Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_P15
(665 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1118 + 27756288-27756337,27756505-27756619,27756883-277570... 171 6e-43
02_04_0261 + 21363787-21363891,21364185-21364286,21365854-213659... 93 1e-19
01_06_0663 - 30991390-30992340 87 9e-18
01_05_0431 - 22084474-22084635,22084740-22084844,22084931-220850... 72 5e-13
05_07_0134 - 27911920-27912762 68 8e-12
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 59 3e-09
06_03_0219 - 18227559-18227858,18227864-18228340 35 0.067
02_01_0384 - 2781362-2782299,2782320-2782428 33 0.15
12_02_0842 - 23588826-23589198,23589548-23590203 32 0.36
03_02_0386 + 8009884-8010133,8010274-8010338,8010545-8010658,801... 31 0.82
07_01_0885 + 7353926-7354770,7354845-7355487 30 1.4
06_01_0080 + 644021-645463 29 3.3
07_01_0552 + 4109906-4109983,4110422-4110484,4110496-4110525,411... 28 5.8
02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530 28 5.8
10_02_0122 - 5517345-5517983 28 7.7
>06_03_1118 +
27756288-27756337,27756505-27756619,27756883-27757033,
27757219-27757301,27757424-27757519,27757615-27757757,
27757858-27757942,27758158-27758237,27758335-27758422
Length = 296
Score = 171 bits (415), Expect = 6e-43
Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 10/211 (4%)
Frame = -3
Query: 639 LXIDSSTIDPNVPKQIFP----IALEKGLGFT------DAPVSGGVMGAQNATLAFMAGG 490
L IDSST+DP ++I L++ + DAPVSGGV A+ L FM GG
Sbjct: 77 LYIDSSTVDPQTSRKISMDISRCTLKEKKAYAEKPMMLDAPVSGGVPAAEAGKLTFMVGG 136
Query: 489 RKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEP 310
+E + + PLL MG K +CG G+G VAK+ NNM M I+ + +E +G +G++
Sbjct: 137 SEEAYLAAKPLLLSMGKKTIYCGGAGNGSVAKICNNMAMAISMLGVSEAFALGQNLGIKA 196
Query: 309 KVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIR 130
VL D+ N SSAR WS++ Y PVPG++ PSSRNYDGGF ++LM KDL+LA A G+
Sbjct: 197 SVLTDIFNCSSARCWSSDTYNPVPGVMMDVPSSRNYDGGFTSKLMTKDLDLAMASASGVG 256
Query: 129 SPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 37
P G+ A ++YR + + G KDFS F+
Sbjct: 257 FNCPFGSQALEIYRKLCADGCELKDFSCAFR 287
>02_04_0261 +
21363787-21363891,21364185-21364286,21365854-21365964,
21366233-21366334,21366901-21367016,21367180-21367258,
21367347-21367517,21367617-21367712
Length = 293
Score = 93.5 bits (222), Expect = 1e-19
Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 2/185 (1%)
Frame = -3
Query: 576 EKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVA 397
+KG F +APVSG A++ L +A G K ++ +P V+G K F G+IG+G
Sbjct: 110 QKGGAFVEAPVSGSKKPAEDGQLVILAAGDKVLYDDMVPAFDVLGKKSFFLGEIGNGAKM 169
Query: 396 KLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAP 217
KL NM+MG A +E +++ GL P+ LLDVL+ + + P+ L +
Sbjct: 170 KLVVNMIMGSMMNALSEGLSLADNSGLSPQTLLDVLDLGAIAN-------PMFKLKGPSM 222
Query: 216 SSRNYDGGFKNELMVKDLELASGMALGIRSPI--PLGAVATQLYRIVQSRGYGQKDFSFV 43
+Y+ F + KD+ LA +ALG + + P+ A + + ++ +S G G DFS V
Sbjct: 223 LQGSYNPAFPLKHQQKDMRLA--LALGDENAVSMPVAAASNEAFKKARSLGLGDLDFSAV 280
Query: 42 FQLLK 28
+++LK
Sbjct: 281 YEVLK 285
>01_06_0663 - 30991390-30992340
Length = 316
Score = 87.4 bits (207), Expect = 9e-18
Identities = 64/194 (32%), Positives = 91/194 (46%)
Frame = -3
Query: 645 GSLXIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERS 466
G L +D +T DP + +I A K DAPVSGG GA++ATL+ AGG R
Sbjct: 107 GGLLVDMTTSDPTLAAEIAEAAAAKSCAAVDAPVSGGDRGARSATLSIFAGGDAAVVARL 166
Query: 465 LPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLN 286
PL K+MG + G G+GQ AKL N + + T + E M K GL+ L+ ++
Sbjct: 167 APLFKLMG-NALYMGGPGAGQRAKLGNQIAIASTMVGLVEGMVYAHKAGLDVAKWLEAIS 225
