Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_A06
(757 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006661-2|AAK31542.1| 253|Caenorhabditis elegans Spliceosome-a... 39 0.003
Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical pr... 36 0.023
AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical... 36 0.023
Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical pr... 35 0.054
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 35 0.072
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 35 0.072
U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical pr... 34 0.13
U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 32 0.51
AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 prote... 31 0.67
AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal prote... 31 0.67
AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protei... 31 0.67
Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical pr... 31 1.2
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF016439-5|AAB65900.1| 630|Caenorhabditis elegans Hypothetical ... 31 1.2
Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.5
AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 30 1.5
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 29 2.7
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical pr... 29 3.6
U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like ... 29 3.6
U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like ... 29 3.6
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 29 3.6
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 29 3.6
AL021491-4|CAA16374.2| 324|Caenorhabditis elegans Hypothetical ... 29 3.6
AF097737-1|AAD16170.1| 982|Caenorhabditis elegans hunchback-rel... 29 3.6
U97009-9|AAC69027.1| 225|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical p... 28 6.2
Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z79596-5|CAB01858.3| 369|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF003150-5|AAB54213.1| 474|Caenorhabditis elegans Hypothetical ... 28 8.2
>AC006661-2|AAK31542.1| 253|Caenorhabditis elegans
Spliceosome-associated proteinprotein 1 protein.
Length = 253
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/109 (23%), Positives = 52/109 (47%)
Frame = +1
Query: 394 QIAASVYSNEKVFPIALNFRDIDFSSNDQSDQFTVPGYSGLTESLIESLNISSNDIRFTP 573
++ +++ F ++N R+I N + + V G+T + ++++ NDIR
Sbjct: 3 RLTTELFAERPQFVNSVNMREI----NLRGQKIPVIENMGVTRDQFDVIDLTDNDIRKLD 58
Query: 574 ILTPMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNILEIQTIE 720
+L +L + NN ++ +LP+L + L+ NNI E+ IE
Sbjct: 59 NFPTFSRLNTLYLHNNRINYIAPDIATKLPNLKTLALTNNNICELGDIE 107
>Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical
protein M88.6b protein.
Length = 594
Score = 36.3 bits (80), Expect = 0.023
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +1
Query: 529 IESLNISSNDIRFTPILTPMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNILEI 708
IE L+ S TP L ++KLV+L +S+N LS+ + + + S +D +V + +E
Sbjct: 355 IEELSSHSPSQVRTPFLASLKKLVTLQLSSNNLSVIRSDELPKSLSSLALDHNVISKIEA 414
Query: 709 QTIEGQHPYTSLRHXN 756
+ +EG H N
Sbjct: 415 RALEGMEIKRLYLHSN 430
>AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical
protein T05H4.3 protein.
Length = 1152
Score = 36.3 bits (80), Expect = 0.023
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +1
Query: 433 PIALNFRDIDFSSNDQSDQFTVPGYSGLTESLIESLNISSNDIRFTPILTPMEKLVSLNM 612
P+ L ++I+ S N S +F + L +ES+++S+N I+ T I P++ L SLN+
Sbjct: 927 PLLLKLKNINLSQNALS-RFDCSLFD-LPN--LESVDLSNNSIK-TIIRRPLKTLTSLNL 981
Query: 613 SNNFL-SIAQLSNVHELPSLADIDLSVNNILEIQTIE 720
NN L ++ LS P+L +D+S N + +++
Sbjct: 982 QNNKLTTLTPLS----CPNLVSLDISNNKLASCASLK 1014
>Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical
protein M88.6a protein.
