Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_A07
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein. 79 3e-15
X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein... 79 3e-15
U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation... 79 3e-15
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical pr... 31 0.54
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z71259-11|CAI46575.1| 370|Caenorhabditis elegans Hypothetical p... 30 1.2
Z71259-10|CAA95794.4| 373|Caenorhabditis elegans Hypothetical p... 30 1.2
U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical p... 29 2.9
Z68316-6|CAA92682.2| 357|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z49070-1|CAA88869.1| 384|Caenorhabditis elegans Hypothetical pr... 28 5.0
X76116-1|CAA53722.1| 384|Caenorhabditis elegans carrier protein... 28 5.0
AF016675-4|AAB66137.1| 356|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein.
Length = 312
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = +1
Query: 61 LPAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGF 240
+PA VL LQTAP G P+G+ V ++++ + GP AL+KG PVM+RAFPANAACF G
Sbjct: 224 IPADVLKSRLQTAPEGKYPDGIRGVLREVLREEGPRALFKGFWPVMLRAFPANAACFFGL 283
Query: 241 EMAV 252
E+ +
Sbjct: 284 ELTL 287
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +1
Query: 94 TAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVK 255
+A G +G V K+L +Q G +++Y+G ++R PA+AA +E K
Sbjct: 139 SAGSGVHYDGPLDVVKKLYKQGGISSIYRGTGATLLRDIPASAAYLSVYEYLKK 192
>X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein
(c1) protein.
Length = 312
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = +1
Query: 61 LPAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGF 240
+PA VL LQTAP G P+G+ V ++++ + GP AL+KG PVM+RAFPANAACF G
Sbjct: 224 IPADVLKSRLQTAPEGKYPDGIRGVLREVLREEGPRALFKGFWPVMLRAFPANAACFFGL 283
Query: 241 EMAV 252
E+ +
Sbjct: 284 ELTL 287
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +1
Query: 94 TAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVK 255
+A G +G V K+L +Q G +++Y+G ++R PA+AA +E K
Sbjct: 139 SAGSGVHYDGPLDVVKKLYKQGGISSIYRGTGATLLRDIPASAAYLSVYEYLKK 192
>U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation
abnormal protein 1 protein.
Length = 312
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = +1
Query: 61 LPAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGF 240
+PA VL LQTAP G P+G+ V ++++ + GP AL+KG PVM+RAFPANAACF G
Sbjct: 224 IPADVLKSRLQTAPEGKYPDGIRGVLREVLREEGPRALFKGFWPVMLRAFPANAACFFGL 283
Query: 241 EMAV 252
E+ +
Sbjct: 284 ELTL 287
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +1
Query: 94 TAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVK 255
+A G +G V K+L +Q G +++Y+G ++R PA+AA +E K
Sbjct: 139 SAGSGVHYDGPLDVVKKLYKQGGISSIYRGTGATLLRDIPASAAYLSVYEYLKK 192
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +1
Query: 31 CRSRSLGWSALPAXVLXRLLQTAPXGPS----PNGMXAVFKQLMEQXGPTALYKGVTPVM 198
C S ++ P ++ LQ P P+ M FK +++ G T LY+G+TP
Sbjct: 446 CSSTCGQLASYPLALVRTRLQARAISPKNSTQPDTMVGQFKHILQTEGFTGLYRGITPNF 505
Query: 199 IRAFPANAACFVGFEMAVKFL 261
++ PA + +V +E K L
Sbjct: 506 MKVIPAVSISYVVYEKVRKQL 526
>Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical
protein C54G10.4b protein.
Length = 360
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 139 KQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 261
KQ + G + G+ +IRAFP+NAA F E + L
Sbjct: 235 KQTYLERGYRGFFVGLNSALIRAFPSNAATFFTVEWTYRIL 275
>Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical
protein C54G10.4a protein.
