Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P17_F_A03
         (826 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    31   0.008
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   1.7  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   5.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   6.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.0  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 31.5 bits (68), Expect = 0.008
 Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
 Frame = +1

Query: 88  LFIVIHQYVAKMXQQKELGMKC--IKYMLLCITAIFVLTSALTISV--GTTIYAIYHDIS 255
           LF++I     K+  +++    C  +KY ++ I  + +LTS++T+ V   + +YA  H   
Sbjct: 17  LFLLICDSYLKIYHKEKYRKFCRILKYFIIAIYVLTILTSSVTLHVCFNSYMYAFTHIFF 76

Query: 256 FFLSPYAFSPAIFVIAIGVIMLF 324
           FF     F   I +I + ++ +F
Sbjct: 77  FFAICCDF---IALIVVNIVHVF 96


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 434 LPTVFAARSHNFWTKNLGKHFLYTTSMLRRR 526
           +  V+   ++NFW K     FL    +L+ R
Sbjct: 63  ISNVYQILAYNFWKKKYWSEFLANLKLLKGR 93


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +2

Query: 365 PAWSTFSQ*SLASCSFWRSPRPSLPTVFAARSHNFWTKNLGKHFLYTT 508
           P W      +L S S +  P   + T +A      W+KN  K F+  T
Sbjct: 178 PQWKWQVYMTLVSLSLFIIPASIIATCYAIIIITIWSKN-AKGFIKNT 224


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 188 KIAVIHNSMYLMHFI 144
           K+A  HNS+Y +H +
Sbjct: 242 KVAKDHNSLYSLHLL 256


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 472  DKKLREALPLYYQHAEAQDAFDFIQYELN 558
            DK+     PLYY   +  D F+   + LN
Sbjct: 2520 DKQTGHVAPLYYYPGDVYDYFN-ANFSLN 2547


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,316
Number of Sequences: 336
Number of extensions: 4226
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)