Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_P08
(403 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0E959 Cluster: 50S ribosomal protein L34; n=2; Drosoph... 77 1e-13
UniRef50_UPI00015B4897 Cluster: PREDICTED: similar to conserved ... 73 2e-12
UniRef50_Q16ZW9 Cluster: Putative uncharacterized protein; n=1; ... 69 3e-11
UniRef50_Q7QD26 Cluster: ENSANGP00000011149; n=1; Anopheles gamb... 66 2e-10
UniRef50_UPI00003AF2FA Cluster: PREDICTED: hypothetical protein;... 53 2e-06
UniRef50_UPI0000F2CA69 Cluster: PREDICTED: similar to Mitochondr... 52 3e-06
UniRef50_UPI0000545652 Cluster: PREDICTED: hypothetical protein;... 50 2e-05
UniRef50_Q9BQ48 Cluster: 39S ribosomal protein L34, mitochondria... 49 4e-05
UniRef50_UPI00004F3980 Cluster: PREDICTED: hypothetical protein;... 48 7e-05
UniRef50_Q4SBN9 Cluster: 50S ribosomal protein L34; n=1; Tetraod... 47 1e-04
UniRef50_Q9PPN5 Cluster: 50S ribosomal protein L34; n=232; cellu... 45 5e-04
UniRef50_Q9RCA3 Cluster: 50S ribosomal protein L34; n=5; cellula... 42 0.003
UniRef50_Q8F9L6 Cluster: 50S ribosomal protein L34; n=45; cellul... 42 0.005
UniRef50_P66263 Cluster: 50S ribosomal protein L34; n=60; cellul... 41 0.008
UniRef50_Q9KVY1 Cluster: 50S ribosomal protein L34; n=14; cellul... 38 0.056
UniRef50_Q83FD9 Cluster: 50S ribosomal protein L34; n=10; Bacter... 38 0.056
UniRef50_Q97CV7 Cluster: 50S ribosomal protein L34; n=30; cellul... 38 0.056
UniRef50_Q96U95 Cluster: 50S ribosomal protein L34; n=1; Neurosp... 38 0.074
UniRef50_Q5P4P1 Cluster: 50S ribosomal protein L34; n=17; Bacter... 38 0.074
UniRef50_Q5KPZ7 Cluster: 50S ribosomal protein L34; n=1; Filobas... 37 0.17
UniRef50_O83917 Cluster: 50S ribosomal protein L34; n=62; cellul... 37 0.17
UniRef50_A4R175 Cluster: 50S ribosomal protein L34; n=1; Magnapo... 36 0.23
UniRef50_Q73JL8 Cluster: 50S ribosomal protein L34; n=5; cellula... 36 0.23
UniRef50_Q8A1F6 Cluster: 50S ribosomal protein L34; n=11; Bacter... 36 0.23
UniRef50_Q6NE95 Cluster: 50S ribosomal protein L34; n=8; Bacteri... 36 0.30
UniRef50_P68996 Cluster: 50S ribosomal protein L34; n=2; cellula... 36 0.30
UniRef50_A5DFY5 Cluster: 50S ribosomal protein L34; n=1; Pichia ... 36 0.40
UniRef50_Q6BWX0 Cluster: 50S ribosomal protein L34; n=1; Debaryo... 34 0.91
UniRef50_Q9P7L9 Cluster: Probable 60S ribosomal protein L34, mit... 34 0.91
UniRef50_Q82X98 Cluster: 50S ribosomal protein L34; n=77; cellul... 34 0.91
UniRef50_A7CT77 Cluster: Putative uncharacterized protein; n=1; ... 34 1.2
UniRef50_A6BGX4 Cluster: 50S ribosomal protein L34; n=3; Bacteri... 34 1.2
UniRef50_UPI000023CC09 Cluster: hypothetical protein FG05907.1; ... 33 1.6
UniRef50_Q6C9A1 Cluster: 50S ribosomal protein L34; n=1; Yarrowi... 33 1.6
UniRef50_A1CH71 Cluster: 50S ribosomal protein L34; n=3; Trichoc... 33 2.8
UniRef50_P78006 Cluster: 50S ribosomal protein L34; n=34; cellul... 33 2.8
UniRef50_A5KDX4 Cluster: Putative uncharacterized protein; n=1; ... 32 3.7
UniRef50_A2ESN7 Cluster: Putative uncharacterized protein; n=1; ... 32 4.9
UniRef50_O66563 Cluster: 50S ribosomal protein L34; n=61; Bacter... 31 6.4
UniRef50_A2QI19 Cluster: Similarity: shows similarity to several... 31 8.5