Length = 610
Score = 35.1 bits (77), Expect = 0.054
Identities = 21/70 (30%), Positives = 38/70 (54%)
Frame = +1
Query: 547 SSNDIRFTPILTPMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNILEIQTIEGQ 726
S + +R TP L ++KLV+L +S+N LS+ + + + S +D +V + +E + +EG
Sbjct: 378 SPSQVR-TPFLASLKKLVTLQLSSNNLSVIRSDELPKSLSSLALDHNVISKIEARALEGM 436
Query: 727 HPYTSLRHXN 756
H N
Sbjct: 437 EIKRLYLHSN 446
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 34.7 bits (76), Expect = 0.072
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +1
Query: 514 LTESLIESLNISSN---DIRFTPILTPMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDL 684
L++ ++ L++S N DI L +EKL +LN++NN L + N LP+L +DL
Sbjct: 210 LSQKELKHLDVSENLIGDIE-EGALYGLEKLETLNLTNNQL-VRLPGNTWSLPALKTLDL 267
Query: 685 SVNNILEIQT 714
S N + ++T
Sbjct: 268 SSNLFVSLET 277
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 34.7 bits (76), Expect = 0.072
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +1
Query: 514 LTESLIESLNISSN---DIRFTPILTPMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDL 684
L++ ++ L++S N DI L +EKL +LN++NN L + N LP+L +DL
Sbjct: 210 LSQKELKHLDVSENLIGDIE-EGALYGLEKLETLNLTNNQL-VRLPGNTWSLPALKTLDL 267
Query: 685 SVNNILEIQT 714
S N + ++T
Sbjct: 268 SSNLFVSLET 277
>U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical
protein K03A1.2b protein.
Length = 584
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 529 IESLNISSNDIRFTP--ILTPMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNIL 702
+E L++ + +I P I + KLV L++ N L H L SL DIDLSV N+
Sbjct: 303 LEELSLDNCNIENLPADIFEYLPKLVKLSLRENPLEEIPAVVAH-LKSLKDIDLSVTNLT 361
Query: 703 EIQ 711
EI+
Sbjct: 362 EIR 364
>U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical
protein K03A1.2a protein.
Length = 586
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 529 IESLNISSNDIRFTP--ILTPMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNIL 702
+E L++ + +I P I + KLV L++ N L H L SL DIDLSV N+
Sbjct: 303 LEELSLDNCNIENLPADIFEYLPKLVKLSLRENPLEEIPAVVAH-LKSLKDIDLSVTNLT 361
Query: 703 EIQ 711
EI+
Sbjct: 362 EIR 364
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 601 SLNMSNNFLSIAQLSNVHELPSLADIDLSVNNILEIQ 711
+L SNN L+ SN LP+L +DLS N+I +I+
Sbjct: 48 NLYFSNNLLNSLSKSNFQALPNLQYLDLSNNSIRDIE 84
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 601 SLNMSNNFLSIAQLSNVHELPSLADIDLSVNNILEIQ 711
+L SNN L+ SN LP+L +DLS N+I +I+
Sbjct: 48 NLYFSNNLLNSLSKSNFQALPNLQYLDLSNNSIRDIE 84
>AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 protein
protein.
Length = 679
Score = 31.5 bits (68), Expect = 0.67
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +1
Query: 424 KVFPIAL-NFRDIDFSSNDQSDQFTVPGYSGLTESLIESLNISSNDIRFTP-ILTPMEKL 597
+ P+++ R ++ Q++ +P G SL E + N + P ++ L
Sbjct: 164 RTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLRE-FYVDINSLTSLPDSISGCRML 222
Query: 598 VSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNILEIQTIEGQ 726
L++S N + I N+ +P+L D+++S+N I+E+ + G+
Sbjct: 223 DQLDVSENQI-IRLPENLGRMPNLTDLNISINEIIELPSSFGE 264
>AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal protein
413, isoform a protein.
Length = 679
Score = 31.5 bits (68), Expect = 0.67
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +1
Query: 424 KVFPIAL-NFRDIDFSSNDQSDQFTVPGYSGLTESLIESLNISSNDIRFTP-ILTPMEKL 597
+ P+++ R ++ Q++ +P G SL E + N + P ++ L
Sbjct: 164 RTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLRE-FYVDINSLTSLPDSISGCRML 222
Query: 598 VSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNILEIQTIEGQ 726
L++S N + I N+ +P+L D+++S+N I+E+ + G+
Sbjct: 223 DQLDVSENQI-IRLPENLGRMPNLTDLNISINEIIELPSSFGE 264
>AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protein
413, isoform b protein.
