Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P17_F_A05
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32683-13|CAA83630.1| 386|Caenorhabditis elegans Hypothetical p... 144 6e-35
Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical pr... 38 0.007
AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical ... 38 0.007
AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical ... 38 0.007
AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical ... 38 0.007
AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein. 38 0.007
Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical pr... 38 0.010
AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical ... 37 0.017
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 34 0.091
Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative tran... 30 1.5
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 30 2.0
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 30 2.0
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81526-4|CAB04267.2| 430|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z70683-5|CAE46666.1| 134|Caenorhabditis elegans Hypothetical pr... 28 6.0
L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease pr... 28 6.0
AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein. 28 6.0
AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical ... 28 6.0
AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear recep... 28 6.0
AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear recep... 28 6.0
AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear recep... 28 6.0
AF101315-1|AAC69225.2| 369|Caenorhabditis elegans Hypothetical ... 28 6.0
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 28 6.0
Z69883-5|CAA93739.2| 260|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF016449-4|AAG23998.3| 330|Caenorhabditis elegans Serpentine re... 28 7.9
>Z32683-13|CAA83630.1| 386|Caenorhabditis elegans Hypothetical
protein R07E5.10a protein.
Length = 386
Score = 144 bits (349), Expect = 6e-35
Identities = 80/211 (37%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Frame = +1
Query: 139 EPRKVDIGV-LEEKPSWLLHPRFFP-SKIGGKPSWLNLQDLPKSSELLCKKCQDPTVFLC 312
EP + GV E + L +F P KIGGKPSWLN ++LPKS++LLC C+ P FL
Sbjct: 8 EPVNLGFGVQFEPDDLYRLRSQFLPLGKIGGKPSWLNPKNLPKSADLLCNVCEKPLCFLM 67
Query: 313 QVYAP--FEDVEDCFHRTIFIFICKNGNCCSKNNTDNFIVLRCQLPRTNDFYSYQ-PYEE 483
QV A D FHR++F+F+C+N +C N+ N RCQLPR ND+YS+ P +
Sbjct: 68 QVSANGGINDPPHAFHRSLFLFVCRNPSCSRTNDAANLKAFRCQLPRANDYYSFDGPMDP 127
Query: 484 ------KDEEFPMDNWTKLCDVCGARGPAHCSRCKKMYYCSRKHQIIDWQKGHKEQCPQL 645
D P D LC +CG C++C+ YCS+ HQ+IDW HK +C +
Sbjct: 128 DLDGDVADPRAPADG-PGLCRICGCSAAKKCAKCQVARYCSQAHQVIDW-PAHKLECAKA 185
Query: 646 QSGDIVSTNNFKITKAGQSVLFKEWELIVDE 738
+ + T+ K + + FKE+ + +D+
Sbjct: 186 ATDGSI-TDEPKNPR--NAFCFKEFGVEIDQ 213
>Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 523 CDVCGARGPAH----CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 672
C CG+ + C C + YCS++HQ +DW HK C LQ+ +V +N
Sbjct: 39 CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91
>Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 523 CDVCGARGPAH----CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 672
C CG+ + C C + YCS++HQ +DW HK C LQ+ +V +N
Sbjct: 39 CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91
>Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 523 CDVCGARGPAH----CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 672
C CG+ + C C + YCS++HQ +DW HK C LQ+ +V +N
Sbjct: 39 CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91
>AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 523 CDVCGARGPAH----CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 672
C CG+ + C C + YCS++HQ +DW HK C LQ+ +V +N
Sbjct: 39 CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91
>AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 523 CDVCGARGPAH----CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 672
C CG+ + C C + YCS++HQ +DW HK C LQ+ +V +N
Sbjct: 39 CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91
>AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 523 CDVCGARGPAH----CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 672
C CG+ + C C + YCS++HQ +DW HK C LQ+ +V +N
Sbjct: 39 CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91
>AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein.
Length = 723
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 523 CDVCGARGPAH----CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTN 672
C CG+ + C C + YCS++HQ +DW HK C LQ+ +V +N
Sbjct: 39 CTYCGSSCTSSQLQTCLFCGTVAYCSKEHQQLDWLT-HKMICKSLQTSGMVPSN 91
>Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical
protein R06F6.4 protein.