>UniRef50_Q0E959 Cluster: 50S ribosomal protein L34; n=2; Drosophila
melanogaster|Rep: 50S ribosomal protein L34 - Drosophila
melanogaster (Fruit fly)
Length = 81
Score = 77.4 bits (182), Expect = 1e-13
Identities = 31/51 (60%), Positives = 41/51 (80%)
Frame = -1
Query: 157 AFLLSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRH 5
AF + ++ KVRC+FP+P EVKR+ HGW+ RMSTP GRR++M R+LKGRH
Sbjct: 27 AFNRAVLKPKVRCHFPKPMEVKRINVHGWNARMSTPEGRRVLMNRILKGRH 77
>UniRef50_UPI00015B4897 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 73
Score = 73.3 bits (172), Expect = 2e-12
Identities = 30/49 (61%), Positives = 44/49 (89%)
Frame = -1
Query: 148 LSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHV 2
L+++RT++R +FPRP+E KRV +HG+ R++TPNGR+I+MRR+LKGRHV
Sbjct: 22 LTAVRTRMRYHFPRPDERKRVVQHGYFARLATPNGRKILMRRILKGRHV 70
>UniRef50_Q16ZW9 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 100
Score = 68.9 bits (161), Expect = 3e-11
Identities = 32/47 (68%), Positives = 35/47 (74%)
Frame = -1
Query: 142 SIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHV 2
S RT VR FPR E KRVR HGW R+STP GRR +MRR+LKGRHV
Sbjct: 51 SARTVVRNQFPRARETKRVRVHGWWKRLSTPEGRRTLMRRILKGRHV 97
>UniRef50_Q7QD26 Cluster: ENSANGP00000011149; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000011149 - Anopheles gambiae
str. PEST
Length = 90
Score = 66.5 bits (155), Expect = 2e-10
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = -1
Query: 157 AFLLSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHV 2
A+ L S RT +R FPR E KRVR HGW RMST GRR++MR++LKGRHV
Sbjct: 36 AWGLLSARTVIRNQFPRARETKRVRVHGWWKRMSTLAGRRVLMRKILKGRHV 87
>UniRef50_UPI00003AF2FA Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 118
Score = 53.2 bits (122), Expect = 2e-06
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = -1
Query: 256 IMSGLISTILQPLKLIRQSSIYTGVSSSLVRP-DAFLLSSIRTKVRCYFPRPNEVKRVRR 80
+ S + T + L S TG S P ++ IRTK R +PN KR R
Sbjct: 30 LRSASVLTYCRELPFSHLSLKPTGTIPSFPSPVPSWSHQQIRTKARGNEYQPNNRKRKRT 89
Query: 79 HGWDFRMSTPNGRRIIMRRLLKGR 8
HGW R+STP G +I+RR+LKGR
Sbjct: 90 HGWIKRISTPAGIEVILRRMLKGR 113
>UniRef50_UPI0000F2CA69 Cluster: PREDICTED: similar to Mitochondrial
ribosomal protein L34; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to Mitochondrial ribosomal protein
L34 - Monodelphis domestica
Length = 141
Score = 52.4 bits (120), Expect = 3e-06
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = -1
Query: 139 IRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
+R K R +P+ +KR R+HGW R+STP G ++I+RR+LKGR
Sbjct: 93 VRPKARGNEYQPSNIKRKRKHGWIRRLSTPGGIQVILRRMLKGR 136
>UniRef50_UPI0000545652 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 121
Score = 49.6 bits (113), Expect = 2e-05
Identities = 28/82 (34%), Positives = 44/82 (53%)
Frame = -1
Query: 253 MSGLISTILQPLKLIRQSSIYTGVSSSLVRPDAFLLSSIRTKVRCYFPRPNEVKRVRRHG 74
+S ++S I Q ++ V + +P + +RT R +P+ +KR R HG
Sbjct: 36 LSSVLSRSRPEQNSILQGTLNPKVEGAFQQP-LWNHQQVRTVKRGTEYQPSNIKRKRTHG 94
Query: 73 WDFRMSTPNGRRIIMRRLLKGR 8
W R+STP G +I+RR+LKGR
Sbjct: 95 WIKRISTPGGIEVILRRMLKGR 116
>UniRef50_Q9BQ48 Cluster: 39S ribosomal protein L34, mitochondrial
precursor; n=10; Eutheria|Rep: 39S ribosomal protein
