Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_A05
(738 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0701 - 10523053-10523220,10523802-10523916,10524102-105241... 152 2e-37
01_05_0451 - 22361617-22361811,22362728-22362842,22363443-223635... 65 6e-11
02_02_0236 + 8135641-8135795,8136167-8136557,8136640-8136931,813... 52 4e-07
06_03_0968 - 26402154-26403834,26404322-26404383,26404473-264046... 46 3e-05
08_02_1014 - 23586552-23587224,23587402-23587463,23587735-235879... 45 7e-05
01_06_1840 - 40250285-40251022,40251121-40251283,40251523-40251731 39 0.005
07_03_0378 + 17446311-17446514,17446814-17446927,17447124-174472... 38 0.006
04_03_0710 - 18916593-18917372,18917467-18917629,18917715-18917959 34 0.14
02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942 33 0.18
11_03_0135 - 10547460-10547558,10547926-10548086,10548183-105483... 30 2.2
09_02_0119 - 4481522-4481580,4481615-4481718,4483132-4483231,448... 29 3.9
03_06_0096 - 31627332-31627570,31628467-31628743,31628963-316291... 29 5.1
03_05_0841 - 28104977-28105142,28105439-28105502,28105586-281056... 29 5.1
01_03_0076 - 12241408-12241545,12241719-12241790,12242173-122422... 29 5.1
12_01_0751 - 6759380-6759686,6759770-6759859,6759964-6760211,676... 28 6.7
01_05_0319 - 20871781-20871909,20872001-20872053,20873271-20873598 28 6.7
>03_02_0701 -
10523053-10523220,10523802-10523916,10524102-10524172,
10524263-10524420,10524497-10524590,10524678-10524766,
10525322-10525419,10525492-10525625,10525714-10525797,
10525903-10526151
Length = 419
Score = 152 bits (369), Expect = 2e-37
Identities = 82/213 (38%), Positives = 115/213 (53%), Gaps = 14/213 (6%)
Frame = +1
Query: 139 EPRKVDIGVLEE-KPSWLLHPRFFPSKIGGKPSWLNLQDLPKSSELLCKKCQDPTVFLCQ 315
E +V +G LE+ K LL FPSK GG P+WL+ +LP + C C +P F+ Q
Sbjct: 52 EEAEVTLGFLEKPKHPGLLLRHLFPSKAGGIPAWLDPVNLPSGNSRCCGFCGEPLQFVLQ 111
Query: 316 VYAPFEDVEDCFHRTIFIFICKNGNCCSKNNTDNF-----------IVLRCQLPRTNDFY 462
+YAP ED FHRT+F+F+C + C ++ D + V RCQLPR+N FY
Sbjct: 112 IYAPIEDNAASFHRTLFMFMCPSMACLLRDQHDQWKHRQGNPCRSVKVFRCQLPRSNAFY 171
Query: 463 SYQPYEEKDEEFPMDNWTKLCDVCGA-RGPAHCSRCKKMYYCSRKHQIIDWQKGHKEQCP 639
S +P + D + P+ +C CG +G CS CKK YCS KHQ + W+ GHK C
Sbjct: 172 SSEPPKHNDSDKPLCPGAPVCHWCGTWKGDKLCSSCKKARYCSEKHQTLHWRSGHKSDCL 231
Query: 640 QLQSGDIVSTNNF-KITKAGQSVLFKEWELIVD 735
QL S S++ F + K S + E+E+ +D
Sbjct: 232 QLISSSEASSSIFPAVGKVPASKSWPEYEIAID 264
>01_05_0451 -
22361617-22361811,22362728-22362842,22363443-22363513,
22363600-22363754,22363843-22363933,22364049-22364104,
22364910-22365027,22365087-22365200,22365289-22365504
Length = 376
Score = 64.9 bits (151), Expect = 6e-11
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 14/100 (14%)
Frame = +1
Query: 136 MEPRKVDIGVLEEKPS---W-LLHPRFFPSKIGGKPSWLNLQDLPKSSELLCKKCQDPTV 303
M+P+ V +G +EE W LL P+ FP+K GG P+WL+ +LP C C +P
Sbjct: 38 MDPQ-VTLGFIEEPEGPEDWHLLLPQHFPNKAGGVPAWLDPVNLPSGKSRCCDFCGEPLR 96
Query: 304 FL----------CQVYAPFEDVEDCFHRTIFIFICKNGNC 393
