Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_A07
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_1015 - 22255135-22255693,22256437-22256836,22257938-222583... 48 5e-06
01_01_0877 - 6878905-6879600,6880696-6880968 41 0.001
12_01_0019 - 135627-135983,136564-136797,137118-137196,137268-13... 40 0.001
11_01_0021 - 143576-143932,144434-144667,144988-145066,145138-14... 40 0.001
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 39 0.003
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 33 0.15
03_01_0644 - 4719954-4720022,4720445-4720912,4721009-4721312,472... 33 0.20
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 33 0.26
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 33 0.26
10_07_0101 - 12872296-12873288 32 0.46
01_07_0289 + 42540059-42541141 32 0.46
12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629... 31 0.60
09_04_0437 - 17587944-17588909 31 0.80
09_03_0174 - 13097138-13098265 31 1.1
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991... 31 1.1
03_01_0534 + 3996479-3997458,3997938-3998265 30 1.4
07_03_0117 + 13589997-13590998 30 1.8
03_02_0148 - 5928703-5928931,5929099-5929171,5929288-5929408,592... 30 1.8
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 29 2.4
03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648 29 2.4
04_04_0575 - 26342697-26342885,26343030-26343165,26343279-263437... 29 3.2
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 29 3.2
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 28 5.6
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 28 5.6
04_04_0048 + 22351788-22352177,22353175-22353711 28 5.6
11_04_0086 + 13362788-13362937,13363887-13363970,13364233-133642... 27 9.8
>10_08_1015 -
22255135-22255693,22256437-22256836,22257938-22258371,
22259586-22259977
Length = 594
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 55 SALPAXVLXRLLQTAPX-GPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACF 231
S P V+ ++Q P +G F++++ G LYKG P M R+ PANAACF
Sbjct: 524 SVYPTDVVKSVIQVDDYKNPKYSGSMDAFRKILAADGVKGLYKGFGPAMARSVPANAACF 583
Query: 232 VGFEM 246
+ +E+
Sbjct: 584 LAYEV 588
Score = 35.5 bits (78), Expect = 0.037
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 115 PNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 261
P G V K ++ + G L+KG+ P M R P NA F +E ++L
Sbjct: 150 PKGPIDVAKHVVREAGMKGLFKGLVPTMGREVPGNAVMFGVYEGTKQYL 198
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 121 GMXAVFKQLMEQXGPTA-LYKGVTPVMIRAFPANAACFVGFEMAVKFL 261
G V KQ++ G L+KG+ P + R P NA F +E ++L
Sbjct: 449 GPVDVAKQVLRSEGGVGGLFKGLGPTLAREVPGNALMFGVYEAIKQYL 496
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 55 SALPAXVLXRLLQTAPXG-PSPNGMXAVFKQLMEQXGPTALYKGVTPVMIR 204
S P V+ ++Q P +G FK+++ G LYKG P M R
Sbjct: 226 SVYPTDVVKSVIQVDDYKKPRYSGSVDAFKKILAADGVKGLYKGFGPAMAR 276
>01_01_0877 - 6878905-6879600,6880696-6880968
Length = 322
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 64 PAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFE 243
P V+ LQ P G+ F++ + + G L++G+ + RAF N A F +E
Sbjct: 243 PLDVVKSRLQAQGYPPRYRGIADCFRRSVREEGLPVLWRGLGTAVARAFVVNGAIFSAYE 302
Query: 244 MAVKFL 261
+A++FL
Sbjct: 303 LALRFL 308
>12_01_0019 -
135627-135983,136564-136797,137118-137196,137268-137383,
137847-137991,138177-138594,138644-138649,139315-139945
Length = 661
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 64 PAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFE 243
P V+ + TAP G +P M + ++ GP L+KG P P A F G+E
Sbjct: 575 PFDVMKTRMMTAPPG-TPVSMQLIVFSILRNEGPLGLFKGAIPRFFWIAPLGAMNFAGYE 633
Query: 244 MAVK 255
+A K
Sbjct: 634 LAKK 637
>11_01_0021 -
143576-143932,144434-144667,144988-145066,145138-145253,
145717-145861,146048-146465,147206-147869
Length = 670
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 64 PAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFE 243
P V+ + TAP G +P M + ++ GP L+KG P P A F G+E
Sbjct: 584 PFDVMKTRMMTAPPG-TPVSMQLIVFSILRNEGPLGLFKGAIPRFFWIAPLGAMNFAGYE 642
Query: 244 MAVK 255
+A K
Sbjct: 643 LAKK 646