L34, mitochondrial precursor - Homo sapiens (Human)
Length = 92
Score = 48.8 bits (111), Expect = 4e-05
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Frame = -1
Query: 163 PDAFLLSS---IRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
PDA+ L + R K R +P+ +KR +HGW R+STP G ++I+RR+LKGR
Sbjct: 33 PDAWGLPTPQQARGKARGNEYQPSNIKRKNKHGWVRRLSTPAGVQVILRRMLKGR 87
>UniRef50_UPI00004F3980 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 96
Score = 48.0 bits (109), Expect = 7e-05
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = -1
Query: 151 LLSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
++ R + R +P+ +KR +HGW R+STPNG ++I+RR+ KGR
Sbjct: 44 VIQQTRGRTRGNEYQPSNIKRKNKHGWIRRLSTPNGVQVILRRMHKGR 91
>UniRef50_Q4SBN9 Cluster: 50S ribosomal protein L34; n=1; Tetraodon
nigroviridis|Rep: 50S ribosomal protein L34 - Tetraodon
nigroviridis (Green puffer)
Length = 118
Score = 47.2 bits (107), Expect = 1e-04
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = -1
Query: 178 SSLVRPDAFLLSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
S + + A+ +RT+ R +P +KR R HGW R+S+ G +++RR+LKGR
Sbjct: 57 SGVFQQPAWQYQQVRTRKRGTEYQPKNIKRKRTHGWIKRLSSKGGIEVLLRRMLKGR 113
>UniRef50_Q9PPN5 Cluster: 50S ribosomal protein L34; n=232; cellular
organisms|Rep: 50S ribosomal protein L34 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 48
Score = 45.2 bits (102), Expect = 5e-04
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRH 5
+PN KR + HG+ RM T NGR ++ RR LKGRH
Sbjct: 6 QPNNRKRAKVHGFRARMKTKNGRNVLARRRLKGRH 40
>UniRef50_Q9RCA3 Cluster: 50S ribosomal protein L34; n=5; cellular
organisms|Rep: 50S ribosomal protein L34 - Bacillus
halodurans
Length = 45
Score = 42.3 bits (95), Expect = 0.003
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHV 2
+PN KR + HG+ RMST NGR+++ RR KGR V
Sbjct: 7 QPNNRKRKKVHGFRARMSTKNGRKVLARRRKKGRKV 42
>UniRef50_Q8F9L6 Cluster: 50S ribosomal protein L34; n=45; cellular
organisms|Rep: 50S ribosomal protein L34 - Leptospira
interrogans
Length = 53
Score = 41.9 bits (94), Expect = 0.005
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRH 5
+P+ VKR R HG+ RM+T GR+++ RR KGR+
Sbjct: 6 QPSRVKRARTHGFRARMATAGGRKVLSRRRKKGRY 40
>UniRef50_P66263 Cluster: 50S ribosomal protein L34; n=60; cellular
organisms|Rep: 50S ribosomal protein L34 - Xylella
fastidiosa
Length = 46
Score = 41.1 bits (92), Expect = 0.008
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
+P+ +KR R HG+ RMST +GR+I+ RR KGR
Sbjct: 8 QPSNLKRKRDHGFRARMSTADGRKILARRRAKGR 41
>UniRef50_Q9KVY1 Cluster: 50S ribosomal protein L34; n=14; cellular
organisms|Rep: 50S ribosomal protein L34 - Vibrio
cholerae
Length = 45
Score = 38.3 bits (85), Expect = 0.056
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
+P+ +KR R HG+ RM+T NGR+++ R KGR
Sbjct: 7 QPSVLKRKRTHGFRARMATANGRKVLNARRAKGR 40
>UniRef50_Q83FD9 Cluster: 50S ribosomal protein L34; n=10;
Bacteria|Rep: 50S ribosomal protein L34 - Tropheryma
whipplei (strain Twist) (Whipple's bacillus)
Length = 45
Score = 38.3 bits (85), Expect = 0.056
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
+PN+ KR++ HG+ RMST +GRRII R K R
Sbjct: 7 QPNKRKRLKTHGFRSRMSTASGRRIISCRRRKNR 40
>UniRef50_Q97CV7 Cluster: 50S ribosomal protein L34; n=30; cellular