Length = 699
Score = 31.5 bits (68), Expect = 0.67
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +1
Query: 424 KVFPIAL-NFRDIDFSSNDQSDQFTVPGYSGLTESLIESLNISSNDIRFTP-ILTPMEKL 597
+ P+++ R ++ Q++ +P G SL E + N + P ++ L
Sbjct: 164 RTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLRE-FYVDINSLTSLPDSISGCRML 222
Query: 598 VSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNILEIQTIEGQ 726
L++S N + I N+ +P+L D+++S+N I+E+ + G+
Sbjct: 223 DQLDVSENQI-IRLPENLGRMPNLTDLNISINEIIELPSSFGE 264
>Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical
protein C44H4.1 protein.
Length = 586
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = +1
Query: 463 FSSNDQSDQFTVPGYSGLTESLIESLNISSNDIRFTPI--LTPMEKLVSLNMSNNFLSIA 636
F N+ F ++G E+ +E L I N I P ++ +++L L++ +N +
Sbjct: 88 FLRNNGLRSFHPNTFTGNLENSLEELEIRGNYIDGIPQSGVSILKQLKILSLPDNLIEYV 147
Query: 637 Q---LSNVHELPSLADIDLSVNNILEI 708
Q + H SL +DLS NN+ I
Sbjct: 148 QDNAFLSYHSRDSLLKLDLSANNLTAI 174
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 529 IESLNISSNDIRFTPILTPMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNI 699
+ESL + +N + P L ++KL L + NN + ++ +LP L + L+ N +
Sbjct: 370 LESLFLQNNQLAHFPSLFRLDKLRHLMLDNNQIQKIDNFSLADLPKLQHLSLAGNQL 426
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +1
Query: 529 IESLNISSNDIRFTPILT--PMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNIL 702
++ L +S N+IR +T + L L++S+N + S +++LP+L + L NN+
Sbjct: 466 LQQLRLSHNNIRTITSMTFSNLRNLRYLDLSHNRIIKILPSALYQLPALDVLHLDHNNLN 525
Query: 703 EI 708
EI
Sbjct: 526 EI 527
Score = 29.1 bits (62), Expect = 3.6
Identities = 31/141 (21%), Positives = 68/141 (48%)
Frame = +1
Query: 334 VDSFYNTNYYNRNSPTNCVNQIAASVYSNEKVFPIALNFRDIDFSSNDQSDQFTVPGYSG 513
VDS T++ N + + N++ + + F L+ + +D S+N + ++ +
Sbjct: 717 VDSSQLTSFGNLSILSFANNKVDSI---EDGAFENLLSLKILDLSNNPVTS-WSPTAFRD 772
Query: 514 LTESLIESLNISSNDIRFTPILTPMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVN 693
L+ S I S+N+++ + P + + SLN+S N + ++ L + +D+S N
Sbjct: 773 LSHS-ISSINMANTGLFSMPKFSH-RSIQSLNISCNKIYELSEKDLAPLTKVVALDISHN 830
Query: 694 NILEIQTIEGQHPYTSLRHXN 756
N+ +I ++ + P L+ N
Sbjct: 831 NLKQISSMAFE-PLIHLKQLN 850
>AF016439-5|AAB65900.1| 630|Caenorhabditis elegans Hypothetical
protein R02F11.4 protein.
Length = 630
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = +1
Query: 529 IESLNISSNDIRFTPILTPMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNILEI 708
++ L++S+N I P+ ++ L LN+S NFL+ ++ ++ + +L I L+ N I ++
Sbjct: 144 LKILDLSNNLIE-PPVSFSLKNLEILNLSGNFLN--EIPDLSKCVALQTISLADNKISDL 200
Query: 709 QTI 717
TI
Sbjct: 201 TTI 203
>Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical
protein C44H4.3 protein.
Length = 680
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +1
Query: 583 PMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNILEIQ 711
P ++VSL+ +NN + +LS H LP+L +DL+ N I+ +Q
Sbjct: 348 PFLRMVSLS-NNNIREVHELSFDH-LPNLHTLDLANNKIMSLQ 388
>AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein
protein.