F+ QVYAP + E +HRT+F+F+C + C
Sbjct: 97 FVLQVVFHLYDKLQVYAPIQCKETAYHRTLFVFMCPSMAC 136
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +1
Query: 544 GPAHCSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTNNFKITKAGQSVLFKEWE 723
G CSRC+K YCS+KHQ + W+ HK +C Q+ S K ++ E+
Sbjct: 150 GEKVCSRCRKSSYCSKKHQELHWRAKHKNECHQISGSHNASAIMPDAGKVFAGNIWPEY- 208
Query: 724 LIVDE 738
++VDE
Sbjct: 209 MVVDE 213
>02_02_0236 +
8135641-8135795,8136167-8136557,8136640-8136931,
8137117-8137271,8137363-8137451,8137623-8137967,
8139046-8139169,8139424-8139581,8139673-8139757,
8140094-8140306,8141314-8141375,8141466-8141951,
8142472-8142568
Length = 883
Score = 52.4 bits (120), Expect = 4e-07
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +1
Query: 523 CDVCGARGPAHCSRCKKMYYCSRKHQIIDWQKGHKEQCPQ 642
C C CSRCK + YCS K QII W++GHK+ C Q
Sbjct: 32 CATCHGPAKTRCSRCKSVRYCSGKCQIIHWRQGHKQTCQQ 71
>06_03_0968 -
26402154-26403834,26404322-26404383,26404473-26404682,
26404776-26404860,26405461-26405618,26405745-26405868,
26405955-26406123,26406202-26406287,26406379-26406467,
26406564-26406735,26407820-26408193
Length = 1069
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 523 CDVCGARGPAHCSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQ 648
C CG CS CK++ YCS+ Q WQ GHK +C Q++
Sbjct: 105 CAACGYIATKKCSGCKRVRYCSQGCQSKHWQSGHKFKCKQMK 146
>08_02_1014 -
23586552-23587224,23587402-23587463,23587735-23587950,
23588125-23588209,23589232-23589389,23589505-23589625,
23590081-23590243,23590330-23590415,23590660-23590742,
23590816-23591677,23593266-23593693
Length = 978
Score = 44.8 bits (101), Expect = 7e-05
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 520 LCDVCGARGPAHCSRCKKMYYCSRKHQIIDWQKGHKEQC 636
+C VC C +CK + YCS K QI W++GHK +C
Sbjct: 122 VCAVCFRPTTFRCKQCKAVKYCSFKCQIAHWRQGHKNEC 160
>01_06_1840 - 40250285-40251022,40251121-40251283,40251523-40251731
Length = 369
Score = 38.7 bits (86), Expect = 0.005
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 556 CSRCKKMYYCSRKHQIIDWQKGHKEQC 636
CS C YCSR Q +DW++ HK QC
Sbjct: 329 CSVCGAANYCSRACQALDWKRAHKAQC 355
>07_03_0378 +
17446311-17446514,17446814-17446927,17447124-17447242,
17447595-17447641,17447720-17447820,17450769-17450840,
17451290-17451403,17451495-17451500,17451501-17451611
Length = 295
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 520 LCDVCGARGPAHCSRCKKMYYCSRKHQIIDWQKGHKEQCPQL 645
+ + C C C + YCSR HQ + W HKE+C +L
Sbjct: 42 VAEPCAGEARRRCGGCGAVAYCSRAHQTVHW-GFHKEECARL 82
>04_03_0710 - 18916593-18917372,18917467-18917629,18917715-18917959
Length = 395
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 556 CSRCKKMYYCSRKHQIIDWQKGHKEQC 636
CS C + YCSR Q + W+ HK +C
Sbjct: 342 CSVCGVVNYCSRACQALHWKTAHKAEC 368
>02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942
Length = 379
Score = 33.5 bits (73), Expect = 0.18
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 556 CSRCKKMYYCSRKHQIIDWQKGHKEQC 636
CS C + YCSR Q + W+ HK C
Sbjct: 322 CSVCSGVIYCSRACQAMHWKVAHKSAC 348