Query: 285 NSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAV 106
+A S S ++Y R+ GF VKDL + + +P A+
Sbjct: 226 TGAAGSKSLDLY-------GKRMLERDMAAGFYVRHFVKDLGICLSECQAMGLALPGLAL 278
Query: 105 ATQLYRIVQSRGYG 64
A QLY + + G G
Sbjct: 279 AHQLYVSLLAHGEG 292
>01_05_0431 -
22084474-22084635,22084740-22084844,22084931-22085003,
22085109-22085179,22085429-22085548,22085631-22085715,
22085812-22085867,22085978-22086053,22086546-22086611,
22086843-22087060
Length = 343
Score = 71.7 bits (168), Expect = 5e-13
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Frame = -3
Query: 645 GSLXIDSSTIDPNVPKQIFPIALEKGLGFTD-APVSGGVMGAQNATLAFMA-GGRKEDFE 472
G +D ST+D K I G F + S +G F + + +
Sbjct: 137 GKGYVDVSTVDAATSKLIGKHITSTGASFLERCDFSSCTVGPMLTRYLFSRLQFQAQKSQ 196
Query: 471 RSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDV 292
+ + + +F G +G G KL NM+MG ++ +E + + K+GL+P L++V
Sbjct: 197 QKMGCSSFLPQSRFFLGDVGKGADMKLVVNMVMGSMMVSFSEGLLLSEKVGLDPNTLVEV 256
Query: 291 LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLG 112
++ + + P+ L + Y F + KDL LA +A + IP
Sbjct: 257 ISQGA-------ISAPMFSLKGPSMVKAAYPTAFPLKHQQKDLRLALALAESVSQSIPTV 309
Query: 111 AVATQLYRIVQSRGYGQKDFSFVFQLLKRRKQ 16
A A +LY++ +S G +DFS V + LK ++Q
Sbjct: 310 AAANELYKVAKSLGLADQDFSAVIEALKAKEQ 341
>05_07_0134 - 27911920-27912762
Length = 280
Score = 67.7 bits (158), Expect = 8e-12
Identities = 49/215 (22%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Frame = -3
Query: 663 VAHAKKGSLXIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRK 484
+A + G + +D ++ P++ +++ A G D+PVSGG +GA++ LA +AGG +
Sbjct: 68 LAGLRPGGVLVDCTSSSPSLAREVAAAARAAGCYAVDSPVSGGDVGARDGALALLAGGDE 127
Query: 483 EDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKV 304
PL +G + + G GSGQ +K+ N + + + +E + GL+ +
Sbjct: 128 AVVSWLAPLFAHLG-RPTYMGPPGSGQSSKIANQIAVAGAVVGASEALAFANAAGLDAPL 186
Query: 303 LLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIR-- 130
LD ++ +A S +++ R + G + ++KDL +A G
Sbjct: 187 FLDAVSKGAAGSRVMDIF-------GERMLRREFASGGSVKYIIKDLGMALETEEGPEGA 239
Query: 129 SPIPLGAVATQLYRIVQSRGYGQKDFSFVFQLLKR 25
+P A+ Q++ + + G G + +++R
Sbjct: 240 KALPGAAMFRQMFSAMAANGDGDLSLQGLITVVER 274
>06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 59.3 bits (137), Expect = 3e-09
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 3/207 (1%)
Frame = -3
Query: 645 GSLXIDSSTIDPN-VPKQIFPIALE-KGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFE 472
G+ I SST+ P V K + E + + DAPVSGGV A TL +K +
Sbjct: 410 GTSIILSSTVSPGFVIKLKERLEAECRDIKLVDAPVSGGVKRAAEGTLT--TNMQKLVHD 467
Query: 471 RSLPLLKVMGAKQFHC-GQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLD 295
S+ + + K + G G+ K+ N +L G+ + AE M G ++ L + L +
Sbjct: 468 CSIFYVTALSEKLYVIKGGCGAASSVKMVNQLLAGVHIASAAEAMAFGARLNLRTRRLFE 527
Query: 294 VLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPL 115
++ ++ SW VP ++ +Y ++ VKDL + S + R P+ +
Sbjct: 528 IIQHARGYSWMFGNR--VPHML-----DNDYTPYSAVDIFVKDLGIVSHESSNARIPLHV 580
Query: 114 GAVATQLYRIVQSRGYGQKDFSFVFQL 34
++A QL+ + G+G+ D + V ++
Sbjct: 581 SSIAHQLFLSGSASGWGRFDDAAVVKV 607
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 34.7 bits (76), Expect = 0.067
Identities = 26/74 (35%), Positives = 35/74 (47%)
Frame = +2
Query: 356 AIPVMPINMLLVSLATCPEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKARVAF*APMT 535
++PV+PI+ L V+L + P P C A T+RR S PP R+A P
Sbjct: 56 SLPVVPIH-LPVALLSLPRCRPPPAACAAS-TVRRPAAPSPPPASPPPPPPRLALRFPRR 113
Query: 536 PPDTGASVNPSPFS 577
PP+ PS FS
Sbjct: 114 PPELPPRRRPSRFS 127
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = +2
Query: 392 SLATCPEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSP 571
