Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_P14
         (444 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35602-2|CAA84671.3|  824|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z83234-7|CAB76745.1|  667|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z82067-4|CAB76738.1|  667|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z81142-5|CAB03507.1|  319|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z35602-2|CAA84671.3|  824|Caenorhabditis elegans Hypothetical
           protein R13G10.2 protein.
          Length = 824

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -3

Query: 196 IDIYNVNAPLTLRCKF*GLTYSYKG--CPALQAETRYCFTAE 77
           I + N+N P+TL C+  G+ Y      CP +    R CFT E
Sbjct: 406 IIVGNINNPITLLCEQIGIKYRNSNFFCPLIDENGR-CFTLE 446


>Z83234-7|CAB76745.1|  667|Caenorhabditis elegans Hypothetical
           protein W03H9.4 protein.
          Length = 667

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -2

Query: 293 DYETYVSFLFYFYCVDGWTSSQPTWR*VVTGAHRHLQRKCA 171
           DYE  +  +  +  VDGW  ++  W  V   A   +Q+K A
Sbjct: 240 DYEDLIEDIKTYREVDGWAKNETWWMDVTRIAEDEIQKKAA 280


>Z82067-4|CAB76738.1|  667|Caenorhabditis elegans Hypothetical
           protein W03H9.4 protein.
          Length = 667

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -2

Query: 293 DYETYVSFLFYFYCVDGWTSSQPTWR*VVTGAHRHLQRKCA 171
           DYE  +  +  +  VDGW  ++  W  V   A   +Q+K A
Sbjct: 240 DYEDLIEDIKTYREVDGWAKNETWWMDVTRIAEDEIQKKAA 280


>Z81142-5|CAB03507.1|  319|Caenorhabditis elegans Hypothetical
           protein ZK1037.8 protein.
          Length = 319

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +3

Query: 279 ISLIVSRLLLKHDHSQSRERIFSLYSFSSEFV 374
           I+ + + L +  DH  +R ++F+LY  + E+V
Sbjct: 142 ITFVPTFLTVPQDHENARRQLFNLYPNACEYV 173


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,094,021
Number of Sequences: 27780
Number of extensions: 166231
Number of successful extensions: 302
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)