>11_03_0135 -
10547460-10547558,10547926-10548086,10548183-10548306,
10548566-10548729,10549803-10549883,10549973-10550097,
10550200-10550430,10550566-10550588,10551055-10551539,
10551678-10552075,10552903-10552988,10553120-10553397,
10553494-10553714,10553927-10554018,10554148-10554213,
10555855-10556022
Length = 933
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 7/46 (15%)
Frame = +1
Query: 475 YEEKDEEFPMDNWTKLCDVCGARGP----AHCSRCK---KMYYCSR 591
Y + E D K+CD+CG G A CSRC + YC R
Sbjct: 68 YVDSSSEESEDQQVKICDICGDVGEEKKLAICSRCNDGAEHIYCMR 113
>09_02_0119 -
4481522-4481580,4481615-4481718,4483132-4483231,
4483307-4483404,4483688-4483828,4485736-4485788,
4486578-4486649,4487730-4487801,4487895-4487987,
4489040-4489107,4489268-4489358
Length = 316
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 284 FLHKS-SLDFGRSCRLSQDGFPPILLGKNLGCKSQLGFSSKT 162
FL KS +L+ R C + IL G+N GCK+ L S K+
Sbjct: 259 FLLKSFNLETSRMCMVGDRLDTDILFGQNTGCKTLLVLSEKS 300
>03_06_0096 -
31627332-31627570,31628467-31628743,31628963-31629118,
31629205-31629381,31629543-31629745,31630680-31630995
Length = 455
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 430 RCQLPRTNDFYSYQPYEEKDEEFPMDNWTKL-CDVCGARGPAHCSRCKKMY 579
R ++ R N F YQ E++E F M T L C G S K Y
Sbjct: 150 RTEISRFNSFTGYQTLNEREESFKMKELTTLHCGFYNENGGFKVSDVDKDY 200
>03_05_0841 -
28104977-28105142,28105439-28105502,28105586-28105655,
28105743-28105852,28106217-28106295,28106610-28106691,
28106791-28106879,28107351-28107425,28107728-28107862,
28108018-28108163,28108380-28108491
Length = 375
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 523 CDVCGA-RGPAHCSRCKKMYYCSRKHQIIDWQKGHKEQC 636
CD C A R CS C+ +YC Q +W K H+ +C
Sbjct: 60 CDNCFASRNLRKCSVCRVAWYCGSACQREEW-KLHQLEC 97
>01_03_0076 -
12241408-12241545,12241719-12241790,12242173-12242289,
12243307-12245127,12245361-12245810
Length = 865
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Frame = +1
Query: 523 CDVCGARGPAHCSRCKKM------YYCSRKHQIIDWQKGHKEQCPQLQSGD 657
CDV G C CKKM + S KH ++ W + +QSG+
Sbjct: 200 CDVLIGSGQWQCVICKKMNGSEGEFVVSSKHDLLQWPELASSAIDYVQSGN 250
>12_01_0751 -
6759380-6759686,6759770-6759859,6759964-6760211,
6760268-6760328,6760504-6760523,6760695-6760818,
6760941-6760987,6761744-6761866
Length = 339
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +1
Query: 505 DNWTKLCDVCGARGPAHC--SRCKKMYYCSRKH 597
D W +C +C G C RC + ++ + KH
Sbjct: 40 DKWEDVCSICDDGGDFLCCEGRCLRSFHATEKH 72
>01_05_0319 - 20871781-20871909,20872001-20872053,20873271-20873598
Length = 169
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 344 IAFIELYLFSFVKMEIVAVKTTLITLLYYAVSFLERMISIPI 469
+ + L+LF + + + V+ L+ +LY A S L R +P+
Sbjct: 61 LLLLALFLFPLLALSLYYVRYVLVPVLYDASSMLSRYWYVPV 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,496,108
Number of Sequences: 37544
Number of extensions: 363128
Number of successful extensions: 822
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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