organisms|Rep: 50S ribosomal protein L34 - Clostridium
acetobutylicum
Length = 44
Score = 38.3 bits (85), Expect = 0.056
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
+P + +R + HG+ RMST +GR+++ RR LKGR
Sbjct: 6 QPKKKQRKKEHGFRKRMSTLSGRKVLKRRRLKGR 39
>UniRef50_Q96U95 Cluster: 50S ribosomal protein L34; n=1; Neurospora
crassa|Rep: 50S ribosomal protein L34 - Neurospora
crassa
Length = 140
Score = 37.9 bits (84), Expect = 0.074
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = -1
Query: 148 LSSIRTKVRCYFPRPN-----EVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
LS + +++RC PRP + + RRHG+ R+ T NG++ + RRL KGR
Sbjct: 85 LSGLGSQIRCG-PRPTMSGATRLVQKRRHGFLSRVKTKNGQKTLKRRLAKGR 135
>UniRef50_Q5P4P1 Cluster: 50S ribosomal protein L34; n=17;
Bacteria|Rep: 50S ribosomal protein L34 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 44
Score = 37.9 bits (84), Expect = 0.074
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRH 5
+P+ V+R R HG+ RM T GR +I R KGRH
Sbjct: 6 QPSVVRRKRTHGFLVRMKTRGGRAVIRARRAKGRH 40
>UniRef50_Q5KPZ7 Cluster: 50S ribosomal protein L34; n=1;
Filobasidiella neoformans|Rep: 50S ribosomal protein L34
- Cryptococcus neoformans (Filobasidiella neoformans)
Length = 129
Score = 36.7 bits (81), Expect = 0.17
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = -1
Query: 148 LSSIRTKVRCYFPRPNEVKRVRRHGWDFRMST-PNGRRIIMRRLLKGR 8
L ++R F +P++ KR +HG+ R+ NGR+ ++RRLLKGR
Sbjct: 77 LGALRHVAMGAFYQPSQRKRKNKHGFLSRLKGGKNGRKTLLRRLLKGR 124
>UniRef50_O83917 Cluster: 50S ribosomal protein L34; n=62; cellular
organisms|Rep: 50S ribosomal protein L34 - Treponema
pallidum
Length = 51
Score = 36.7 bits (81), Expect = 0.17
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
+P+ KRVR+ G+ RM+T GR I+ RR KGR
Sbjct: 6 QPSRRKRVRKFGFRARMATRGGRAILRRRRAKGR 39
>UniRef50_A4R175 Cluster: 50S ribosomal protein L34; n=1;
Magnaporthe grisea|Rep: 50S ribosomal protein L34 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 145
Score = 36.3 bits (80), Expect = 0.23
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -1
Query: 148 LSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
L IR R R + +KR R+HG+ + T GR+++ RR KGR
Sbjct: 94 LGQIRCGPRPTTARTSRLKRARKHGFLVKTRTAKGRKMLARRQAKGR 140
>UniRef50_Q73JL8 Cluster: 50S ribosomal protein L34; n=5; cellular
organisms|Rep: 50S ribosomal protein L34 - Treponema
denticola
Length = 51
Score = 36.3 bits (80), Expect = 0.23
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
+P++ KRVRR G+ M T GR ++ RR KGR
Sbjct: 6 QPSKTKRVRRFGFRALMKTKGGRAVLSRRRAKGR 39
>UniRef50_Q8A1F6 Cluster: 50S ribosomal protein L34; n=11;
Bacteria|Rep: 50S ribosomal protein L34 - Bacteroides
thetaiotaomicron
Length = 53
Score = 36.3 bits (80), Expect = 0.23
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
+P+ KR +HG+ RM++ NGRR++ R KGR
Sbjct: 6 QPSNRKRKNKHGFRERMASANGRRVLAARRAKGR 39
>UniRef50_Q6NE95 Cluster: 50S ribosomal protein L34; n=8;
Bacteria|Rep: 50S ribosomal protein L34 -
Corynebacterium diphtheriae
Length = 47
Score = 35.9 bits (79), Expect = 0.30
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
+PN +R R+HG+ RM T GR I+ R KGR
Sbjct: 9 QPNNRRRARKHGFRIRMRTRAGRAIVAARRNKGR 42