S A P P++ +T R LS ++ PA +R P +PP GAS P
Sbjct: 180 SSAIPPPATAPRFPPPRAMTARTALALSPTTSASPASPSRTRLAPPRSPPAGGASGAPRR 239
Query: 572 FSKAIGKICLGTFG 613
S A C G G
Sbjct: 240 SSSAASPSCAGVEG 253
>12_02_0842 - 23588826-23589198,23589548-23590203
Length = 342
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +2
Query: 212 LDGAVGTSPGTGQYTSVDQERADELFSTSNRTFGSSPILMPMFMHSAVAIPVMPINMLLV 391
LDG G G+Y + ++ AD+L + +R ++PIL P S + + + L
Sbjct: 128 LDGDERGCAG-GRYDWLLEDFADKLVNDHHRRMMAAPILPPWMSSSPSSSSSPSVTLSLA 186
Query: 392 SLATCPEPICP 424
S A P P P
Sbjct: 187 SAAVAPAPAAP 197
>03_02_0386 +
8009884-8010133,8010274-8010338,8010545-8010658,
8010736-8010895,8010975-8011093,8011209-8011635,
8011834-8012057,8012863-8012973,8013056-8013188,
8013259-8013365,8013430-8013444,8013482-8013571,
8013855-8013917,8013973-8014053,8014136-8014208,
8014312-8014367,8014460-8014554,8014649-8014683,
8015449-8015525
Length = 764
Score = 31.1 bits (67), Expect = 0.82
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = -3
Query: 348 ECMNMGIKMGLEPKVLLDV-LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMV 172
+C++MG++ G PK+ +DV L + R +V + L+ R+YDG + E M
Sbjct: 484 KCIDMGMEFGTLPKMDVDVPLTSLHIRRTLLDVPKKIDILIVIMADDRSYDG--EIEEMC 541
Query: 171 KDLELASGMALGIRSPIPLGAVATQL-YRIVQS 76
+ L + L S L VA Q+ ++V+S
Sbjct: 542 ESLRIVYVFCLPCLSKRNLKRVARQIQLKVVKS 574
>07_01_0885 + 7353926-7354770,7354845-7355487
Length = 495
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 282 SSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLE 160
S+ R W E+YCPV ++ P+ + D + L + LE
Sbjct: 216 SAIRLWKVELYCPVVAMIMEHPAHQTKDEKLQFSLNYQHLE 256
>06_01_0080 + 644021-645463
Length = 480
Score = 29.1 bits (62), Expect = 3.3
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Frame = -3
Query: 660 AHAKKGSLXIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAGGRKE 481
AH ++G ID ++ E+GL + VSGG GA+N + M GG E
Sbjct: 92 AHLEQGDCIIDGGNEWYENTERREKAMEERGLLYLGMGVSGGEEGARNGP-SLMPGGSFE 150
Query: 480 DFERSLP-LLKV------MGAKQFHCGQIGSGQVAKLTNN 382
++ LLKV G + G+ GSG K+ +N
Sbjct: 151 AYKYIEDILLKVAAQVPDSGPCVTYIGKGGSGNFVKMVHN 190
>07_01_0552 + 4109906-4109983,4110422-4110484,4110496-4110525,
4110567-4110621,4111046-4111143,4112259-4112417,
4112518-4112577,4113436-4113624,4113749-4113802,
4113959-4114045,4114149-4114881,4115282-4115373,
4115739-4115812,4116097-4116199,4116342-4117204,
4117649-4117724,4117861-4117972,4118092-4118168,
4118272-4118352,4118710-4118789,4118860-4118875
Length = 1059
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 100 SALPHRAVQGLRPERLLVRLPATEKKKTKIR 8
S+LPH + +RP+ L + A + KK ++R
Sbjct: 1015 SSLPHSKIYRMRPQILQAAIKALDDKKRRVR 1045
>02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530
Length = 519
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 425 QWNCLAPITLRRG-RDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSPFSKA 583
+W+ AP+ G R+ + L PP A P PP A PSPF A
Sbjct: 236 RWSRAAPLPPHNGERERPRLVLDPPKRDASAT---PTPPPAEAARSRPSPFGAA 286
>10_02_0122 - 5517345-5517983
Length = 212
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 9 LIFVFFFSVAGRRTRSL--SGRSPWTARCGRAELRQRPMGSANEYPTPCH 152
L+F+F F A TR L +G P A A LR R + YP C+
Sbjct: 11 LVFLFLFFTAASATRRLDDAGGQPTAASSATAFLRSR--CATTRYPDVCY 58
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,972,125
Number of Sequences: 37544
Number of extensions: 508098
Number of successful extensions: 1634
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1624
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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