Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_P21
(630 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 160 9e-40
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 56 3e-08
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 56 3e-08
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical ... 30 1.6
U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated p... 29 3.6
AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein. 29 3.6
AC024775-3|AAK68454.1| 580|Caenorhabditis elegans Hypothetical ... 29 3.6
Z81030-8|CAB02716.1| 421|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 28 4.8
U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical p... 27 8.4
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (spastic
paraplegia)protein 7 protein.
Length = 782
Score = 160 bits (388), Expect = 9e-40
Identities = 74/116 (63%), Positives = 93/116 (80%)
Frame = -3
Query: 625 KVGNVSFEMPQPGEMVIDKPYSEKTAELIDSEVRDLINNAHKHTTDLLTKHKPNIEKVAE 446
KVG +SFE P PGEM DKPYSE TA+LID EVRDL+ NA + T DLL + + +IE+VA
Sbjct: 654 KVGPLSFETPAPGEMAFDKPYSEATAQLIDQEVRDLVMNALRRTRDLLLEKRSDIERVAL 713
Query: 445 RLLKQEILSRDDMIELLGPRPFPEKSTYEEFVEGTGSLDEDTTLPEGLKDWNKEKQ 278
RLL++EIL+R+DMIEL+G RPF EK+TYEE V GTG LDE+ LP+GL++WNKE +
Sbjct: 714 RLLEKEILNREDMIELVGKRPFVEKNTYEEMVSGTGGLDENVELPKGLENWNKESE 769
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/67 (37%), Positives = 43/67 (64%)
Frame = -3
Query: 571 KPYSEKTAELIDSEVRDLINNAHKHTTDLLTKHKPNIEKVAERLLKQEILSRDDMIELLG 392
KPYS+K A D E ++ A++ TTDL+ + +E +A+ LLK+E+L+ +D+ +L+G
Sbjct: 666 KPYSKKFASTFDQEATLIVAKANEATTDLIKNNMDKLETIAQALLKREVLNYEDVKKLIG 725
Query: 391 PRPFPEK 371
F +K
Sbjct: 726 TPKFGDK 732
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/67 (37%), Positives = 43/67 (64%)
Frame = -3
Query: 571 KPYSEKTAELIDSEVRDLINNAHKHTTDLLTKHKPNIEKVAERLLKQEILSRDDMIELLG 392
KPYS+K A D E ++ A++ TTDL+ + +E +A+ LLK+E+L+ +D+ +L+G
Sbjct: 666 KPYSKKFASTFDQEATLIVAKANEATTDLIKNNMDKLETIAQALLKREVLNYEDVKKLIG 725
Query: 391 PRPFPEK 371
F +K
Sbjct: 726 TPKFGDK 732
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = -3
Query: 556 KTAELIDSEVRDLINNAHKHTTDLLTKHKPNIEKVAERLLKQEILSRDDM 407
+TAELID+E+ ++ ++K +L K + +AE LL+ E LS D++
Sbjct: 584 QTAELIDAEINRVLQESYKRAKVILETKKKEHQLLAEALLEYETLSADEV 633
>AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical
protein T05E7.5 protein.
Length = 381
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = -3
Query: 550 AELIDSEVRDL---INNAHKHTTDLLTKHKPNIEKVAERLLKQE 428
A+ DSE+ L INN K DL +H+ ++EK+ ERL +++
Sbjct: 117 AKCHDSELNRLYTIINNLEKKVEDLNGEHQKSLEKLKERLHEKD 160
>U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated
protein 97 protein.
Length = 348
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 87 SKFQYFDLSTTTKICYENSNTQTKKPL--NLKGNFKYNSQ*LLLPG 218
+KF FD+ T K CY+ T+ KK + +LK N + + PG
Sbjct: 301 TKFYEFDMKPTCKRCYDRFPTELKKRISESLKDRDVENQRRSMSPG 346
>AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein.
Length = 348
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 87 SKFQYFDLSTTTKICYENSNTQTKKPL--NLKGNFKYNSQ*LLLPG 218
+KF FD+ T K CY+ T+ KK + +LK N + + PG
Sbjct: 301 TKFYEFDMKPTCKRCYDRFPTELKKRISESLKDRDVENQRRSMSPG 346
>AC024775-3|AAK68454.1| 580|Caenorhabditis elegans Hypothetical
protein Y41D4A.4 protein.