Length = 429
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/43 (32%), Positives = 29/43 (67%)
Frame = +1
Query: 556 CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVSTNNFKI 684
CS C+++ YCS++ Q DW K HK +C +++ + V+ ++ ++
Sbjct: 39 CSACRRLAYCSQECQRADW-KLHKVECKAIKTHNEVANDSIRL 80
>AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical
protein Y48G1A.3 protein.
Length = 388
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 517 KLCDVCGARGPA-HCSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQSGDIVS 666
+ C VCG G C++CK + YCS++ Q DW HK+ C L++ VS
Sbjct: 319 QFCSVCGHPGAKKRCTQCK-LAYCSQECQKFDWPI-HKKVCSFLKTRQEVS 367
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 34.3 bits (75), Expect = 0.091
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 556 CSRCKKMYYCSRKHQIIDWQK-GHKEQCPQLQSGDIV 663
C C YCS++ Q+ +W GH+E+C + + + V
Sbjct: 729 CEECYDAVYCSKECQVANWSTGGHREECSKRKPSETV 765
>Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical
protein Y53C12B.5a protein.
Length = 290
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 526 DVCGARGPAHCSRCKKMYYCSR--KHQIIDWQKGHKEQCPQLQ 648
++C A+ + +K YYC R H + +KGHK C L+
Sbjct: 9 EICEAKAVDELAEQEKNYYCQRCLNHGELKPRKGHKPDCRYLK 51
>AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative
transcription factor MAB-3 protein.
Length = 290
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 526 DVCGARGPAHCSRCKKMYYCSR--KHQIIDWQKGHKEQCPQLQ 648
++C A+ + +K YYC R H + +KGHK C L+
Sbjct: 9 EICEAKAVDELAEQEKNYYCQRCLNHGELKPRKGHKPDCRYLK 51
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/77 (29%), Positives = 31/77 (40%)
Frame = +1
Query: 451 NDFYSYQPYEEKDEEFPMDNWTKLCDVCGARGPAHCSRCKKMYYCSRKHQIIDWQKGHKE 630
NDF S + E+ W KL D + P SRC + + H + G
Sbjct: 17 NDF-SGDRFPHDVEQMTQMTWLKLNDSKLEQVPDELSRCANLEHLQMAHNQLISVHGELS 75
Query: 631 QCPQLQSGDIVSTNNFK 681
P+L+S IV NN K
Sbjct: 76 DLPRLRS-VIVRDNNLK 91
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/77 (29%), Positives = 31/77 (40%)
Frame = +1
Query: 451 NDFYSYQPYEEKDEEFPMDNWTKLCDVCGARGPAHCSRCKKMYYCSRKHQIIDWQKGHKE 630
NDF S + E+ W KL D + P SRC + + H + G
Sbjct: 17 NDF-SGDRFPHDVEQMTQMTWLKLNDSKLEQVPDELSRCANLEHLQMAHNQLISVHGELS 75
Query: 631 QCPQLQSGDIVSTNNFK 681
P+L+S IV NN K
Sbjct: 76 DLPRLRS-VIVRDNNLK 91
>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical
protein F54F11.2 protein.
Length = 1589
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = -1
Query: 423 NKVISVVFTATISIFTNENKYSSMKAIFYIFERSINLTQENCRILAFFT 277
+KV++V A +S T+ KY+S + + +F+ S+NL+ + C +T
Sbjct: 76 SKVLNVAQPAKVSPGTD--KYNSYQQVVQLFKASVNLSVDPCNDFYAYT 122
>Z81526-4|CAB04267.2| 430|Caenorhabditis elegans Hypothetical
protein F33H2.7 protein.
Length = 430
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 556 CSRCKKMYYCSRKHQIIDWQKGHKEQCPQLQ 648
C C + YC+ K Q DW+ H+ +C L+
Sbjct: 41 CDDCLAVSYCTLKCQRKDWKSCHQFECEILR 71
>Z70683-5|CAE46666.1| 134|Caenorhabditis elegans Hypothetical
protein F13B12.7 protein.
