Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_P14
         (444 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    44   0.001
UniRef50_A6W593 Cluster: Transcriptional regulator, TetR family;...    33   2.1  
UniRef50_UPI0000DB775A Cluster: PREDICTED: similar to brother of...    32   4.8  
UniRef50_A5EH56 Cluster: Putative uncharacterized protein; n=1; ...    31   8.5  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 44.0 bits (99), Expect = 0.001
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -1

Query: 249 RWVDELTAHLALSGYWSP 196
           RWVDELTAHL LSGYWSP
Sbjct: 158 RWVDELTAHLVLSGYWSP 175


>UniRef50_A6W593 Cluster: Transcriptional regulator, TetR family;
           n=1; Kineococcus radiotolerans SRS30216|Rep:
           Transcriptional regulator, TetR family - Kineococcus
           radiotolerans SRS30216
          Length = 222

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 17/33 (51%), Positives = 18/33 (54%)
 Frame = -2

Query: 131 LQGLPRPSSRNALLLHGRNRRGGNTYPCGLTRG 33
           L GLPRP  R A    G  R GG T P G +RG
Sbjct: 189 LDGLPRPPGRAAGPARGTTRSGGGTRPGGGSRG 221


>UniRef50_UPI0000DB775A Cluster: PREDICTED: similar to brother of
           odd with entrails limited CG10021-PC, isoform C; n=2;
           Apocrita|Rep: PREDICTED: similar to brother of odd with
           entrails limited CG10021-PC, isoform C - Apis mellifera
          Length = 543

 Score = 32.3 bits (70), Expect = 4.8
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 334 RESSPYIPLAPNSLRDSPLPEDSHP 408
           RESS ++P+ P+ L  +P P D HP
Sbjct: 81  RESSAFVPVVPSRLHLAPYPGDMHP 105


>UniRef50_A5EH56 Cluster: Putative uncharacterized protein; n=1;
           Bradyrhizobium sp. BTAi1|Rep: Putative uncharacterized
           protein - Bradyrhizobium sp. (strain BTAi1 / ATCC
           BAA-1182)
          Length = 164

 Score = 31.5 bits (68), Expect = 8.5
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +2

Query: 59  YYRPAYFCREAVTRFGLKGG 118
           Y R AYF  EAVTRFG +GG
Sbjct: 37  YRRRAYFDYEAVTRFGARGG 56


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,330,280
Number of Sequences: 1657284
Number of extensions: 7251029
Number of successful extensions: 16104
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16104
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)