Length = 580
Score = 28.7 bits (61), Expect = 3.6
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 46 YTEMQGSILCNSHIQSSSILI-FRLQLKYVTKTVTRKQKSL*I-LKVILNIIHNNYYYRV 219
Y E G L ++ S + I FR K KTV ++K K +L I N+YYY++
Sbjct: 65 YHETMGESLLGVELEFSGLDIKFRTNTK---KTVVCEKKLTETDYKTLLYAIQNSYYYQM 121
Query: 220 LIFYW-LWGLMG 252
+ +WG++G
Sbjct: 122 YLDDMPIWGMVG 133
>Z81030-8|CAB02716.1| 421|Caenorhabditis elegans Hypothetical
protein C01G10.10 protein.
Length = 421
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 369 LFSGNGLGPNSSIISSRLKISCFSNLSATFSMLGLCFVNKSVVCLCALLIRSLTSESM 542
L G G+ N I + K+S N++ +L LC N ++ LL+ SE++
Sbjct: 300 LVIGGGVAANQYIFGAISKLSAAHNVTTIKVLLSLCTDNAEMIAYSGLLMLVNRSEAI 357
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 559 EKTAELIDSEVRDLINNAHKHTTDLLTKHKPNIEKVAERLLKQEI 425
E TA V++L + + H P I KV ER +KQEI
Sbjct: 308 ESTAHKYADRVKELEEMLARQGVQVPPSHLPPIPKVIERPIKQEI 352
>U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical
protein W02C12.3h protein.
Length = 361
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 559 EKTAELIDSEVRDLINNAHKHTTDLLTKHKPNIEKVAERLLKQEI 425
E TA V++L + + H P I KV ER +KQEI
Sbjct: 171 ESTAHKYADRVKELEEMLARQGVQVPPSHLPPIPKVIERPIKQEI 215
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 559 EKTAELIDSEVRDLINNAHKHTTDLLTKHKPNIEKVAERLLKQEI 425
E TA V++L + + H P I KV ER +KQEI
Sbjct: 308 ESTAHKYADRVKELEEMLARQGVQVPPSHLPPIPKVIERPIKQEI 352
>U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical
protein W02C12.3f protein.
Length = 473
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 559 EKTAELIDSEVRDLINNAHKHTTDLLTKHKPNIEKVAERLLKQEI 425
E TA V++L + + H P I KV ER +KQEI
Sbjct: 283 ESTAHKYADRVKELEEMLARQGVQVPPSHLPPIPKVIERPIKQEI 327
>U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical
protein W02C12.3d protein.
Length = 464
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 559 EKTAELIDSEVRDLINNAHKHTTDLLTKHKPNIEKVAERLLKQEI 425
E TA V++L + + H P I KV ER +KQEI
Sbjct: 274 ESTAHKYADRVKELEEMLARQGVQVPPSHLPPIPKVIERPIKQEI 318
>U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical
protein W02C12.3e protein.
Length = 439
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 559 EKTAELIDSEVRDLINNAHKHTTDLLTKHKPNIEKVAERLLKQEI 425
E TA V++L + + H P I KV ER +KQEI
Sbjct: 249 ESTAHKYADRVKELEEMLARQGVQVPPSHLPPIPKVIERPIKQEI 293
>U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical
protein W02C12.3c protein.
Length = 524
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 559 EKTAELIDSEVRDLINNAHKHTTDLLTKHKPNIEKVAERLLKQEI 425
E TA V++L + + H P I KV ER +KQEI
Sbjct: 334 ESTAHKYADRVKELEEMLARQGVQVPPSHLPPIPKVIERPIKQEI 378
>U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical
protein W02C12.3b protein.
Length = 499
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 559 EKTAELIDSEVRDLINNAHKHTTDLLTKHKPNIEKVAERLLKQEI 425
E TA V++L + + H P I KV ER +KQEI
Sbjct: 309 ESTAHKYADRVKELEEMLARQGVQVPPSHLPPIPKVIERPIKQEI 353
>Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical
protein R107.6 protein.
Length = 1020
Score = 27.5 bits (58), Expect = 8.4
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = -3
Query: 595 QPGEMVIDKPYSEKTAELIDSEVRDLINN--AHKHTTDLLTKHKPNIEKV---AERLLKQ 431
QPG P E +E++ + +N ++ + L + ++K A+ L+Q
Sbjct: 373 QPGSRNGSPPRRPSATEAFPAEMQRVKSNLGSNSFVSSLSAEEATKLQKAMNTAKESLRQ 432
Query: 430 EILSRDDMIELLGPRPFPEKSTYEEFVEGTGSLDE 326
+ DD LL RP P+K+T ++ T ++E
Sbjct: 433 PSRNDDDEF-LLPKRPTPQKATPQKSALDTSRVEE 466
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,618,248
Number of Sequences: 27780
Number of extensions: 264255
Number of successful extensions: 909
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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