Length = 134
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 547 PAHCSRCKKMYYCSRKH--QIIDWQKGHKEQCPQLQSG 654
P +C CKKM+ CS++ II G K+ Q G
Sbjct: 61 PTYCEVCKKMFICSKRSLTGIIYTPDGRKKDSIDFQYG 98
>L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease
protein.
Length = 570
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 523 CDVCGARGPAHCSRCKKMY 579
C+ C A GP C +C K Y
Sbjct: 441 CETCTAPGPMSCEKCSKGY 459
>AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein.
Length = 474
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 259 KSSELLCKKCQDPTVFLCQVYAPFEDVEDCFHRTI---FIFICKNGNCC 396
KSS LC C D + L A E + F R++ ++ C NCC
Sbjct: 94 KSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCSQDNCC 142
>AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical
protein Y15E3A.1a protein.
Length = 474
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 259 KSSELLCKKCQDPTVFLCQVYAPFEDVEDCFHRTI---FIFICKNGNCC 396
KSS LC C D + L A E + F R++ ++ C NCC
Sbjct: 94 KSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCSQDNCC 142
>AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 476
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 259 KSSELLCKKCQDPTVFLCQVYAPFEDVEDCFHRTI---FIFICKNGNCC 396
KSS LC C D + L A E + F R++ ++ C NCC
Sbjct: 96 KSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCSQDNCC 144
>AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 259 KSSELLCKKCQDPTVFLCQVYAPFEDVEDCFHRTI---FIFICKNGNCC 396
KSS LC C D + L A E + F R++ ++ C NCC
Sbjct: 95 KSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCSQDNCC 143
>AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 259 KSSELLCKKCQDPTVFLCQVYAPFEDVEDCFHRTI---FIFICKNGNCC 396
KSS LC C D + L A E + F R++ ++ C NCC
Sbjct: 95 KSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCSQDNCC 143
>AF101315-1|AAC69225.2| 369|Caenorhabditis elegans Hypothetical
protein T22H9.4 protein.
Length = 369
Score = 28.3 bits (60), Expect = 6.0
Identities = 8/22 (36%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = +1
Query: 577 YYCSR--KHQIIDWQKGHKEQC 636
Y+C + H ++ W+K HK++C
Sbjct: 135 YFCQKCKNHNVLVWKKNHKKEC 156
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 523 CDVCGARGPAHCSRCKKMY 579
C+ C A GP C +C K Y
Sbjct: 813 CETCTAPGPMSCEKCSKGY 831
>Z69883-5|CAA93739.2| 260|Caenorhabditis elegans Hypothetical
protein C27C12.6 protein.
Length = 260
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 556 CSRCKKMYYCSRKHQIIDWQKGHKEQC 636
C+RC R H ++ W KGHK C
Sbjct: 22 CARC-------RNHGLVSWLKGHKRHC 41
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
R10E11.1b protein.
Length = 2056
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 259 KSSELLCKKCQDPTVFLCQVYAPFEDVEDC 348
K E C KC P V+ CQ F+ + C
Sbjct: 1493 KGMEYTCNKCSSPAVWHCQSCDDFDLCDGC 1522
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
R10E11.1a protein.
Length = 2045
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 259 KSSELLCKKCQDPTVFLCQVYAPFEDVEDC 348
K E C KC P V+ CQ F+ + C
Sbjct: 1482 KGMEYTCNKCSSPAVWHCQSCDDFDLCDGC 1511
>AF016449-4|AAG23998.3| 330|Caenorhabditis elegans Serpentine
receptor, class t protein16 protein.
Length = 330
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +2
Query: 500 QWTTGQNCVMYVVLEDLLIVQGVRK--CTTVVGNIKLLT 610
QW++G C++Y+ L + I Q V+K C+ V ++ L T
Sbjct: 292 QWSSGSVCIVYLTL-NKTIRQAVKKLLCSNVSNSVGLAT 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,520,141
Number of Sequences: 27780
Number of extensions: 377292
Number of successful extensions: 1109
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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