Length = 680
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +1
Query: 583 PMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNILEIQ 711
P ++VSL+ +NN + +LS H LP+L +DL+ N I+ +Q
Sbjct: 348 PFLRMVSLS-NNNIREVHELSFDH-LPNLHTLDLANNKIMSLQ 388
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 29.5 bits (63), Expect = 2.7
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = +1
Query: 406 SVYSNE-KVFPIALNFRDIDFSSNDQSDQFT-VP--GYSGLTESLIESLNISSNDI-RFT 570
++ NE K P+ N + S N S+Q + +P ++GL S + L + +N I F
Sbjct: 110 TINGNELKTVPVFGNLSTL-MSMNLNSNQISSIPDKAFNGL--SALTQLRLENNAICDFP 166
Query: 571 PILTPMEK--LVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNILEIQTIE 720
P K LV L++S N L + +L +DL NNI EI E
Sbjct: 167 PKSLDAVKASLVLLDVSGNCLDAIPAQILRNAANLMYLDLGSNNISEINNFE 218
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 529 IESLNISSNDIRFTPILTPMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNILEI 708
+E L++S+N + P L + L + + N ++ + P+L I + NNI++I
Sbjct: 273 LEVLDVSNNALYALPSLKDLPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQI 332
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 262 DENACKYNMVCLGKFSGYQRHYFSVDSFYNTNYYNRNSPTN 384
D++ C N +CL S RH F D FY + P N
Sbjct: 2225 DKSVCAKNAICLPTGSCICRHGFKGDPFYKCSSLVSKEPAN 2265
>Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical
protein C44H4.2 protein.
Length = 738
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Frame = +1
Query: 505 YSGLTESLIESLNISSNDIR------FTPILTPMEKLVSLNMSNNFLSIAQLSNVHELPS 666
+SGL I L++S N I+ F I +E++V +++N + + + LP+
Sbjct: 47 FSGL---FIRRLDLSQNKIKKIDDAAFAGINPVLEEVV---LNHNLIEKVPAAALAGLPN 100
Query: 667 LADIDLSVNNILEIQTIE 720
L +DLS N+I+EIQ E
Sbjct: 101 LLRLDLSNNSIVEIQEQE 118
>U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform b protein.
Length = 960
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 502 GYSGLTESLIESLNISSNDIRFTPILTPMEKLVS--LNMSNNFLSIAQLSNVHELPSLAD 675
G GL S++ L S+ D + M +S LN SN SIA L N LPS +
Sbjct: 700 GLMGLRNSVMSPLKCSACDFVASSADEKMRHSMSHILNSSNVPTSIASLYNSLNLPSFSH 759
Query: 676 IDLSVNNILE 705
+ +N LE
Sbjct: 760 VAPDNDNALE 769
>U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform a protein.
Length = 982
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 502 GYSGLTESLIESLNISSNDIRFTPILTPMEKLVS--LNMSNNFLSIAQLSNVHELPSLAD 675
G GL S++ L S+ D + M +S LN SN SIA L N LPS +
Sbjct: 722 GLMGLRNSVMSPLKCSACDFVASSADEKMRHSMSHILNSSNVPTSIASLYNSLNLPSFSH 781
Query: 676 IDLSVNNILE 705
+ +N LE
Sbjct: 782 VAPDNDNALE 791
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 445 NFRDIDFSSNDQSDQFTVPGYSGLTESLIESLNISSNDI-RFTPILTPMEKLVSLNMSNN 621
N RD+DFS N+ VP +L LN+S N I + E L +LNMS+N
Sbjct: 223 NLRDVDFSENNLP---IVPEALFKLRNL-RKLNLSGNKIEKLNMTEGEWENLETLNMSHN 278
Query: 622 FLSI 633
L++
Sbjct: 279 QLTV 282
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 445 NFRDIDFSSNDQSDQFTVPGYSGLTESLIESLNISSNDI-RFTPILTPMEKLVSLNMSNN 621
N RD+DFS N+ VP +L LN+S N I + E L +LNMS+N
Sbjct: 223 NLRDVDFSENNLP---IVPEALFKLRNL-RKLNLSGNKIEKLNMTEGEWENLETLNMSHN 278
Query: 622 FLSI 633
L++
Sbjct: 279 QLTV 282
>AL021491-4|CAA16374.2| 324|Caenorhabditis elegans Hypothetical
protein Y44A6B.2 protein.