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 118 NGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 261
NGM F++ + G ALYKG+ P ++ P+ A FV +E K L
Sbjct: 300 NGMIDAFRKTVRYEGVGALYKGLVPNSVKVVPSIAIAFVTYEFVQKVL 347
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 88 LQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFE 243
L A P+ G+ VFK + ++ G ALY+GV P +I P F +E
Sbjct: 168 LGNAGRQPAYGGIKDVFKTVYKEGGARALYRGVGPTLIGILPYAGLKFYIYE 219
>03_01_0644 -
4719954-4720022,4720445-4720912,4721009-4721312,
4722321-4722745
Length = 421
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 82 RLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACF 231
R AP G + G+ V + +++ G +LYKG+ P +I P+ A +
Sbjct: 245 RTRMVAPGGEALGGVIGVARHMIQTEGFFSLYKGLVPSLISMAPSGAVFY 294
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 118 NGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVK 255
N F +++ + GP+ LY+G+TP +I P A + ++ K
Sbjct: 266 NNFLHAFVKILREEGPSELYRGLTPSLIGVVPYAATNYYAYDTLKK 311
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 145 LMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 261
+ME G LYKG+ P I+ PA F+ +E K L
Sbjct: 373 IMENEGIGGLYKGLGPSCIKLMPAAGISFMCYEACKKIL 411
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 94 TAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVK 255
T G N + A+ K + E+ GPT LY+G+TP +I P A + ++ K
Sbjct: 257 TIQRGVYDNFLHALVKIVREE-GPTELYRGLTPSLIGVVPYAATNYFAYDTLKK 309
>10_07_0101 - 12872296-12873288
Length = 330
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = +1
Query: 52 WSALPAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACF 231
W+ + ++QTA GP G ++++ G LY+G ++ P++AA +
Sbjct: 156 WTPVDVVSQRLMVQTAAAGPPYRGGADALRRILRADGVRGLYRGFGVSVLTYAPSSAAWW 215
Query: 232 VGFEMAVKFLDWVA 273
+ A + + W A
Sbjct: 216 ASYATAQRLI-WRA 228
>01_07_0289 + 42540059-42541141
Length = 360
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 106 GPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 261
G + G VF ++ GP LY+G++ V++ + ++A F E+A L
Sbjct: 101 GAAAGGSWQVFLDILRTDGPLGLYRGLSAVILGSASSSAVYFGTCELAKSLL 152
>12_02_0618 -
21262021-21262117,21262429-21262466,21262933-21262986,
21263274-21263438,21263523-21263759,21263857-21263918,
21264543-21264656,21264816-21264942,21266200-21266218,
21266338-21266428,21266932-21267094,21267182-21267330,
21268147-21268287,21268368-21268533,21268568-21268631,
21268729-21269084,21269759-21269977,21270328-21270433,
21270713-21270942
Length = 865
Score = 31.5 bits (68), Expect = 0.60
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 121 GMXAVFKQLMEQXGPTALYKGVTPVMIRA 207
GM +F Q+++ GP +LY G+ P + R+
Sbjct: 668 GMGTIFTQMVQVEGPRSLYLGLAPALTRS 696
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 109 PSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRA 207
PS V K+++ + G AL+KGV P M RA
Sbjct: 755 PSRTSTIGVLKKIVAEEGVKALWKGVGPAMARA 787
>09_04_0437 - 17587944-17588909
Length = 321
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 85 LLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAAC 228
LLQ P P G AV Q++ GPT L GV+ M+R + C
Sbjct: 57 LLQQQP--PRRPGPIAVCAQILRAEGPTGLLSGVSATMLRQTLYSTTC 102
>09_03_0174 - 13097138-13098265
Length = 375
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 37 SRSLGWSALPAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKG-VTPVMI 201
SR GWS+LP VL R+L + PN V +Q ++ Y +TP+++
Sbjct: 8 SRVRGWSSLPTDVLVRILGSLRWSSHPNA-ALVCRQWRSAVSLSSFYPAWITPLLL 62
>01_05_0099 -
18098169-18098390,18098878-18098972,18099063-18099131,
18099277-18099352,18101412-18101524,18104137-18104185,
18104540-18104572,18105446-18105552,18106892-18106990,
18107122-18107203
Length = 314
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 85 LLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAA--CFV 234
L TAP G + + F+ +++ G LY+G++P ++ FP AA CF+
Sbjct: 54 LSSTAPPG---RVIISGFQHILKNEGLPGLYRGLSPTIVALFPTWAAKYCFM 102
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = +1
Query: 121 GMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFLDWVAPN 279