>UniRef50_P68996 Cluster: 50S ribosomal protein L34; n=2; cellular
organisms|Rep: 50S ribosomal protein L34 - Agrobacterium
tumefaciens (strain C58 / ATCC 33970)
Length = 45
Score = 35.9 bits (79), Expect = 0.30
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
+P+++ R RRHG+ RM+T GR+++ R +GR
Sbjct: 7 QPSKLVRKRRHGFRARMATAGGRKVLAARRARGR 40
>UniRef50_A5DFY5 Cluster: 50S ribosomal protein L34; n=1; Pichia
guilliermondii|Rep: 50S ribosomal protein L34 - Pichia
guilliermondii (Yeast) (Candida guilliermondii)
Length = 111
Score = 35.5 bits (78), Expect = 0.40
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1
Query: 136 RTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
R K R +P+ +KR R G+ R+ T NGR+I+ RR KGR
Sbjct: 64 RFKSRGNTYQPSTLKRKRTFGFLARLRTRNGRKILARRKAKGR 106
>UniRef50_Q6BWX0 Cluster: 50S ribosomal protein L34; n=1;
Debaryomyces hansenii|Rep: 50S ribosomal protein L34 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 122
Score = 34.3 bits (75), Expect = 0.91
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = -1
Query: 136 RTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
R K R +P+ +KR R G+ R+ + NGR+I+ RR KGR
Sbjct: 75 RFKSRGNSYQPSTLKRKRTFGFLARLRSKNGRKILSRRKAKGR 117
>UniRef50_Q9P7L9 Cluster: Probable 60S ribosomal protein L34,
mitochondrial precursor; n=1; Schizosaccharomyces
pombe|Rep: Probable 60S ribosomal protein L34,
mitochondrial precursor - Schizosaccharomyces pombe
(Fission yeast)
Length = 108
Score = 34.3 bits (75), Expect = 0.91
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
+P+ KR R+HG+ R+ + NGRR++ R KGR
Sbjct: 70 QPSNRKRKRKHGFLSRIRSVNGRRVLRDRRQKGR 103
>UniRef50_Q82X98 Cluster: 50S ribosomal protein L34; n=77; cellular
organisms|Rep: 50S ribosomal protein L34 - Nitrosomonas
europaea
Length = 44
Score = 34.3 bits (75), Expect = 0.91
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
+P+ + R R HG+ RM T GR +I R KGR
Sbjct: 6 QPSVISRKRTHGFRVRMKTRGGRAVIRARRAKGR 39
>UniRef50_A7CT77 Cluster: Putative uncharacterized protein; n=1;
Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
protein - Opitutaceae bacterium TAV2
Length = 218
Score = 33.9 bits (74), Expect = 1.2
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = -1
Query: 286 FVSVEKVTVNIMSGLISTILQPLKLIRQSSIYTGVSSSLVRPDAFLLSSIRTKVRCYFPR 107
F +E +TV ++ G+++ I+ P+ + + S T S +R A + R + R FP+
Sbjct: 16 FTLIELLTVIVIIGILAAIIIPVTIKVRESAKTARCRSNIRQIALYMLMYRDENRNKFPK 75
Query: 106 PN 101
PN
Sbjct: 76 PN 77
>UniRef50_A6BGX4 Cluster: 50S ribosomal protein L34; n=3;
Bacteria|Rep: 50S ribosomal protein L34 - Dorea
longicatena DSM 13814
Length = 61
Score = 33.9 bits (74), Expect = 1.2
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
+P + +R + HG+ RMST GR+++ R KGR
Sbjct: 23 QPKKRQRAKVHGFRSRMSTAGGRKVLAARRAKGR 56
>UniRef50_UPI000023CC09 Cluster: hypothetical protein FG05907.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG05907.1 - Gibberella zeae PH-1
Length = 125
Score = 33.5 bits (73), Expect = 1.6
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -1
Query: 85 RRHGWDFRMSTPNGRRIIMRRLLKGR 8
RRHG+ R + GRRI++RR +KGR
Sbjct: 95 RRHGFLVRKRSKTGRRILLRRKIKGR 120
>UniRef50_Q6C9A1 Cluster: 50S ribosomal protein L34; n=1; Yarrowia