Length = 324
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +1
Query: 433 PIALNFRDIDFSSNDQSDQFTVPGYSGLTESLIESLNISSNDIRFTPILTPMEKLVSLNM 612
P+ +N R++ F + + + LI + +S N I + + +
Sbjct: 143 PVNINQRNLSFQGDCHEEIHPITAIQNNYLILIPVITMSINAIVLLYLAAKRGEALRRRR 202
Query: 613 SNNFLSIAQLSNVHELPSLA 672
N +SI+ SNVH+LP LA
Sbjct: 203 LN-IVSISSTSNVHQLPPLA 221
>AF097737-1|AAD16170.1| 982|Caenorhabditis elegans
hunchback-related protein protein.
Length = 982
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 502 GYSGLTESLIESLNISSNDIRFTPILTPMEKLVS--LNMSNNFLSIAQLSNVHELPSLAD 675
G GL S++ L S+ D + M +S LN SN SIA L N LPS +
Sbjct: 722 GLMGLRNSVMSPLKCSACDFVASSADEKMRHSMSHILNSSNVPTSIASLYNSLNLPSFSH 781
Query: 676 IDLSVNNILE 705
+ +N LE
Sbjct: 782 VAPDNDNALE 791
>U97009-9|AAC69027.1| 225|Caenorhabditis elegans Hypothetical
protein T19H12.2 protein.
Length = 225
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +1
Query: 541 NISSNDIRFTPILTPMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNIL 702
N +D F ++ ++ + +S N L++ + + LP+L ++DLS N+ L
Sbjct: 70 NELGDDASFDVLIKCAPEIKKITLSGNRLTLDNVRTLKMLPNLMELDLSNNSSL 123
>Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical
protein T23G11.6a protein.
Length = 653
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 586 MEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNILEIQT 714
+E L L+++ NF+S + L SL ++DL N I I T
Sbjct: 303 LESLTRLSLAGNFISKLEPDVFFGLSSLEELDLGWNEIKTIPT 345
>Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical
protein T23G11.6b protein.
Length = 616
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 586 MEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNILEIQT 714
+E L L+++ NF+S + L SL ++DL N I I T
Sbjct: 303 LESLTRLSLAGNFISKLEPDVFFGLSSLEELDLGWNEIKTIPT 345
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical
protein F43C1.1 protein.
Length = 1036
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 529 IESLNISSNDIRFTPILTPME--KLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNI 699
+ LNISSN I P +L L +NN+L+ + + + L IDLS N +
Sbjct: 488 LRQLNISSNFIELLPYFDGSSFCRLQILRCANNYLTENSVPVIVNMKHLKIIDLSHNRL 546
>Z79596-5|CAB01858.3| 369|Caenorhabditis elegans Hypothetical
protein C02C6.3a protein.
Length = 369
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 556 DIRFTPIL--TPMEKLVSLNMSNNFLSIAQLSNVHELPSLADIDLSVNNIL 702
D+ TP+ L+ LN+S N++ + + +P+L +D+S N I+
Sbjct: 109 DLTSTPLFGADSQTSLIKLNLSANYIVNLNSNALRNMPNLQVLDISNNEIV 159
>AF003150-5|AAB54213.1| 474|Caenorhabditis elegans Hypothetical
protein T05E7.1 protein.
Length = 474
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1
Query: 751 NVSNLCTDVDLRWFEFPICY*RINRYRQAKVAREHLKVAQLTKSYLT 611
++ L DVD+ +FE PI Y + + Y K+ LT +YL+
Sbjct: 228 DLPKLIPDVDIEFFEKPIEYVQNSPYCSGKIGLVGQSFGGLTANYLS 274
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,153,872
Number of Sequences: 27780
Number of extensions: 293305
Number of successful extensions: 829
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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