKID--------TSEDGWKVTYLRKELNDTIVCGNFLHNRPYPDSC 170
>Z81524-7|CAD54142.2| 597|Caenorhabditis elegans Hypothetical
protein F32H5.7 protein.
Length = 597
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 176 IQTVLLSWTETFAMLCRK 123
+ T+L SWT F +LCRK
Sbjct: 218 LATLLKSWTRPFLLLCRK 235
>Z81050-15|CAN86587.1| 597|Caenorhabditis elegans Hypothetical
protein F32H5.7 protein.
Length = 597
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 176 IQTVLLSWTETFAMLCRK 123
+ T+L SWT F +LCRK
Sbjct: 218 LATLLKSWTRPFLLLCRK 235
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 137 LQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQR 277
+ FL++ T+ E+ ++KR L + V F F L W+ Q+
Sbjct: 411 MNSFLNLLETKTEWNDISKRVDLISRALFPVLFFVFNILYWSRFGQQ 457
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 137 LQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERTQR 277
+ FL++ T+ E+ ++KR L + V F F L W+ Q+
Sbjct: 411 MNSFLNLLETKTEWNDISKRVDLISRALFPVLFFVFNILYWSRFGQQ 457
>AC024826-13|AAF60794.2| 305|Caenorhabditis elegans Serpentine
receptor, class x protein12 protein.
Length = 305
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 67 GVLETKNKPLEKRFGGWLCFRHSIAKVSV 153
G++ KN L+ FG LCF H+IA V
Sbjct: 30 GIVVLKNPILKNAFGA-LCFSHTIANFGV 57
>U80953-2|AAB52556.1| 1107|Caenorhabditis elegans Hypothetical
protein B0412.3 protein.
Length = 1107
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 61 EXGVLETKNKPLEKRFGGWLCFRHSIAKVSVHE 159
+ G+L+TKN + R LCF HS A ++++
Sbjct: 273 QQGLLKTKNSVISTRGMCELCFLHSTALEAINQ 305
>Z70203-4|CAA94107.1| 322|Caenorhabditis elegans Hypothetical
protein C05G5.4 protein.
Length = 322
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 229 YNNNKKSKQTSSLVYGKIFKLCYFHGQKPLQ 137
YNN K +K T +V G K FHG++ L+
Sbjct: 25 YNNLKINKDTKVIVQGFTGKQGTFHGKQMLE 55
>U53338-1|AAA96189.2| 152|Caenorhabditis elegans Hypothetical
protein C05E11.6 protein.
Length = 152
Score = 26.2 bits (55), Expect = 9.5
Identities = 19/83 (22%), Positives = 35/83 (42%)
Frame = -3
Query: 301 LSTANLLFTLRSLVPYQGTKCKHGYNNNKKSKQTSSLVYGKIFKLCYFHGQKPLQCCVEN 122
LS L+ L SL + K N++K+ +T IF++ + + C
Sbjct: 10 LSLLVLILVLISLTDAHASSWKSILNSDKRM-ETKQHSLESIFRVRRTYIDENENCGSHE 68
Query: 121 ITSLRSVFPGVCSLFQELPXHFS 53
+ + ++ +C L EL HF+
Sbjct: 69 LEMVHTIMDRICMLCHELRSHFA 91
>U52002-5|AAB37729.2| 534|Caenorhabditis elegans Hypothetical
protein F08B4.5 protein.
Length = 534
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/18 (55%), Positives = 17/18 (94%)
Frame = +1
Query: 307 LQRQTLQASLITDELVHN 360
L++QTLQ+SLI++EL+ +
Sbjct: 56 LKKQTLQSSLISEELIRD 73
>U41036-9|ABA61867.1| 245|Caenorhabditis elegans Dopamine receptor
protein 3, isoformd protein.
Length = 245
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 188 NKRTSLFGFFVIVVPMFTFGTLIWNERTQRE--QKIRSGELRYKDRL 322
N +S+F FF+ + M T+I+ QRE + +R + D++
Sbjct: 166 NMISSIFSFFIPCIAMIILYTIIFRRLRQRERARSLRQAQRSENDKI 212
>U41036-8|ABA61866.1| 590|Caenorhabditis elegans Dopamine receptor
protein 3, isoformc protein.
Length = 590
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 188 NKRTSLFGFFVIVVPMFTFGTLIWNERTQRE--QKIRSGELRYKDRL 322
N +S+F FF+ + M T+I+ QRE + +R + D++
Sbjct: 164 NMISSIFSFFIPCIAMIILYTIIFRRLRQRERARSLRQAQRSENDKI 210
>U41036-7|ABA61865.1| 607|Caenorhabditis elegans Dopamine receptor
protein 3, isoformb protein.
Length = 607
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 188 NKRTSLFGFFVIVVPMFTFGTLIWNERTQRE--QKIRSGELRYKDRL 322
N +S+F FF+ + M T+I+ QRE + +R + D++
Sbjct: 181 NMISSIFSFFIPCIAMIILYTIIFRRLRQRERARSLRQAQRSENDKI 227
>U41036-6|ABA61864.1| 605|Caenorhabditis elegans Dopamine receptor
protein 3, isoforma protein.
Length = 605
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 188 NKRTSLFGFFVIVVPMFTFGTLIWNERTQRE--QKIRSGELRYKDRL 322
N +S+F FF+ + M T+I+ QRE + +R + D++
Sbjct: 179 NMISSIFSFFIPCIAMIILYTIIFRRLRQRERARSLRQAQRSENDKI 225
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 359 LCTSSSVIKLA*RVCLCNGALHCESSVH 276
LC+S+ K R C+ N LH E S H
Sbjct: 131 LCSSNYHGKRCNRYCIANAKLHWECSTH 158
>AY485309-1|AAR37416.1| 607|Caenorhabditis elegans DOP-3 protein.
Length = 607
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 188 NKRTSLFGFFVIVVPMFTFGTLIWNERTQRE--QKIRSGELRYKDRL 322
N +S+F FF+ + M T+I+ QRE + +R + D++
Sbjct: 181 NMISSIFSFFIPCIAMIILYTIIFRRLRQRERARSLRQAQRSENDKI 227
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 359 LCTSSSVIKLA*RVCLCNGALHCESSVH 276
LC+S+ K R C+ N LH E S H
Sbjct: 131 LCSSNYHGKRCNRYCIANAKLHWECSTH 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,539,358
Number of Sequences: 27780
Number of extensions: 166692
Number of successful extensions: 563
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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