lipolytica|Rep: 50S ribosomal protein L34 - Yarrowia
lipolytica (Candida lipolytica)
Length = 88
Score = 33.5 bits (73), Expect = 1.6
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -1
Query: 202 SSIYTGVSSSLVRPDAFLLSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRR 23
S++ G +++L F +S R VR +P+ KR R G+ R + GR+II RR
Sbjct: 19 SALAQGSTATLPFLTPFSGASQRRYVRGIDYQPSVRKRKRSLGFLARSRSRTGRKIIKRR 78
Query: 22 LLKGR 8
LKGR
Sbjct: 79 TLKGR 83
>UniRef50_A1CH71 Cluster: 50S ribosomal protein L34; n=3;
Trichocomaceae|Rep: 50S ribosomal protein L34 -
Aspergillus clavatus
Length = 131
Score = 32.7 bits (71), Expect = 2.8
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 106 PNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
P+ + RRHG+ R+ T GR+++M R KGR
Sbjct: 94 PSRRVQKRRHGFLSRLRTRGGRKVLMHRRAKGR 126
>UniRef50_P78006 Cluster: 50S ribosomal protein L34; n=34; cellular
organisms|Rep: 50S ribosomal protein L34 - Mycoplasma
pneumoniae
Length = 48
Score = 32.7 bits (71), Expect = 2.8
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -1
Query: 109 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
+P+++KR + HG+ RM+T +GR+++ R K R
Sbjct: 6 QPSKLKRAKTHGFLARMATASGRKVLKLRRKKQR 39
>UniRef50_A5KDX4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 730
Score = 32.3 bits (70), Expect = 3.7
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = -1
Query: 274 EKVTVNIMSGLISTILQPLKLIRQSSIYTGVSSSLVRPDAFLLSSIRTKVRCYFPRPNEV 95
E+ VN+ S I ILQ KL +Q + +++ F+L R KVR +F PN V
Sbjct: 542 EEAKVNLRSNSIDEILQHRKLEQQKRFLKNIHQNVLH--MFILDFER-KVRTFFSLPN-V 597
Query: 94 KRVRR 80
+R++R
Sbjct: 598 ERLKR 602
>UniRef50_A2ESN7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 486
Score = 31.9 bits (69), Expect = 4.9
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -3
Query: 254 HVRTNFNNPPTPKTH*AIINLHRSELEFSE--TRCVFVVLN 138
HV+ NFN P PK H + L + EF+E RC+ + L+
Sbjct: 261 HVKINFNMTPDPKIHKMLFKLAIAFPEFTECTKRCIIIRLD 301
>UniRef50_O66563 Cluster: 50S ribosomal protein L34; n=61;
Bacteria|Rep: 50S ribosomal protein L34 - Aquifex
aeolicus
Length = 47
Score = 31.5 bits (68), Expect = 6.4
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -1
Query: 94 KRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
K+ R+ G+ RM T +GR+II RR KGR
Sbjct: 14 KKKRKSGFLARMRTKSGRKIIARRRRKGR 42
>UniRef50_A2QI19 Cluster: Similarity: shows similarity to several
undescribed fungal ribosomal protein L34. precursor;
n=2; Aspergillus|Rep: Similarity: shows similarity to
several undescribed fungal ribosomal protein L34.
precursor - Aspergillus niger
Length = 141
Score = 31.1 bits (67), Expect = 8.5
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -1
Query: 106 PNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 8
P+ + RRHG+ R+ + GR+I++RR +GR
Sbjct: 104 PSRRVQKRRHGFLARLRSRGGRKILLRRRARGR 136
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,234,824
Number of Sequences: 1657284
Number of extensions: 5686022
Number of successful extensions: 11566
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 11395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11564
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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