Length = 310
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 139 KQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 261
KQ + G + G+ +IRAFP+NAA F E + L
Sbjct: 235 KQTYLERGYRGFFVGLNSALIRAFPSNAATFFTVEWTYRIL 275
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 64 PAXVLXRLLQTAPXGPSP--NGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVG 237
PA V+ LQ A NG+ ++L+++ GP +L+KG + R+ P A +
Sbjct: 581 PADVIKTRLQVAARAGQTTYNGVIDCARKLIKEEGPMSLWKGTAARVCRSSPQFAVTLLT 640
Query: 238 FEM 246
+E+
Sbjct: 641 YEV 643
>Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical
protein R07B7.10 protein.
Length = 285
Score = 31.1 bits (67), Expect = 0.71
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +1
Query: 49 GW-SALPAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAA 225
GW S P V+ +Q + + K + + G A Y+G + +R F NA
Sbjct: 214 GWISVCPLEVVKNRIQADKSHKTLSPKEMTLK-IYREDGLRAFYRGGWAISLRGFVVNAV 272
Query: 226 CFVGFEMAVKFLD 264
FV +E F D
Sbjct: 273 IFVVYENTYSFFD 285
>Z71259-11|CAI46575.1| 370|Caenorhabditis elegans Hypothetical
protein F13G3.7b protein.
Length = 370
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 28 LCRSRSLGWSALPAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKG 183
LC S ++ P V+ LQ NGM F +++ Q G ALYKG
Sbjct: 58 LCSSWTIRCMLYPMSVVKSRLQLQRQNNVYNGMRDAFVKIIRQEGIGALYKG 109
>Z71259-10|CAA95794.4| 373|Caenorhabditis elegans Hypothetical
protein F13G3.7a protein.
Length = 373
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 28 LCRSRSLGWSALPAXVLXRLLQTAPXGPSPNGMXAVFKQLMEQXGPTALYKG 183
LC S ++ P V+ LQ NGM F +++ Q G ALYKG
Sbjct: 61 LCSSWTIRCMLYPMSVVKSRLQLQRQNNVYNGMRDAFVKIIRQEGIGALYKG 112
>U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical
protein B0432.4 protein.
Length = 306
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 121 GMXAVFKQLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 261
G+ ++ ++ G L++G TP ++RA NAA + A + L
Sbjct: 149 GVVNALTRITKEEGVLTLWRGCTPTVLRAMVVNAAQLATYSQAKQAL 195
>Z68316-6|CAA92682.2| 357|Caenorhabditis elegans Hypothetical
protein K08E4.5 protein.
Length = 357
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -2
Query: 420 LCLSAAMYYSILNNNVCDIIGLF---YYNLTPTTLHFSIIFSYYYFTLSKVW 274
LC A+ ++ + +I + YY + +HFS F YY+ +K W
Sbjct: 221 LCTVCALKLKMITKEISTVISINSVNYYLFWISIIHFSTSFWYYFSVETKQW 272
>Z49070-1|CAA88869.1| 384|Caenorhabditis elegans Hypothetical
protein T09F3.2 protein.
Length = 384
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 142 QLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKF 258
Q+++ G ALYKG+ P ++ P+ A F + + +F
Sbjct: 154 QVIKTEGIGALYKGLIPNLVGVAPSKAVYFYTYSTSKRF 192
>X76116-1|CAA53722.1| 384|Caenorhabditis elegans carrier protein
(c2) protein.
Length = 384
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 142 QLMEQXGPTALYKGVTPVMIRAFPANAACFVGFEMAVKF 258
Q+++ G ALYKG+ P ++ P+ A F + + +F
Sbjct: 154 QVIKTEGIGALYKGLIPNLVGVAPSKAVYFYTYSTSKRF 192
>AF016675-4|AAB66137.1| 356|Caenorhabditis elegans Hypothetical
protein T27B7.5 protein.
Length = 356
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 375 VCDIIGLFYYNLTPTTLHFSIIFSYY 298
V +GLFY+ L P LHF I ++
Sbjct: 18 VYQCLGLFYFFLYPPVLHFLISLDFF 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,259,859
Number of Sequences: 27780
Number of extensions: 256164
Number of successful extensions: 594
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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