G+ KQ+ ++ G Y+G ++R P F +EM + + + P+
Sbjct: 262 GVIDCIKQVYQKEGIPGFYRGCATNLLRTTPNAVITFTSYEMINRLMHQLLPH 314
>03_01_0534 + 3996479-3997458,3997938-3998265
Length = 435
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/70 (24%), Positives = 34/70 (48%)
Frame = +1
Query: 52 WSALPAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACF 231
W+ + ++QT+ G+ A FK+++ G LY+G ++ P+NA +
Sbjct: 151 WTPVDVISQRLMVQTSSTCRYRGGVDA-FKKILLADGVRGLYRGFGLSIVTYAPSNAVWW 209
Query: 232 VGFEMAVKFL 261
+ MA +F+
Sbjct: 210 ASYAMAQRFI 219
>07_03_0117 + 13589997-13590998
Length = 333
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 106 GPSPNGMXAV--FKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFLDWVAPN 279
G +P G AV +++ G L++G +R F A F+ +E +FL AP+
Sbjct: 72 GAAPRGAGAVQMLREIGRGEGVAGLFRGNGANALRVFHTKALHFMAYERYKRFLLGAAPS 131
Query: 280 L 282
L
Sbjct: 132 L 132
>03_02_0148 -
5928703-5928931,5929099-5929171,5929288-5929408,
5929907-5929952,5930361-5930571,5930837-5930986,
5931122-5931179,5931285-5931400,5931986-5932091
Length = 369
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = +1
Query: 64 PAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFE 243
P V+ LQ S NG + G + L+KG P +I PA+A F
Sbjct: 278 PLDVIKTRLQVQGSTTSYNGWLDAITKTWANEGMSGLFKGSIPRIIWYIPASAFTF---- 333
Query: 244 MAVKFL 261
MAV+FL
Sbjct: 334 MAVEFL 339
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 73 VLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFE 243
V R++ T+ N FKQ++ + G +L+KG ++RA A A G++
Sbjct: 309 VRRRMMMTSGEAVKYNSSLDAFKQIVAKEGAKSLFKGAGANILRAV-AGAGVLAGYD 364
>03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648
Length = 365
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +1
Query: 112 SPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFLD 264
S + + VF+ ++++ G L +G P M+ PA A C+ +E + F +
Sbjct: 307 SSSSIGDVFRTIIKRDGYAGLMRGWKPRMLFHAPAAAICWSTYEASKSFFE 357
>04_04_0575 -
26342697-26342885,26343030-26343165,26343279-26343795,
26344286-26344381,26344933-26345011,26345329-26345712
Length = 466
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 88 LQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKF 258
L +A G+ V +LM GP LY G+ ++ P A F +E+ F
Sbjct: 128 LLSATGSQQKMGLGQVVDRLMSASGPAGLYSGIGWSVLGKLPGLGARFGTYELLTAF 184
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 109 PSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFE 243
P G+ VF+ + + G ALY+GV P ++ P F +E
Sbjct: 172 PKYGGIKDVFRGVYSEGGVRALYRGVGPTLMGILPYAGLKFYIYE 216
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = +1
Query: 64 PAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFE 243
P L LLQT S G+ K+L + G YKG ++R P A ++ +E
Sbjct: 47 PLERLKILLQTRTNEFSSLGVLKSLKKLKQHDGILGFYKGNGASVLRIVPYAALHYMAYE 106
Query: 244 MAVKFLDWVAPN 279
++ W+ N
Sbjct: 107 ---RYRCWILNN 115
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 122 PFGDGPXGAVCRRRXKTXAGNADQPSERD 36
PFG GP G V R+ K +G E D
Sbjct: 165 PFGGGPPGRVKRKNQKKASGGGGDGEEED 193
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 122 PFGDGPXGAVCRRRXKTXAGNADQPSERD 36
PFG GP G V R+ K +G E D
Sbjct: 188 PFGGGPPGRVKRKNQKKASGGGGDGEEED 216
>04_04_0048 + 22351788-22352177,22353175-22353711
Length = 308
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +1
Query: 109 PSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 261
P G+ F +++ G L+KGV P RAF N ++ A F+
Sbjct: 156 PRYTGIFDAFTKIVRAEGFRGLWKGVVPNAQRAFLVNMGELTCYDQAKHFI 206
>11_04_0086 +
13362788-13362937,13363887-13363970,13364233-13364294,
13365146-13365507,13365928-13366142,13366236-13366292
Length = 309
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 118 NGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVK 255
N A+++ ++ G AL+KG P ++RA N ++ +V+
Sbjct: 160 NAFHALYRIAADE-GVLALWKGAGPTVVRAMSLNMGMLASYDQSVE 204
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,639,871
Number of Sequences: 37544
Number of extensions: 264048
Number of successful extensions: 591
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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