Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_P12
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical pr... 261 2e-70
Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical pr... 51 7e-07
Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 31 0.61
AC084196-2|AAK39622.1| 355|Caenorhabditis elegans Hypothetical ... 30 1.1
Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threon... 29 3.2
U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical p... 28 4.3
U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical p... 28 4.3
U80033-3|AAC48199.1| 1847|Caenorhabditis elegans Nuclear pore co... 28 5.7
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 28 5.7
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 28 5.7
Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical pr... 27 7.5
AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical
protein F28D1.7 protein.
Length = 143
Score = 261 bits (640), Expect = 2e-70
Identities = 117/142 (82%), Positives = 131/142 (92%)
Frame = -2
Query: 450 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 271
MGKP+G+ TARK HR+EQRW DK +KKAH+GT+WK+NPFGGASHAKGIVLEK+GVEAK
Sbjct: 1 MGKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAK 60
Query: 270 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 91
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN +EENDEVLV+GFGR GHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRF 120
Query: 90 KVVKVANVSLLALYKEKKERPR 25
K+VKVAN SL+AL+K KKERPR
Sbjct: 121 KIVKVANTSLIALFKGKKERPR 142
>Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical
protein T03D8.2 protein.
Length = 157
Score = 50.8 bits (116), Expect = 7e-07
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = -2
Query: 324 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 145
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G ++++E+ +VLV
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128
Query: 144 AGFGRK 127
G GR+
Sbjct: 129 KG-GRR 133
>Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical
protein T23H4.1 protein.
Length = 483
Score = 31.1 bits (67), Expect = 0.61
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 403 VVHVLTRRSYSSGFTHLDSTTPIGYG-WEKKLIGIGRPNSFKFPIVSRIKYVLAVVLH 573
+++VLT+ + S F LDS GYG + ++G G S FP+V+ + ++ H
Sbjct: 232 LMNVLTQMYFMSRFLELDSHRYYGYGIFYDLIMGKGWKESSNFPVVTYCDMQIRILGH 289
>AC084196-2|AAK39622.1| 355|Caenorhabditis elegans Hypothetical
protein Y55D5A.3 protein.
Length = 355
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/98 (25%), Positives = 38/98 (38%)
Frame = +1
Query: 106 NVTDGVTFTTESRH*YXXXXXXXXXATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYT 285
N+T V F Y +TG G + LN Y+ A+ D L+ FYT
Sbjct: 150 NITIHVDFVRNGTIQYSGLTFALYNGVLTGQRPGEYSVSLNARYSGAYIDNI--LMEFYT 207
Query: 286 NFLEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSLFT 399
F + +R E + T+ ++ F R LF+
Sbjct: 208 KFKRPVSFFIRDVLENQA----TYTEAVDAFSRTHLFS 241
>Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical
protein F15A2.6a protein.
Length = 914
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 406 VHVLTRRSYSSGFTHLDSTTPIGYGWEKKLIGIGRPNSFKFPIVSRIKYVLAVVLHSSS 582
++++ R S + T S+ P G + +G G NS+K P R + AV SSS
Sbjct: 797 INMIARHSDKTETTSATSSDPYGPSPSMRSVGSGTANSYKSPTPHR-RNTTAVTASSSS 854
>U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical
protein D2024.4 protein.
Length = 294
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 379 VRPSLFTTVVHVLTRRSYSSG 441
VRP + TTV+HV+ R SG
Sbjct: 189 VRPGIMTTVIHVMDRNPMKSG 209
>AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threonine
kinase SAD-1 protein.
Length = 914
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 406 VHVLTRRSYSSGFTHLDSTTPIGYGWEKKLIGIGRPNSFKFPIVSRIKYVLAVVLHSSS 582
++++ R S + T S+ P G + +G G NS+K P R + AV SSS
Sbjct: 797 INMIARHSDKTETTSATSSDPYGPSPSMRSVGSGTANSYKSPTPHR-RNTTAVTASSSS 854
>U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical
protein F01F1.1c protein.
Length = 641
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 415 LTRRSYSSGFTHLDSTTPIGYGWEKKLIGIGRPNSFKFP 531
L R++ SS F HL ST G + L+G+GR P
Sbjct: 143 LNRKNNSSAFPHLTSTFVPQGGGPQPLMGVGRGRGVPAP 181
>U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical
protein F01F1.1a protein.
Length = 646
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 415 LTRRSYSSGFTHLDSTTPIGYGWEKKLIGIGRPNSFKFP 531
L R++ SS F HL ST G + L+G+GR P
Sbjct: 148 LNRKNNSSAFPHLTSTFVPQGGGPQPLMGVGRGRGVPAP 186
>U80033-3|AAC48199.1| 1847|Caenorhabditis elegans Nuclear pore
complex protein protein12 protein.
Length = 1847
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 581 LLECKTTASTYLIRLTIGNLNEFGRPMPIN 492
L +C ++ T +RL IGNL P+PI+
Sbjct: 679 LFKCGSSEVTEAVRLRIGNLKSSTLPLPIH 708
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 86 TLKRTPGMSPTA*PLRPNPATSTSS 160
T RTP +P A P RP P+ S+++
Sbjct: 38 TTMRTPAATPAAPPTRPTPSRSSAA 62
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 86 TLKRTPGMSPTA*PLRPNPATSTSS 160
T RTP +P A P RP P+ S+++
Sbjct: 167 TTMRTPAATPAAPPTRPTPSRSSAA 191
>Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical
protein T23D8.9a protein.
Length = 811
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2
Query: 207 TAFVPRDGCLNHIEEN 160
T FVP+DG LN I+EN
Sbjct: 653 TPFVPKDGVLNVIDEN 668
>AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical
protein Y46E12BL.4 protein.
Length = 466
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 355 HVGFLEFFVRPSLFTTVVHVLTRRS--YSSGFTHLDSTTPIGYGWE 486
HV +E+ R VV V T+ + +++G+T L TT YGW+
Sbjct: 158 HVWQIEWPERQRGTHAVVGVATKNAPLHAAGYTALIGTTDESYGWD 203
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,315,209
Number of Sequences: 27780
Number of extensions: 322965
Number of successful extensions: 816
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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