Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_A07
         (652 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p...    34   0.015
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce...    34   0.020
SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyc...    33   0.036
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats...    33   0.036
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz...    32   0.083
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha...    29   0.44 
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch...    28   1.0  
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar...    26   4.1  
SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces pom...    25   7.2  
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ...    25   9.5  
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha...    25   9.5  

>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 335

 Score = 34.3 bits (75), Expect = 0.015
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +1

Query: 82  RLLQTAPXGPSP-NGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVK- 255
           ++L      P P  G  +   Q+    G  +L++G+ P +    PAN   F+G+E  +  
Sbjct: 70  KILGKGRPAPKPLGGPVSGLYQIARHEGVRSLWRGLVPSLTMLLPANTVQFLGYEQLLPL 129

Query: 256 FLDWVAP 276
           + DW  P
Sbjct: 130 YSDWGFP 136



 Score = 27.5 bits (58), Expect = 1.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 145 LMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKF 258
           L ++ GP AL+KG  P  ++  P+ A     + +  K+
Sbjct: 290 LWKRGGPKALWKGTLPRCVKVAPSCAIMISSYHLTKKY 327


>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 371

 Score = 33.9 bits (74), Expect = 0.020
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +1

Query: 64  PAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFE 243
           P  VL   LQ+    P+ N    + + +    G    Y G+    IR  PA++  F+ FE
Sbjct: 306 PHEVLRTRLQSLD-APTHNSATLLIRDIWRSEGWRKYYSGMATNFIRTIPASSVTFLSFE 364

Query: 244 MAVKFLD 264
           +  K+L+
Sbjct: 365 IVRKWLN 371



 Score = 27.1 bits (57), Expect = 2.3
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 121 GMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFE 243
           G  +  + +    G   LY+GV P+M+   P+ +  FV +E
Sbjct: 53  GTLSSMRTIFHNEGIAGLYRGVGPMMLGYLPSWSIYFVVYE 93


>SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 300

 Score = 33.1 bits (72), Expect = 0.036
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = +1

Query: 112 SPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFLD 264
           +P     + K +++  GPT+ +KG+TP ++   P     F   +  + F D
Sbjct: 246 NPQSGFTILKNMLKFEGPTSFFKGLTPKLLTTGPKLVFSFTMAQTLIPFFD 296


>SPAC4G9.20c |||mitochondrial carrier with solute carrier
           repeats|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 302

 Score = 33.1 bits (72), Expect = 0.036
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 139 KQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFE 243
           K +  + G    Y+G  PV++RA PANA  F  +E
Sbjct: 259 KGIYTKAGLRGFYRGFVPVLVRAAPANAVTFYVYE 293


>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 298

 Score = 31.9 bits (69), Expect = 0.083
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
 Frame = +1

Query: 64  PAXVLXRLLQTAPX----GPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACF 231
           P  V+   +QT P      P  N        +  + G TALYKG  P ++R  P      
Sbjct: 219 PFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVPKVLRLGPGGGILL 278

Query: 232 VGFEMAVKF 258
           V F   ++F
Sbjct: 279 VVFNSVIEF 287



 Score = 31.1 bits (67), Expect = 0.14
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +1

Query: 64  PAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACF 231
           P  V+   +Q +      NG     K++++  GP  LY+G+ P ++   P  A  F
Sbjct: 28  PLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKF 83


>SPAC17H9.08 |||mitochondrial coenzyme A
           transporter|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 326

 Score = 29.5 bits (63), Expect = 0.44
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +1

Query: 112 SPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 261
           S +G+    K +    G   LY+G T  + R FP     FV +E   + L
Sbjct: 58  SRHGLYKAIKHIYHVYGLHGLYQGHTATLYRVFPYAGIKFVAYEQVRRVL 107


>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 642

 Score = 28.3 bits (60), Expect = 1.0
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -2

Query: 354 FYYNLTPTTL-HFSIIFSYYYFTLSKVWCN 268
           FY    PT L H  ++  Y    L+++WCN
Sbjct: 212 FYNETLPTLLNHMQVLNEYRVSNLNEIWCN 241


>SPBC530.10c |anc1||adenine nucleotide carrier
           Anc1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 322

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 121 GMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACF 231
           G+   FK+   + G  +L++G T  ++R FP  A  F
Sbjct: 73  GIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNF 109


>SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 431

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -2

Query: 357 LFYYNLTPTTLHFSII---FSYYYFTLSKVWCNPIQEL 253
           +F + L+  TL+   I   F  Y  TLSK W NP + L
Sbjct: 65  IFIFQLSILTLYICCITFRFIRYPGTLSKTWKNPSEVL 102


>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 317

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 145 LMEQXGPTALYKGVTPVMIRAFPANAACFVGFE 243
           +  + G  ALY G+   ++   P  + CF  FE
Sbjct: 180 VQHEGGYPALYNGLPATLLNVVPYVSICFFTFE 212


>SPAC20G8.08c |fft1||fun thirty related protein
           Fft1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 944

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 306 SYYYFTLSKVWCNPIQEL 253
           +YY  T S + C+PIQ+L
Sbjct: 26  NYYLLTSSPIECSPIQQL 43


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,351,201
Number of Sequences: 5004
Number of extensions: 42644
Number of successful extensions: 111
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)